RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ZNF853P0CG23 659 aa17.81■□□□□ 0.44
CXCL12-205ENST00000395794 DPY19L2Q6NUT2 758 aa17.81■□□□□ 0.44
CXCL12-205ENST00000395794 HYPKQ9NX55 129 aa17.81■□□□□ 0.44
CXCL12-205ENST00000395794 NTSR2O95665 410 aa17.8■□□□□ 0.44
CXCL12-205ENST00000395794 CRY2Q49AN0 593 aa17.8■□□□□ 0.44
CXCL12-205ENST00000395794 RTKN2Q8IZC4 609 aa17.8■□□□□ 0.44
CXCL12-205ENST00000395794 NLRP3Q96P20 1036 aa17.8■□□□□ 0.44
CXCL12-205ENST00000395794 RRAGCQ9HB90 399 aa17.8■□□□□ 0.44
CXCL12-205ENST00000395794 ABCC12Q96J65 1359 aa17.79■□□□□ 0.44
CXCL12-205ENST00000395794 RNF123Q5XPI4 1314 aa17.79■□□□□ 0.44
CXCL12-205ENST00000395794 GLTPD2A6NH11 291 aa17.79■□□□□ 0.44
CXCL12-205ENST00000395794 PRELPP51888 382 aa17.79■□□□□ 0.44
CXCL12-205ENST00000395794 TCIRG1Q13488 830 aa17.79■□□□□ 0.44
CXCL12-205ENST00000395794 ANKRD13DQ6ZTN6 518 aa17.79■□□□□ 0.44
CXCL12-205ENST00000395794 RBM17Q96I25 401 aaKnown RBP17.79■□□□□ 0.44
CXCL12-205ENST00000395794 TMX4Q9H1E5 349 aaPredicted RBP17.79■□□□□ 0.44
CXCL12-205ENST00000395794 NUP98P52948 1817 aa17.79■□□□□ 0.44
CXCL12-205ENST00000395794 PLBD2Q8NHP8 589 aa17.78■□□□□ 0.44
CXCL12-205ENST00000395794 C7orf43Q8WVR3 580 aa17.78■□□□□ 0.44
CXCL12-205ENST00000395794 ELL2O00472 640 aaPredicted RBP17.77■□□□□ 0.44
CXCL12-205ENST00000395794 VEGFAP15692 232 aaPredicted RBP17.77■□□□□ 0.44
CXCL12-205ENST00000395794 HSPA6P17066 643 aa17.77■□□□□ 0.44
CXCL12-205ENST00000395794 HOXA10P31260 410 aaPredicted RBP17.77■□□□□ 0.44
CXCL12-205ENST00000395794 CCDC27Q2M243 656 aa17.77■□□□□ 0.44
CXCL12-205ENST00000395794 CC2D2BQ6DHV5 1058 aa17.77■□□□□ 0.44
CXCL12-205ENST00000395794 NLRP10Q86W26 655 aa17.77■□□□□ 0.44
CXCL12-205ENST00000395794 TRMT112Q9UI30 125 aaKnown RBP17.77■□□□□ 0.44
CXCL12-205ENST00000395794 RIC1Q4ADV7 1423 aa17.77■□□□□ 0.44
CXCL12-205ENST00000395794 SLX4Q8IY92 1834 aa17.77■□□□□ 0.43
CXCL12-205ENST00000395794 SBF1O95248 1867 aa17.76■□□□□ 0.43
CXCL12-205ENST00000395794 FKBP4Q02790 459 aaKnown RBP eCLIP17.76■□□□□ 0.43
CXCL12-205ENST00000395794 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
CXCL12-205ENST00000395794 GRIPAP1Q4V328 841 aa17.76■□□□□ 0.43
CXCL12-205ENST00000395794 SLC10A5Q5PT55 438 aa17.76■□□□□ 0.43
CXCL12-205ENST00000395794 RBM46Q8TBY0 533 aaKnown RBP17.76■□□□□ 0.43
CXCL12-205ENST00000395794 CRAMP1Q96RY5 1269 aa17.76■□□□□ 0.43
CXCL12-205ENST00000395794 SH3TC1Q8TE82 1336 aa17.74■□□□□ 0.43
CXCL12-205ENST00000395794 CCDC30Q5VVM6 783 aa17.74■□□□□ 0.43
CXCL12-205ENST00000395794 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
CXCL12-205ENST00000395794 WWC1Q8IX03 1113 aa17.74■□□□□ 0.43
CXCL12-205ENST00000395794 C8orf58Q8NAV2 365 aa17.74■□□□□ 0.43
CXCL12-205ENST00000395794 ARFGEF2Q9Y6D5 1785 aa17.74■□□□□ 0.43
CXCL12-205ENST00000395794 PPEF1O14829 653 aaPredicted RBP17.73■□□□□ 0.43
CXCL12-205ENST00000395794 FSTL1Q12841 308 aa17.73■□□□□ 0.43
CXCL12-205ENST00000395794 OLFM4Q6UX06 510 aa17.73■□□□□ 0.43
CXCL12-205ENST00000395794 ZNF277Q9NRM2 450 aaPredicted RBP17.73■□□□□ 0.43
CXCL12-205ENST00000395794 FER1L6Q2WGJ9 1857 aa17.72■□□□□ 0.43
CXCL12-205ENST00000395794 TNRC6CQ9HCJ0 1690 aaKnown RBP17.72■□□□□ 0.43
CXCL12-205ENST00000395794 TCERG1O14776 1098 aaKnown RBP17.72■□□□□ 0.43
CXCL12-205ENST00000395794 DDX58O95786 925 aaKnown RBP17.72■□□□□ 0.43
CXCL12-205ENST00000395794 HCLS1P14317 486 aaPredicted RBP17.72■□□□□ 0.43
CXCL12-205ENST00000395794 SYNE4Q8N205 404 aa17.72■□□□□ 0.43
CXCL12-205ENST00000395794 CACNA1SQ13698 1873 aa17.71■□□□□ 0.43
CXCL12-205ENST00000395794 ATP5J2-PTCD1G3V325 749 aa17.71■□□□□ 0.43
CXCL12-205ENST00000395794 APLP1P51693 650 aa17.71■□□□□ 0.43
CXCL12-205ENST00000395794 C3orf67Q6ZVT6 689 aa17.71■□□□□ 0.43
CXCL12-205ENST00000395794 DDX46Q7L014 1031 aaKnown RBP17.71■□□□□ 0.43
CXCL12-205ENST00000395794 SMC1BQ8NDV3 1235 aa17.71■□□□□ 0.43
CXCL12-205ENST00000395794 JDP2Q8WYK2 163 aa17.71■□□□□ 0.43
CXCL12-205ENST00000395794 TSR2Q969E8 191 aaKnown RBP17.71■□□□□ 0.43
CXCL12-205ENST00000395794 PSMD1Q99460 953 aa17.71■□□□□ 0.43
CXCL12-205ENST00000395794 STK31Q9BXU1 1019 aa17.71■□□□□ 0.43
CXCL12-205ENST00000395794 TIAM2Q8IVF5 1701 aa17.71■□□□□ 0.43
CXCL12-205ENST00000395794 IL16Q14005 1332 aa17.71■□□□□ 0.42
CXCL12-205ENST00000395794 BBOX1O75936 387 aa17.7■□□□□ 0.42
CXCL12-205ENST00000395794 IARSP41252 1262 aaKnown RBP17.7■□□□□ 0.42
CXCL12-205ENST00000395794 ISCA1Q9BUE6 129 aa17.7■□□□□ 0.42
CXCL12-205ENST00000395794 SALL2Q9Y467 1007 aaPredicted RBP17.7■□□□□ 0.42
CXCL12-205ENST00000395794 HSP90B1P14625 803 aaKnown RBP17.69■□□□□ 0.42
CXCL12-205ENST00000395794 TRIM28Q13263 835 aaKnown RBP17.69■□□□□ 0.42
CXCL12-205ENST00000395794 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
CXCL12-205ENST00000395794 ZNF428Q96B54 188 aa17.69■□□□□ 0.42
CXCL12-205ENST00000395794 PHAXQ9H814 394 aaKnown RBP17.69■□□□□ 0.42
CXCL12-205ENST00000395794 DDNO94850 711 aaPredicted RBP17.68■□□□□ 0.42
CXCL12-205ENST00000395794 TWISTNBQ3B726 338 aaPredicted RBP17.68■□□□□ 0.42
CXCL12-205ENST00000395794 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
CXCL12-205ENST00000395794 FAM89AQ96GI7 184 aa17.68■□□□□ 0.42
CXCL12-205ENST00000395794 ATP6V0A2Q9Y487 856 aa17.68■□□□□ 0.42
CXCL12-205ENST00000395794 ABCC4O15439 1325 aa17.68■□□□□ 0.42
CXCL12-205ENST00000395794 CCDC88AQ3V6T2 1871 aa17.67■□□□□ 0.42
CXCL12-205ENST00000395794 ANKRD36CQ5JPF3 1778 aa17.67■□□□□ 0.42
CXCL12-205ENST00000395794 IQCA1LA6NCM1 817 aa17.67■□□□□ 0.42
CXCL12-205ENST00000395794 TSPYL6Q8N831 410 aa17.67■□□□□ 0.42
CXCL12-205ENST00000395794 RTL5Q5HYW3 569 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-205ENST00000395794 LARGE2Q8N3Y3 721 aa17.66■□□□□ 0.42
CXCL12-205ENST00000395794 SUPT20HQ8NEM7 779 aa17.66■□□□□ 0.42
CXCL12-205ENST00000395794 MYD88Q99836 296 aa17.66■□□□□ 0.42
CXCL12-205ENST00000395794 IRS4O14654 1257 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-205ENST00000395794 EIF6P56537 245 aaKnown RBP17.65■□□□□ 0.42
CXCL12-205ENST00000395794 GRAPQ13588 217 aa17.65■□□□□ 0.42
CXCL12-205ENST00000395794 TMC4Q7Z404 712 aa17.65■□□□□ 0.42
CXCL12-205ENST00000395794 SP8Q8IXZ3 490 aa17.65■□□□□ 0.42
CXCL12-205ENST00000395794 CCDC191Q8NCU4 936 aa17.65■□□□□ 0.42
CXCL12-205ENST00000395794 GRAPLQ8TC17 118 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-205ENST00000395794 POTECB2RU33 542 aa17.64■□□□□ 0.41
CXCL12-205ENST00000395794 FZD9O00144 591 aa17.64■□□□□ 0.41
CXCL12-205ENST00000395794 NEXNQ0ZGT2 675 aa17.64■□□□□ 0.41
CXCL12-205ENST00000395794 DPP8Q6V1X1 898 aaPredicted RBP17.64■□□□□ 0.41
CXCL12-205ENST00000395794 ZBTB38Q8NAP3 1195 aaPredicted RBP17.64■□□□□ 0.41
CXCL12-205ENST00000395794 METTL22Q9BUU2 404 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms