RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 ZBTB38Q8NAP3 1195 aaPredicted RBP14.67□□□□□ -0.06
GTF2A2-202ENST00000396060 CDHR2Q9BYE9 1310 aa14.67□□□□□ -0.06
GTF2A2-202ENST00000396060 USP42Q9H9J4 1324 aaKnown RBP14.67□□□□□ -0.06
GTF2A2-202ENST00000396060 GSPT1P15170 499 aaKnown RBP14.66□□□□□ -0.06
GTF2A2-202ENST00000396060 RBM6P78332 1123 aaKnown RBP14.66□□□□□ -0.06
GTF2A2-202ENST00000396060 PTF1AQ7RTS3 328 aa14.66□□□□□ -0.06
GTF2A2-202ENST00000396060 NLRP10Q86W26 655 aa14.66□□□□□ -0.06
GTF2A2-202ENST00000396060 NUP98P52948 1817 aa14.66□□□□□ -0.06
GTF2A2-202ENST00000396060 APBB1O00213 710 aa14.65□□□□□ -0.06
GTF2A2-202ENST00000396060 MX1P20591 662 aa14.65□□□□□ -0.06
GTF2A2-202ENST00000396060 G3BP1Q13283 466 aaKnown RBP eCLIP14.65□□□□□ -0.06
GTF2A2-202ENST00000396060 FAM196AQ6ZSG2 479 aa14.65□□□□□ -0.06
GTF2A2-202ENST00000396060 LINC00116Q8NCU8 138 aa14.65□□□□□ -0.06
GTF2A2-202ENST00000396060 ANKRD36CQ5JPF3 1778 aa14.65□□□□□ -0.06
GTF2A2-202ENST00000396060 CAMTA2O94983 1202 aa14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 SEC24BO95487 1268 aa14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 CSF1RP07333 972 aa14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 PTPN12Q05209 780 aaKnown RBP14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 CLEC4GQ6UXB4 293 aa14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 AK7Q96M32 723 aa14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 ZNF330Q9Y3S2 320 aaPredicted RBP14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 ANP32AP39687 249 aaKnown RBP14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 LMBR1LQ6UX01 489 aa14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 KRT27Q7Z3Y8 459 aa14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 FBXO3Q9UK99 471 aa14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 TBC1D2BQ9UPU7 963 aa14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 PA2G4Q9UQ80 394 aaKnown RBP14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 LY75O60449 1722 aa14.64□□□□□ -0.07
GTF2A2-202ENST00000396060 CDC45O75419 566 aa14.63□□□□□ -0.07
GTF2A2-202ENST00000396060 RPS6KA4O75676 772 aa14.63□□□□□ -0.07
GTF2A2-202ENST00000396060 SASH1O94885 1247 aa14.63□□□□□ -0.07
GTF2A2-202ENST00000396060 HMGB2P26583 209 aaKnown RBP14.63□□□□□ -0.07
GTF2A2-202ENST00000396060 PARP10Q53GL7 1025 aa14.63□□□□□ -0.07
GTF2A2-202ENST00000396060 CLASRPQ8N2M8 674 aaKnown RBP14.63□□□□□ -0.07
GTF2A2-202ENST00000396060 JARID2Q92833 1246 aaPredicted RBP14.63□□□□□ -0.07
GTF2A2-202ENST00000396060 TTC41PQ6P2S7 1318 aa14.62□□□□□ -0.07
GTF2A2-202ENST00000396060 OS9Q13438 667 aaPredicted RBP14.62□□□□□ -0.07
GTF2A2-202ENST00000396060 IL1RAPL2Q9NP60 686 aa14.62□□□□□ -0.07
GTF2A2-202ENST00000396060 CIAO1O76071 339 aa14.61□□□□□ -0.07
GTF2A2-202ENST00000396060 SDSP20132 328 aa14.61□□□□□ -0.07
GTF2A2-202ENST00000396060 FAM182BQ5T319 152 aa14.61□□□□□ -0.07
GTF2A2-202ENST00000396060 UPF2Q9HAU5 1272 aaKnown RBP14.61□□□□□ -0.07
GTF2A2-202ENST00000396060 TBC1D9Q6ZT07 1266 aa14.6□□□□□ -0.07
GTF2A2-202ENST00000396060 ARXQ96QS3 562 aa14.6□□□□□ -0.07
GTF2A2-202ENST00000396060 GPR108Q9NPR9 543 aa14.6□□□□□ -0.07
GTF2A2-202ENST00000396060 CCNL1Q9UK58 526 aaPredicted RBP14.6□□□□□ -0.07
GTF2A2-202ENST00000396060 ZNF652Q9Y2D9 606 aa14.6□□□□□ -0.07
GTF2A2-202ENST00000396060 UBN2Q6ZU65 1347 aa14.6□□□□□ -0.07
GTF2A2-202ENST00000396060 BRWD3Q6RI45 1802 aa14.6□□□□□ -0.07
GTF2A2-202ENST00000396060 PI4K2BQ8TCG2 481 aa14.6□□□□□ -0.07
GTF2A2-202ENST00000396060 FAM89AQ96GI7 184 aa14.6□□□□□ -0.07
GTF2A2-202ENST00000396060 TBC1D32Q96NH3 1257 aa14.6□□□□□ -0.07
GTF2A2-202ENST00000396060 TUBGCP6Q96RT7 1819 aa14.59□□□□□ -0.07
GTF2A2-202ENST00000396060 HSP90B1P14625 803 aaKnown RBP14.59□□□□□ -0.07
GTF2A2-202ENST00000396060 GPTP24298 496 aa14.59□□□□□ -0.07
GTF2A2-202ENST00000396060 SLC27A3Q5K4L6 730 aa14.59□□□□□ -0.07
GTF2A2-202ENST00000396060 IPO9Q96P70 1041 aaKnown RBP14.59□□□□□ -0.07
GTF2A2-202ENST00000396060 NARFQ9UHQ1 456 aa14.59□□□□□ -0.07
GTF2A2-202ENST00000396060 TRMT112Q9UI30 125 aaKnown RBP14.59□□□□□ -0.07
GTF2A2-202ENST00000396060 TAF1LQ8IZX4 1826 aa14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 EYA2O00167 538 aa14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 PDE8AO60658 829 aa14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 IL15P40933 162 aaPredicted RBP14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 ATG9AQ7Z3C6 839 aa14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 NUTM1Q86Y26 1132 aa14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 TTLL11Q8NHH1 800 aa14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 EAF2Q96CJ1 260 aaPredicted RBP14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 UTP14AQ9BVJ6 771 aaKnown RBP14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 ECHDC1Q9NTX5 307 aa14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 BCORQ6W2J9 1755 aa14.58□□□□□ -0.08
GTF2A2-202ENST00000396060 IRS4O14654 1257 aaPredicted RBP14.57□□□□□ -0.08
GTF2A2-202ENST00000396060 ERC2O15083 957 aa14.57□□□□□ -0.08
GTF2A2-202ENST00000396060 GLRX3O76003 335 aaKnown RBP14.57□□□□□ -0.08
GTF2A2-202ENST00000396060 SUSD4Q5VX71 490 aa14.57□□□□□ -0.08
GTF2A2-202ENST00000396060 KLHDC4Q8TBB5 520 aa14.57□□□□□ -0.08
GTF2A2-202ENST00000396060 GPATCH3Q96I76 525 aa14.57□□□□□ -0.08
GTF2A2-202ENST00000396060 SH3TC1Q8TE82 1336 aa14.57□□□□□ -0.08
GTF2A2-202ENST00000396060 IFIT2P09913 472 aaKnown RBP14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 CCDC57Q2TAC2 916 aa14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 RTL5Q5HYW3 569 aaPredicted RBP14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 FBXO41Q8TF61 875 aa14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 DDRGK1Q96HY6 314 aa14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 ADRA2BP18089 450 aa14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 RBM25P49756 843 aaKnown RBP14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 CTSWP56202 376 aa14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 CASC1Q6TDU7 716 aa14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 AACSQ86V21 672 aa14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 SIL1Q9H173 461 aa14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 RTCBQ9Y3I0 505 aaKnown RBP14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.56□□□□□ -0.08
GTF2A2-202ENST00000396060 RTL9Q8NET4 1388 aa14.55□□□□□ -0.08
GTF2A2-202ENST00000396060 NTSR2O95665 410 aa14.55□□□□□ -0.08
GTF2A2-202ENST00000396060 RXRBP28702 533 aa14.55□□□□□ -0.08
GTF2A2-202ENST00000396060 TFCP2Q12800 502 aa14.55□□□□□ -0.08
GTF2A2-202ENST00000396060 IFIT5Q13325 482 aaKnown RBP14.55□□□□□ -0.08
GTF2A2-202ENST00000396060 TNNI3KQ59H18 835 aa14.55□□□□□ -0.08
GTF2A2-202ENST00000396060 SYNE4Q8N205 404 aa14.55□□□□□ -0.08
GTF2A2-202ENST00000396060 C22orf23Q9BZE7 217 aa14.55□□□□□ -0.08
GTF2A2-202ENST00000396060 BCL2L12Q9HB09 334 aa14.55□□□□□ -0.08
GTF2A2-202ENST00000396060 NIP7Q9Y221 180 aaKnown RBP eCLIP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms