RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 IQCA1LA6NCM1 817 aa25.28■■□□□ 1.64
COL11A2-204ENST00000395194 PDIA6Q15084 440 aa25.28■■□□□ 1.64
COL11A2-204ENST00000395194 C3orf67Q6ZVT6 689 aa25.28■■□□□ 1.64
COL11A2-204ENST00000395194 L3MBTL3Q96JM7 780 aaPredicted RBP25.28■■□□□ 1.64
COL11A2-204ENST00000395194 TAF1DQ9H5J8 278 aaPredicted RBP25.28■■□□□ 1.64
COL11A2-204ENST00000395194 EAPPQ56P03 285 aaPredicted RBP25.27■■□□□ 1.64
COL11A2-204ENST00000395194 LRP10Q7Z4F1 713 aa25.27■■□□□ 1.64
COL11A2-204ENST00000395194 MYBBP1AQ9BQG0 1328 aaKnown RBP25.27■■□□□ 1.64
COL11A2-204ENST00000395194 COL4A5P29400 1685 aa25.26■■□□□ 1.63
COL11A2-204ENST00000395194 LAMB2P55268 1798 aa25.26■■□□□ 1.63
COL11A2-204ENST00000395194 LMOD3Q0VAK6 560 aa25.26■■□□□ 1.63
COL11A2-204ENST00000395194 RNF123Q5XPI4 1314 aa25.26■■□□□ 1.63
COL11A2-204ENST00000395194 RIC1Q4ADV7 1423 aa25.26■■□□□ 1.63
COL11A2-204ENST00000395194 AIMP1Q12904 312 aaKnown RBP25.25■■□□□ 1.63
COL11A2-204ENST00000395194 KRT24Q2M2I5 525 aa25.25■■□□□ 1.63
COL11A2-204ENST00000395194 COL13A1Q5TAT6 717 aaPredicted RBP25.25■■□□□ 1.63
COL11A2-204ENST00000395194 LAS1LQ9Y4W2 734 aaKnown RBP25.25■■□□□ 1.63
COL11A2-204ENST00000395194 PPP1R42Q7Z4L9 355 aa25.24■■□□□ 1.63
COL11A2-204ENST00000395194 LDHDQ86WU2 507 aa25.24■■□□□ 1.63
COL11A2-204ENST00000395194 RBM17Q96I25 401 aaKnown RBP25.24■■□□□ 1.63
COL11A2-204ENST00000395194 PSMD1Q99460 953 aa25.24■■□□□ 1.63
COL11A2-204ENST00000395194 MKRN1Q9UHC7 482 aaKnown RBP25.24■■□□□ 1.63
COL11A2-204ENST00000395194 HACL1Q9UJ83 578 aa25.24■■□□□ 1.63
COL11A2-204ENST00000395194 PPEF1O14829 653 aaPredicted RBP25.23■■□□□ 1.63
COL11A2-204ENST00000395194 HOXA10P31260 410 aaPredicted RBP25.23■■□□□ 1.63
COL11A2-204ENST00000395194 JDP2Q8WYK2 163 aa25.23■■□□□ 1.63
COL11A2-204ENST00000395194 CLEC11AQ9Y240 323 aa25.23■■□□□ 1.63
COL11A2-204ENST00000395194 FZD9O00144 591 aa25.22■■□□□ 1.63
COL11A2-204ENST00000395194 HSPA1AP0DMV8 641 aaKnown RBP25.22■■□□□ 1.63
COL11A2-204ENST00000395194 HSPA1BP0DMV9 641 aaKnown RBP25.22■■□□□ 1.63
COL11A2-204ENST00000395194 PARP10Q53GL7 1025 aa25.22■■□□□ 1.63
COL11A2-204ENST00000395194 ZNF428Q96B54 188 aa25.22■■□□□ 1.63
COL11A2-204ENST00000395194 ADAMTSL1Q8N6G6 1762 aa25.21■■□□□ 1.63
COL11A2-204ENST00000395194 EPHX2P34913 555 aa25.21■■□□□ 1.63
COL11A2-204ENST00000395194 WDR43Q15061 677 aaKnown RBP eCLIP25.21■■□□□ 1.63
COL11A2-204ENST00000395194 CC2D2BQ6DHV5 1058 aa25.21■■□□□ 1.63
COL11A2-204ENST00000395194 COPS6Q7L5N1 327 aa25.21■■□□□ 1.63
COL11A2-204ENST00000395194 XAGE3Q8WTP9 111 aa25.21■■□□□ 1.63
COL11A2-204ENST00000395194 UTP14AQ9BVJ6 771 aaKnown RBP25.21■■□□□ 1.63
COL11A2-204ENST00000395194 CREBZFQ9NS37 354 aa25.21■■□□□ 1.63
COL11A2-204ENST00000395194 BABAM1Q9NWV8 329 aa25.21■■□□□ 1.63
COL11A2-204ENST00000395194 GJA3Q9Y6H8 435 aa25.21■■□□□ 1.63
COL11A2-204ENST00000395194 TAF1P21675 1872 aa25.21■■□□□ 1.63
COL11A2-204ENST00000395194 NLRP3Q96P20 1036 aa25.2■■□□□ 1.62
COL11A2-204ENST00000395194 CRAMP1Q96RY5 1269 aa25.2■■□□□ 1.62
COL11A2-204ENST00000395194 LARGE2Q8N3Y3 721 aa25.19■■□□□ 1.62
COL11A2-204ENST00000395194 LTBP1Q14766 1721 aa25.19■■□□□ 1.62
COL11A2-204ENST00000395194 PASKQ96RG2 1323 aa25.18■■□□□ 1.62
COL11A2-204ENST00000395194 EIF6P56537 245 aaKnown RBP25.18■■□□□ 1.62
COL11A2-204ENST00000395194 GPC2Q8N158 579 aa25.18■■□□□ 1.62
COL11A2-204ENST00000395194 RUNDC1Q96C34 613 aa25.18■■□□□ 1.62
COL11A2-204ENST00000395194 TRIM35Q9UPQ4 493 aa25.18■■□□□ 1.62
COL11A2-204ENST00000395194 ABCC4O15439 1325 aa25.16■■□□□ 1.62
COL11A2-204ENST00000395194 CHL1O00533 1208 aa25.16■■□□□ 1.62
COL11A2-204ENST00000395194 HCLS1P14317 486 aaPredicted RBP25.16■■□□□ 1.62
COL11A2-204ENST00000395194 NLRP10Q86W26 655 aa25.16■■□□□ 1.62
COL11A2-204ENST00000395194 CHPF2Q9P2E5 772 aa25.16■■□□□ 1.62
COL11A2-204ENST00000395194 ADAMTS8Q9UP79 889 aa25.16■■□□□ 1.62
COL11A2-204ENST00000395194 HSP90AB3PQ58FF7 597 aa25.15■■□□□ 1.62
COL11A2-204ENST00000395194 MAP1SQ66K74 1059 aaPredicted RBP25.15■■□□□ 1.62
COL11A2-204ENST00000395194 DDX21Q9NR30 783 aaKnown RBP eCLIP25.15■■□□□ 1.62
COL11A2-204ENST00000395194 PPIP5K2O43314 1243 aa25.14■■□□□ 1.62
COL11A2-204ENST00000395194 ITGBL1O95965 494 aaPredicted RBP25.14■■□□□ 1.62
COL11A2-204ENST00000395194 SLC10A5Q5PT55 438 aa25.14■■□□□ 1.62
COL11A2-204ENST00000395194 AOC3Q16853 763 aa25.13■■□□□ 1.61
COL11A2-204ENST00000395194 NIM1KQ8IY84 436 aa25.13■■□□□ 1.61
COL11A2-204ENST00000395194 TMX4Q9H1E5 349 aaPredicted RBP25.13■■□□□ 1.61
COL11A2-204ENST00000395194 TRMT112Q9UI30 125 aaKnown RBP25.13■■□□□ 1.61
COL11A2-204ENST00000395194 ATP6V0A2Q9Y487 856 aa25.13■■□□□ 1.61
COL11A2-204ENST00000395194 CNTNAP1P78357 1384 aa25.13■■□□□ 1.61
COL11A2-204ENST00000395194 DDX60Q8IY21 1712 aaKnown RBP25.12■■□□□ 1.61
COL11A2-204ENST00000395194 CAPN15O75808 1086 aa25.12■■□□□ 1.61
COL11A2-204ENST00000395194 LMOD1P29536 600 aaPredicted RBP25.12■■□□□ 1.61
COL11A2-204ENST00000395194 TCIRG1Q13488 830 aa25.12■■□□□ 1.61
COL11A2-204ENST00000395194 HDGFL1Q5TGJ6 251 aa25.12■■□□□ 1.61
COL11A2-204ENST00000395194 PNMA8AQ86V59 439 aaPredicted RBP25.12■■□□□ 1.61
COL11A2-204ENST00000395194 TNS4Q8IZW8 715 aa25.12■■□□□ 1.61
COL11A2-204ENST00000395194 TMEM88BA6NKF7 163 aa25.11■■□□□ 1.61
COL11A2-204ENST00000395194 GRIPAP1Q4V328 841 aa25.11■■□□□ 1.61
COL11A2-204ENST00000395194 CNTROBQ8N137 903 aa25.11■■□□□ 1.61
COL11A2-204ENST00000395194 EPS15P42566 896 aa25.1■■□□□ 1.61
COL11A2-204ENST00000395194 SCNN1DP51172 638 aa25.1■■□□□ 1.61
COL11A2-204ENST00000395194 SH3TC1Q8TE82 1336 aa25.1■■□□□ 1.61
COL11A2-204ENST00000395194 DDX46Q7L014 1031 aaKnown RBP25.08■■□□□ 1.61
COL11A2-204ENST00000395194 PRKRIP1Q9H875 184 aaPredicted RBP25.08■■□□□ 1.61
COL11A2-204ENST00000395194 ATP5J2-PTCD1G3V325 749 aa25.07■■□□□ 1.6
COL11A2-204ENST00000395194 DPP8Q6V1X1 898 aaPredicted RBP25.07■■□□□ 1.6
COL11A2-204ENST00000395194 VEGFBP49765 207 aa25.06■■□□□ 1.6
COL11A2-204ENST00000395194 FMR1Q06787 632 aaKnown RBP eCLIP25.06■■□□□ 1.6
COL11A2-204ENST00000395194 DUSP27Q5VZP5 1158 aa25.06■■□□□ 1.6
COL11A2-204ENST00000395194 PLBD2Q8NHP8 589 aa25.06■■□□□ 1.6
COL11A2-204ENST00000395194 MBIPQ9NS73 344 aa25.06■■□□□ 1.6
COL11A2-204ENST00000395194 TRPM7Q96QT4 1865 aa25.05■■□□□ 1.6
COL11A2-204ENST00000395194 BBOX1O75936 387 aa25.05■■□□□ 1.6
COL11A2-204ENST00000395194 GRAPQ13588 217 aa25.05■■□□□ 1.6
COL11A2-204ENST00000395194 RTL5Q5HYW3 569 aaPredicted RBP25.05■■□□□ 1.6
COL11A2-204ENST00000395194 ANKRD13DQ6ZTN6 518 aa25.05■■□□□ 1.6
COL11A2-204ENST00000395194 SP8Q8IXZ3 490 aa25.05■■□□□ 1.6
COL11A2-204ENST00000395194 MPNDQ8N594 471 aa25.05■■□□□ 1.6
COL11A2-204ENST00000395194 GRAPLQ8TC17 118 aaPredicted RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms