RNA–Protein interactions for RNA: ENST00000396654.6

AP1S3-203, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene AP1S3, Length 830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-203ENST00000396654 UTP14AQ9BVJ6 771 aaKnown RBP21.9■■□□□ 1.1
AP1S3-203ENST00000396654 CCDC88AQ3V6T2 1871 aa21.9■■□□□ 1.1
AP1S3-203ENST00000396654 SLC4A2P04920 1241 aa21.89■■□□□ 1.09
AP1S3-203ENST00000396654 CHMP4AQ9BY43 222 aa21.89■■□□□ 1.09
AP1S3-203ENST00000396654 IBTKQ9P2D0 1353 aaPredicted RBP21.88■■□□□ 1.09
AP1S3-203ENST00000396654 SRGNP10124 158 aa21.88■■□□□ 1.09
AP1S3-203ENST00000396654 SYNE4Q8N205 404 aa21.88■■□□□ 1.09
AP1S3-203ENST00000396654 MYD88Q99836 296 aa21.88■■□□□ 1.09
AP1S3-203ENST00000396654 PDZRN3Q9UPQ7 1066 aa21.88■■□□□ 1.09
AP1S3-203ENST00000396654 DDX58O95786 925 aaKnown RBP21.87■■□□□ 1.09
AP1S3-203ENST00000396654 RTL5Q5HYW3 569 aaPredicted RBP21.87■■□□□ 1.09
AP1S3-203ENST00000396654 MASTLQ96GX5 879 aa21.87■■□□□ 1.09
AP1S3-203ENST00000396654 TRMT112Q9UI30 125 aaKnown RBP21.87■■□□□ 1.09
AP1S3-203ENST00000396654 DDX60Q8IY21 1712 aaKnown RBP21.86■■□□□ 1.09
AP1S3-203ENST00000396654 SBF1O95248 1867 aa21.86■■□□□ 1.09
AP1S3-203ENST00000396654 STYK1Q6J9G0 422 aa21.86■■□□□ 1.09
AP1S3-203ENST00000396654 C3orf67Q6ZVT6 689 aa21.86■■□□□ 1.09
AP1S3-203ENST00000396654 ISCA1Q9BUE6 129 aa21.86■■□□□ 1.09
AP1S3-203ENST00000396654 MAP3K2Q9Y2U5 619 aa21.86■■□□□ 1.09
AP1S3-203ENST00000396654 E9PSI1 815 aa21.85■■□□□ 1.09
AP1S3-203ENST00000396654 NPR1P16066 1061 aa21.85■■□□□ 1.09
AP1S3-203ENST00000396654 SLFN5Q08AF3 891 aa21.85■■□□□ 1.09
AP1S3-203ENST00000396654 CNKSR1Q969H4 720 aa21.85■■□□□ 1.09
AP1S3-203ENST00000396654 TAF1P21675 1872 aa21.85■■□□□ 1.09
AP1S3-203ENST00000396654 PI4KAP2A4QPH2 592 aa21.84■■□□□ 1.09
AP1S3-203ENST00000396654 C21orf2O43822 256 aa21.84■■□□□ 1.09
AP1S3-203ENST00000396654 HCLS1P14317 486 aaPredicted RBP21.84■■□□□ 1.09
AP1S3-203ENST00000396654 RASSF7Q02833 373 aa21.84■■□□□ 1.09
AP1S3-203ENST00000396654 PRPF40BQ6NWY9 871 aaKnown RBP21.84■■□□□ 1.09
AP1S3-203ENST00000396654 PI4KAP1Q8N8J0 262 aa21.84■■□□□ 1.09
AP1S3-203ENST00000396654 ADCY9O60503 1353 aa21.84■■□□□ 1.09
AP1S3-203ENST00000396654 SH3TC1Q8TE82 1336 aa21.83■■□□□ 1.09
AP1S3-203ENST00000396654 FLIIQ13045 1269 aa21.83■■□□□ 1.09
AP1S3-203ENST00000396654 RPGRQ92834 1020 aaKnown RBP21.83■■□□□ 1.09
AP1S3-203ENST00000396654 FER1L6Q2WGJ9 1857 aa21.82■■□□□ 1.08
AP1S3-203ENST00000396654 KLRG2A4D1S0 409 aaPredicted RBP21.82■■□□□ 1.08
AP1S3-203ENST00000396654 HNRNPUQ00839 825 aaKnown RBP eCLIP21.82■■□□□ 1.08
AP1S3-203ENST00000396654 FKBP5Q13451 457 aaPredicted RBP21.82■■□□□ 1.08
AP1S3-203ENST00000396654 KSR2Q6VAB6 950 aa21.82■■□□□ 1.08
AP1S3-203ENST00000396654 JARID2Q92833 1246 aaPredicted RBP21.82■■□□□ 1.08
AP1S3-203ENST00000396654 FAM89AQ96GI7 184 aa21.82■■□□□ 1.08
AP1S3-203ENST00000396654 METTL22Q9BUU2 404 aaPredicted RBP21.82■■□□□ 1.08
AP1S3-203ENST00000396654 RIC1Q4ADV7 1423 aa21.81■■□□□ 1.08
AP1S3-203ENST00000396654 NLRP3Q96P20 1036 aa21.81■■□□□ 1.08
AP1S3-203ENST00000396654 CRY2Q49AN0 593 aa21.79■■□□□ 1.08
AP1S3-203ENST00000396654 SLC10A5Q5PT55 438 aa21.79■■□□□ 1.08
AP1S3-203ENST00000396654 OLFM4Q6UX06 510 aa21.79■■□□□ 1.08
AP1S3-203ENST00000396654 ZNF784Q8NCA9 323 aaPredicted RBP21.79■■□□□ 1.08
AP1S3-203ENST00000396654 RNF123Q5XPI4 1314 aa21.79■■□□□ 1.08
AP1S3-203ENST00000396654 C9orf131Q5VYM1 1079 aa21.78■■□□□ 1.08
AP1S3-203ENST00000396654 ZNF526Q8TF50 670 aaPredicted RBP21.78■■□□□ 1.08
AP1S3-203ENST00000396654 GOLGB1Q14789 3259 aaKnown RBP21.78■■□□□ 1.08
AP1S3-203ENST00000396654 F6X3S4 739 aa21.77■■□□□ 1.08
AP1S3-203ENST00000396654 NEXNQ0ZGT2 675 aa21.77■■□□□ 1.08
AP1S3-203ENST00000396654 TRIM28Q13263 835 aaKnown RBP21.77■■□□□ 1.08
AP1S3-203ENST00000396654 CWF19L2Q2TBE0 894 aaKnown RBP21.77■■□□□ 1.08
AP1S3-203ENST00000396654 SLC51AQ86UW1 340 aa21.77■■□□□ 1.08
AP1S3-203ENST00000396654 RBM17Q96I25 401 aaKnown RBP21.77■■□□□ 1.08
AP1S3-203ENST00000396654 BCL2L13Q9BXK5 485 aa21.77■■□□□ 1.08
AP1S3-203ENST00000396654 CWC25Q9NXE8 425 aaPredicted RBP21.77■■□□□ 1.08
AP1S3-203ENST00000396654 RNF181Q9P0P0 153 aa21.77■■□□□ 1.08
AP1S3-203ENST00000396654 NFKBIEO00221 500 aa21.76■■□□□ 1.07
AP1S3-203ENST00000396654 IGKV5-2P06315 115 aa21.76■■□□□ 1.07
AP1S3-203ENST00000396654 ALDH1B1P30837 517 aa21.76■■□□□ 1.07
AP1S3-203ENST00000396654 CCDC191Q8NCU4 936 aa21.76■■□□□ 1.07
AP1S3-203ENST00000396654 TIAM2Q8IVF5 1701 aa21.75■■□□□ 1.07
AP1S3-203ENST00000396654 IRS4O14654 1257 aaPredicted RBP21.75■■□□□ 1.07
AP1S3-203ENST00000396654 DNAAF4Q8WXU2 420 aa21.75■■□□□ 1.07
AP1S3-203ENST00000396654 MYH3P11055 1940 aa21.74■■□□□ 1.07
AP1S3-203ENST00000396654 PRELPP51888 382 aa21.74■■□□□ 1.07
AP1S3-203ENST00000396654 TRMT2AQ8IZ69 625 aaKnown RBP21.74■■□□□ 1.07
AP1S3-203ENST00000396654 ZBTB38Q8NAP3 1195 aaPredicted RBP21.74■■□□□ 1.07
AP1S3-203ENST00000396654 DICER1Q9UPY3 1922 aaKnown RBP21.74■■□□□ 1.07
AP1S3-203ENST00000396654 NEURL1BA8MQ27 555 aa21.73■■□□□ 1.07
AP1S3-203ENST00000396654 HOXA10P31260 410 aaPredicted RBP21.73■■□□□ 1.07
AP1S3-203ENST00000396654 CCDC93Q567U6 631 aa21.73■■□□□ 1.07
AP1S3-203ENST00000396654 C7orf43Q8WVR3 580 aa21.73■■□□□ 1.07
AP1S3-203ENST00000396654 ABCC4O15439 1325 aa21.73■■□□□ 1.07
AP1S3-203ENST00000396654 UTRNP46939 3433 aa21.72■■□□□ 1.07
AP1S3-203ENST00000396654 PPEF1O14829 653 aaPredicted RBP21.72■■□□□ 1.07
AP1S3-203ENST00000396654 PCCAP05165 728 aaPredicted RBP21.72■■□□□ 1.07
AP1S3-203ENST00000396654 MRPL50Q8N5N7 158 aaKnown RBP21.72■■□□□ 1.07
AP1S3-203ENST00000396654 SSH1Q8WYL5 1049 aa21.72■■□□□ 1.07
AP1S3-203ENST00000396654 CRAMP1Q96RY5 1269 aa21.72■■□□□ 1.07
AP1S3-203ENST00000396654 COL4A1P02462 1669 aa21.72■■□□□ 1.07
AP1S3-203ENST00000396654 SLC4A10Q6U841 1118 aa21.71■■□□□ 1.07
AP1S3-203ENST00000396654 DDX46Q7L014 1031 aaKnown RBP21.71■■□□□ 1.07
AP1S3-203ENST00000396654 CCDC85AQ96PX6 553 aaPredicted RBP21.71■■□□□ 1.07
AP1S3-203ENST00000396654 TAOK3Q9H2K8 898 aa21.71■■□□□ 1.07
AP1S3-203ENST00000396654 SPEF2Q9C093 1822 aa21.71■■□□□ 1.07
AP1S3-203ENST00000396654 LMNB1P20700 586 aa21.7■■□□□ 1.06
AP1S3-203ENST00000396654 SOGA3Q5TF21 947 aa21.7■■□□□ 1.06
AP1S3-203ENST00000396654 UBE3BQ7Z3V4 1068 aa21.69■■□□□ 1.06
AP1S3-203ENST00000396654 SMC4Q9NTJ3 1288 aa21.69■■□□□ 1.06
AP1S3-203ENST00000396654 GCKRQ14397 625 aa21.68■■□□□ 1.06
AP1S3-203ENST00000396654 LINS1Q8NG48 757 aa21.68■■□□□ 1.06
AP1S3-203ENST00000396654 PDE8AO60658 829 aa21.67■■□□□ 1.06
AP1S3-203ENST00000396654 GRAPQ13588 217 aa21.67■■□□□ 1.06
AP1S3-203ENST00000396654 SF3B3Q15393 1217 aaKnown RBP21.67■■□□□ 1.06
AP1S3-203ENST00000396654 GRAPLQ8TC17 118 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms