RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ANKRD24Q8TF21 1146 aa8.52□□□□□ -1.05
PTPN20-208ENST00000395727 NCAPD2Q15021 1401 aa8.52□□□□□ -1.05
PTPN20-208ENST00000395727 MAP3K19Q56UN5 1328 aa8.52□□□□□ -1.05
PTPN20-208ENST00000395727 SHANK3Q9BYB0 1731 aa8.51□□□□□ -1.05
PTPN20-208ENST00000395727 EXOC5O00471 708 aa8.51□□□□□ -1.05
PTPN20-208ENST00000395727 LILRB3O75022 631 aa8.51□□□□□ -1.05
PTPN20-208ENST00000395727 ADH1BP00325 375 aa8.51□□□□□ -1.05
PTPN20-208ENST00000395727 IL2RBP14784 551 aa8.51□□□□□ -1.05
PTPN20-208ENST00000395727 HOXC9P31274 260 aa8.51□□□□□ -1.05
PTPN20-208ENST00000395727 SYMPKQ92797 1274 aaKnown RBP8.51□□□□□ -1.05
PTPN20-208ENST00000395727 PCMTD1Q96MG8 357 aaPredicted RBP8.51□□□□□ -1.05
PTPN20-208ENST00000395727 SPSB2Q99619 263 aa8.51□□□□□ -1.05
PTPN20-208ENST00000395727 PLA2G2EQ9NZK7 142 aa8.51□□□□□ -1.05
PTPN20-208ENST00000395727 PAPPAQ13219 1627 aa8.51□□□□□ -1.05
PTPN20-208ENST00000395727 INSRP06213 1382 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 FLT4P35916 1363 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 PLEKHG2Q9H7P9 1386 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 QPCTQ16769 361 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 CSPP1Q1MSJ5 1256 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 SMG6Q86US8 1419 aaKnown RBP8.5□□□□□ -1.05
PTPN20-208ENST00000395727 RETREG3Q86VR2 466 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 USB1Q9BQ65 265 aaKnown RBP8.5□□□□□ -1.05
PTPN20-208ENST00000395727 PCGF6Q9BYE7 350 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 NSD3Q9BZ95 1437 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 NLRP2Q9NX02 1062 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 CASZ1Q86V15 1759 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 CGNL1Q0VF96 1302 aa8.5□□□□□ -1.05
PTPN20-208ENST00000395727 SPDYE5A6NIY4 337 aa8.49□□□□□ -1.05
PTPN20-208ENST00000395727 C6orf229H3BNL8 230 aa8.49□□□□□ -1.05
PTPN20-208ENST00000395727 EIF4G2P78344 907 aaKnown RBP eCLIP8.49□□□□□ -1.05
PTPN20-208ENST00000395727 MTMR2Q13614 643 aa8.49□□□□□ -1.05
PTPN20-208ENST00000395727 MSS51Q4VC12 460 aa8.49□□□□□ -1.05
PTPN20-208ENST00000395727 FAM160A2Q8N612 972 aaPredicted RBP8.49□□□□□ -1.05
PTPN20-208ENST00000395727 ZBTB3Q9H5J0 574 aa8.49□□□□□ -1.05
PTPN20-208ENST00000395727 NSD2O96028 1365 aa8.48□□□□□ -1.05
PTPN20-208ENST00000395727 BTAF1O14981 1849 aa8.48□□□□□ -1.05
PTPN20-208ENST00000395727 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
PTPN20-208ENST00000395727 CARD14Q9BXL6 1004 aa8.48□□□□□ -1.05
PTPN20-208ENST00000395727 GGNBP2Q9H3C7 697 aa8.48□□□□□ -1.05
PTPN20-208ENST00000395727 PKD1L3Q7Z443 1732 aa8.48□□□□□ -1.05
PTPN20-208ENST00000395727 MEGF6O75095 1541 aa8.48□□□□□ -1.05
PTPN20-208ENST00000395727 RGPD2P0DJD1 1756 aa8.48□□□□□ -1.05
PTPN20-208ENST00000395727 QSER1Q2KHR3 1735 aa8.47□□□□□ -1.05
PTPN20-208ENST00000395727 DOT1LQ8TEK3 1739 aa8.47□□□□□ -1.05
PTPN20-208ENST00000395727 AMPHP49418 695 aa8.47□□□□□ -1.05
PTPN20-208ENST00000395727 R3HDM1Q15032 1099 aaKnown RBP8.47□□□□□ -1.05
PTPN20-208ENST00000395727 RTL5Q5HYW3 569 aaPredicted RBP8.47□□□□□ -1.05
PTPN20-208ENST00000395727 NBPF14Q5TI25 921 aa8.47□□□□□ -1.05
PTPN20-208ENST00000395727 CCER1Q8TC90 406 aaPredicted RBP8.47□□□□□ -1.05
PTPN20-208ENST00000395727 LY75O60449 1722 aa8.46□□□□□ -1.05
PTPN20-208ENST00000395727 CFAP99D6REC4 459 aa8.45□□□□□ -1.06
PTPN20-208ENST00000395727 HSPA5P11021 654 aaKnown RBP8.45□□□□□ -1.06
PTPN20-208ENST00000395727 MMP16P51512 607 aa8.45□□□□□ -1.06
PTPN20-208ENST00000395727 RRS1Q15050 365 aaKnown RBP8.45□□□□□ -1.06
PTPN20-208ENST00000395727 SLC6A16Q9GZN6 736 aa8.45□□□□□ -1.06
PTPN20-208ENST00000395727 WASHC2AQ641Q2 1341 aa8.45□□□□□ -1.06
PTPN20-208ENST00000395727 DXOO77932 396 aaKnown RBP8.44□□□□□ -1.06
PTPN20-208ENST00000395727 S1PR4O95977 384 aa8.44□□□□□ -1.06
PTPN20-208ENST00000395727 TXNRD1Q16881 649 aa8.44□□□□□ -1.06
PTPN20-208ENST00000395727 NBPF6Q5VWK0 638 aa8.44□□□□□ -1.06
PTPN20-208ENST00000395727 DESI1Q6ICB0 168 aa8.44□□□□□ -1.06
PTPN20-208ENST00000395727 PTF1AQ7RTS3 328 aa8.44□□□□□ -1.06
PTPN20-208ENST00000395727 PRR7Q8TB68 274 aa8.44□□□□□ -1.06
PTPN20-208ENST00000395727 NBPF4Q96M43 638 aa8.44□□□□□ -1.06
PTPN20-208ENST00000395727 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
PTPN20-208ENST00000395727 COL24A1Q17RW2 1714 aa8.43□□□□□ -1.06
PTPN20-208ENST00000395727 KCNQ2O43526 872 aa8.43□□□□□ -1.06
PTPN20-208ENST00000395727 FBLN1P23142 703 aa8.43□□□□□ -1.06
PTPN20-208ENST00000395727 PPP1R18Q6NYC8 613 aa8.43□□□□□ -1.06
PTPN20-208ENST00000395727 ZCRB1Q8TBF4 217 aaKnown RBP8.43□□□□□ -1.06
PTPN20-208ENST00000395727 PCDH11XQ9BZA7 1347 aa8.43□□□□□ -1.06
PTPN20-208ENST00000395727 PCDH11YQ9BZA8 1340 aa8.43□□□□□ -1.06
PTPN20-208ENST00000395727 MAP2P11137 1827 aaKnown RBP8.43□□□□□ -1.06
PTPN20-208ENST00000395727 JUNDP17535 347 aa8.42□□□□□ -1.06
PTPN20-208ENST00000395727 RFC5P40937 340 aa8.42□□□□□ -1.06
PTPN20-208ENST00000395727 SLC15A2Q16348 729 aa8.42□□□□□ -1.06
PTPN20-208ENST00000395727 HSP90AB2PQ58FF8 381 aa8.42□□□□□ -1.06
PTPN20-208ENST00000395727 SLC27A3Q5K4L6 730 aa8.42□□□□□ -1.06
PTPN20-208ENST00000395727 RAPGEF4Q8WZA2 1011 aa8.42□□□□□ -1.06
PTPN20-208ENST00000395727 LTV1Q96GA3 475 aaPredicted RBP8.42□□□□□ -1.06
PTPN20-208ENST00000395727 POLKQ9UBT6 870 aa8.42□□□□□ -1.06
PTPN20-208ENST00000395727 EMILIN1Q9Y6C2 1016 aa8.42□□□□□ -1.06
PTPN20-208ENST00000395727 TOGARAM1Q9Y4F4 1720 aa8.42□□□□□ -1.06
PTPN20-208ENST00000395727 TATP17735 454 aaPredicted RBP8.41□□□□□ -1.06
PTPN20-208ENST00000395727 HMGB2P26583 209 aaKnown RBP8.41□□□□□ -1.06
PTPN20-208ENST00000395727 SPON1Q9HCB6 807 aa8.41□□□□□ -1.06
PTPN20-208ENST00000395727 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
PTPN20-208ENST00000395727 RNF223E7ERA6 249 aa8.4□□□□□ -1.06
PTPN20-208ENST00000395727 GGCXP38435 758 aa8.4□□□□□ -1.06
PTPN20-208ENST00000395727 DDX54Q8TDD1 881 aaKnown RBP8.4□□□□□ -1.06
PTPN20-208ENST00000395727 ACSBG1Q96GR2 724 aa8.4□□□□□ -1.06
PTPN20-208ENST00000395727 STK32BQ9NY57 414 aa8.4□□□□□ -1.06
PTPN20-208ENST00000395727 C5P01031 1676 aa8.4□□□□□ -1.07
PTPN20-208ENST00000395727 ZNF831Q5JPB2 1677 aa8.4□□□□□ -1.07
PTPN20-208ENST00000395727 NPC1L1Q9UHC9 1359 aa8.39□□□□□ -1.07
PTPN20-208ENST00000395727 IGSF1Q8N6C5 1336 aa8.39□□□□□ -1.07
PTPN20-208ENST00000395727 LYPD8Q6UX82 237 aa8.39□□□□□ -1.07
PTPN20-208ENST00000395727 PANK3Q9H999 370 aa8.39□□□□□ -1.07
PTPN20-208ENST00000395727 LRRC4BQ9NT99 713 aa8.39□□□□□ -1.07
PTPN20-208ENST00000395727 TUBGCP6Q96RT7 1819 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms