RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 TATP17735 454 aaPredicted RBP8□□□□□ -1.13
HMGB1P10-201ENST00000395823 USPL1Q5W0Q7 1092 aa8□□□□□ -1.13
HMGB1P10-201ENST00000395823 PRICKLE2Q7Z3G6 844 aa8□□□□□ -1.13
HMGB1P10-201ENST00000395823 BTLAQ7Z6A9 289 aa8□□□□□ -1.13
HMGB1P10-201ENST00000395823 TMEM87AQ8NBN3 555 aa8□□□□□ -1.13
HMGB1P10-201ENST00000395823 TNFRSF21O75509 655 aa7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 HIF1AQ16665 826 aa7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 NAALADL2Q58DX5 795 aa7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 WDR44Q5JSH3 913 aa7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 C6orf118Q5T5N4 469 aa7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 PI16Q6UXB8 463 aa7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 NT5DC4Q86YG4 428 aa7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 DNAJC25Q9H1X3 360 aa7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 FAM13BQ9NYF5 915 aa7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 RTCBQ9Y3I0 505 aaKnown RBP7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 KCNMB2Q9Y691 235 aa7.99□□□□□ -1.13
HMGB1P10-201ENST00000395823 RPLP1P05386 114 aaKnown RBP7.98□□□□□ -1.13
HMGB1P10-201ENST00000395823 BMP2P12643 396 aa7.98□□□□□ -1.13
HMGB1P10-201ENST00000395823 RHOQP17081 205 aa7.98□□□□□ -1.13
HMGB1P10-201ENST00000395823 MSX1P28360 303 aa7.98□□□□□ -1.13
HMGB1P10-201ENST00000395823 IRS1P35568 1242 aa7.98□□□□□ -1.13
HMGB1P10-201ENST00000395823 ARSDP51689 593 aa7.98□□□□□ -1.13
HMGB1P10-201ENST00000395823 XKR5Q6UX68 686 aa7.98□□□□□ -1.13
HMGB1P10-201ENST00000395823 LRRC69Q6ZNQ3 347 aa7.98□□□□□ -1.13
HMGB1P10-201ENST00000395823 SREK1Q8WXA9 508 aaKnown RBP7.98□□□□□ -1.13
HMGB1P10-201ENST00000395823 AK5Q9Y6K8 562 aa7.98□□□□□ -1.13
HMGB1P10-201ENST00000395823 CPNE3O75131 537 aaKnown RBP7.97□□□□□ -1.13
HMGB1P10-201ENST00000395823 TYRO3Q06418 890 aa7.97□□□□□ -1.13
HMGB1P10-201ENST00000395823 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMGB1P10-201ENST00000395823 BICDL1Q6ZP65 573 aa7.97□□□□□ -1.13
HMGB1P10-201ENST00000395823 LYSMD3Q7Z3D4 306 aa7.97□□□□□ -1.13
HMGB1P10-201ENST00000395823 METTL5Q9NRN9 209 aaKnown RBP7.97□□□□□ -1.13
HMGB1P10-201ENST00000395823 UPP2O95045 317 aa7.96□□□□□ -1.14
HMGB1P10-201ENST00000395823 MRPL14Q6P1L8 145 aaKnown RBP7.96□□□□□ -1.14
HMGB1P10-201ENST00000395823 EPS8L3Q8TE67 593 aaKnown RBP7.96□□□□□ -1.14
HMGB1P10-201ENST00000395823 CRELD1Q96HD1 420 aa7.96□□□□□ -1.14
HMGB1P10-201ENST00000395823 ANKIB1Q9P2G1 1089 aa7.96□□□□□ -1.14
HMGB1P10-201ENST00000395823 A0A1B0GTH6 734 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 A0A1W2PNR3 127 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 UBAP1LF5GYI3 381 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 BMP1P13497 986 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 ZNF76P36508 570 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 PDE12Q6L8Q7 609 aaKnown RBP7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 SNX29Q8TEQ0 813 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 CCDC74AQ96AQ1 378 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 OSBPL7Q9BZF2 842 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 CHRDQ9H2X0 955 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 TIMMDC1Q9NPL8 285 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 TMEM63CQ9P1W3 806 aa7.95□□□□□ -1.14
HMGB1P10-201ENST00000395823 TTLL8A6PVC2 850 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 NEFLP07196 543 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 ARSJQ5FYB0 599 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 TRIM46Q7Z4K8 759 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 ZNF438Q7Z4V0 828 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 CMTR1Q8N1G2 835 aaKnown RBP7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 TTC16Q8NEE8 873 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 RNF34Q969K3 372 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 DRC1Q96MC2 740 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 FRMD6Q96NE9 622 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 TINF2Q9BSI4 451 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 ELP3Q9H9T3 547 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 ZFYVE28Q9HCC9 887 aa7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 SOS2Q07890 1332 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P10-201ENST00000395823 ITGAEP38570 1179 aa7.93□□□□□ -1.14
HMGB1P10-201ENST00000395823 CRISPLD1Q9H336 500 aa7.93□□□□□ -1.14
HMGB1P10-201ENST00000395823 GPAMQ9HCL2 828 aa7.93□□□□□ -1.14
HMGB1P10-201ENST00000395823 SPG7Q9UQ90 795 aa7.93□□□□□ -1.14
HMGB1P10-201ENST00000395823 SHROOM4Q9ULL8 1493 aa7.93□□□□□ -1.14
HMGB1P10-201ENST00000395823 FIGNL2A6NMB9 653 aa7.92□□□□□ -1.14
HMGB1P10-201ENST00000395823 POLR3DP05423 398 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P10-201ENST00000395823 EIF4BP23588 611 aaKnown RBP7.92□□□□□ -1.14
HMGB1P10-201ENST00000395823 TGIF2Q9GZN2 237 aa7.92□□□□□ -1.14
HMGB1P10-201ENST00000395823 RUBCNLQ9H714 662 aa7.92□□□□□ -1.14
HMGB1P10-201ENST00000395823 C12orf49Q9H741 205 aa7.92□□□□□ -1.14
HMGB1P10-201ENST00000395823 CNTN3Q9P232 1028 aa7.92□□□□□ -1.14
HMGB1P10-201ENST00000395823 FNDC3AQ9Y2H6 1198 aaKnown RBP7.92□□□□□ -1.14
HMGB1P10-201ENST00000395823 PHACTR2O75167 634 aa7.91□□□□□ -1.14
HMGB1P10-201ENST00000395823 XYLBO75191 536 aa7.91□□□□□ -1.14
HMGB1P10-201ENST00000395823 AVPP01185 164 aa7.91□□□□□ -1.14
HMGB1P10-201ENST00000395823 ACBD3Q9H3P7 528 aa7.91□□□□□ -1.14
HMGB1P10-201ENST00000395823 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P10-201ENST00000395823 EREGO14944 169 aa7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 EGFRP00533 1210 aa7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 THBS1P07996 1170 aa7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 MEI1Q5TIA1 1274 aa7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 C1orf127Q8N9H9 656 aa7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 CEP63Q96MT8 703 aa7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 ZCCHC2Q9C0B9 1178 aaKnown RBP7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 NEUROD4Q9HD90 331 aa7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 NPHS2Q9NP85 383 aa7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 DNMT3LQ9UJW3 386 aa7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 PDZRN3Q9UPQ7 1066 aa7.9□□□□□ -1.14
HMGB1P10-201ENST00000395823 SENP3-EIF4A1A0A087X0R7 540 aa7.89□□□□□ -1.15
HMGB1P10-201ENST00000395823 FAM187AA6NFU0 413 aa7.89□□□□□ -1.15
HMGB1P10-201ENST00000395823 TNNI2P48788 182 aa7.89□□□□□ -1.15
HMGB1P10-201ENST00000395823 SAMD5Q5TGI4 173 aa7.89□□□□□ -1.15
HMGB1P10-201ENST00000395823 CCSER2Q9H7U1 834 aa7.89□□□□□ -1.15
HMGB1P10-201ENST00000395823 DYRK1BQ9Y463 629 aa7.89□□□□□ -1.15
HMGB1P10-201ENST00000395823 GIPC1O14908 333 aa7.88□□□□□ -1.15
HMGB1P10-201ENST00000395823 VEGFBP49765 207 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms