RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 MACROD2A1Z1Q3 448 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 CCDC40Q4G0X9 1142 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 TCERG1LQ5VWI1 586 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 C14orf93Q9H972 538 aaKnown RBP11.99□□□□□ -0.49
COL4A6-203ENST00000394872 TNNT1P13805 278 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 GOPCQ9HD26 462 aa11.99□□□□□ -0.49
COL4A6-203ENST00000394872 CTAGE5O15320 804 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 ANXA1P04083 346 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 TSPY3P0CV98 308 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 TSPY8P0CW00 308 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 IDEP14735 1019 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 GJB2P29033 226 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 UBXN4Q92575 508 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 TTC21AQ8NDW8 1320 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 USP8P40818 1118 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 DHX29Q7Z478 1369 aaKnown RBP11.98□□□□□ -0.49
COL4A6-203ENST00000394872 CTNNA2P26232 953 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 CPLX3Q8WVH0 158 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 GRM1Q13255 1194 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 NEK1Q96PY6 1258 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 GSTTP1A0A1W2PQM5 241 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 USO1O60763 962 aaKnown RBP11.98□□□□□ -0.49
COL4A6-203ENST00000394872 DYDC1Q8WWB3 177 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 BICD1Q96G01 975 aa11.98□□□□□ -0.49
COL4A6-203ENST00000394872 YEATS4O95619 227 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 LUZP1Q86V48 1076 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 CRACR2AQ9BSW2 395 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 ZGPATQ8N5A5 531 aaKnown RBP11.97□□□□□ -0.49
COL4A6-203ENST00000394872 GBP3Q9H0R5 595 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 CHPF2Q9P2E5 772 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 CYP7A1P22680 504 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 PTPN14Q15678 1187 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 PUF60Q9UHX1 559 aaKnown RBP11.97□□□□□ -0.49
COL4A6-203ENST00000394872 STX8Q9UNK0 236 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 TSHZ3Q63HK5 1081 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 ORC3Q9UBD5 711 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-203ENST00000394872 CA8P35219 290 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 CKAP2LQ8IYA6 745 aa11.97□□□□□ -0.49
COL4A6-203ENST00000394872 ANKRD36BQ8N2N9 1353 aa11.96□□□□□ -0.49
COL4A6-203ENST00000394872 PRC1O43663 620 aa11.96□□□□□ -0.49
COL4A6-203ENST00000394872 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.49
COL4A6-203ENST00000394872 NPHP3Q7Z494 1330 aa11.96□□□□□ -0.49
COL4A6-203ENST00000394872 KIF2AO00139 706 aaPredicted RBP11.96□□□□□ -0.49
COL4A6-203ENST00000394872 UBA7P41226 1012 aa11.96□□□□□ -0.49
COL4A6-203ENST00000394872 PICALMQ13492 652 aa11.96□□□□□ -0.49
COL4A6-203ENST00000394872 CLIP2Q9UDT6 1046 aa11.96□□□□□ -0.49
COL4A6-203ENST00000394872 NLRP3Q96P20 1036 aa11.96□□□□□ -0.49
COL4A6-203ENST00000394872 PANK2Q9BZ23 570 aa11.96□□□□□ -0.49
COL4A6-203ENST00000394872 WTAPQ15007 396 aa11.96□□□□□ -0.5
COL4A6-203ENST00000394872 HOOK3Q86VS8 718 aa11.96□□□□□ -0.5
COL4A6-203ENST00000394872 OGFOD1Q8N543 542 aa11.96□□□□□ -0.5
COL4A6-203ENST00000394872 XAGE3Q8WTP9 111 aa11.96□□□□□ -0.5
COL4A6-203ENST00000394872 SMARCC1Q92922 1105 aaPredicted RBP11.96□□□□□ -0.5
COL4A6-203ENST00000394872 SLC4A4Q9Y6R1 1079 aa11.96□□□□□ -0.5
COL4A6-203ENST00000394872 MAP2K1Q02750 393 aaPredicted RBP11.96□□□□□ -0.5
COL4A6-203ENST00000394872 PYM1Q9BRP8 204 aaKnown RBP11.96□□□□□ -0.5
COL4A6-203ENST00000394872 PPFIA3O75145 1194 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 FAM114A1Q8IWE2 563 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 HMG20BQ9P0W2 317 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 IQSEC3Q9UPP2 1182 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-203ENST00000394872 NIP7Q9Y221 180 aaKnown RBP eCLIP11.95□□□□□ -0.5
COL4A6-203ENST00000394872 BIN1O00499 593 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 DDB1Q16531 1140 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 IFIT1BQ5T764 474 aaKnown RBP11.95□□□□□ -0.5
COL4A6-203ENST00000394872 VTI1AQ96AJ9 217 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 TFIP11Q9UBB9 837 aaKnown RBP11.95□□□□□ -0.5
COL4A6-203ENST00000394872 KRT23Q9C075 422 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 TMX1Q9H3N1 280 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 TBCAO75347 108 aaKnown RBP11.95□□□□□ -0.5
COL4A6-203ENST00000394872 MCM5P33992 734 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 MAP9Q49MG5 647 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 LRRC27Q9C0I9 530 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 MMRN2Q9H8L6 949 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 IFFO1Q0D2I5 559 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 SLC39A6Q13433 755 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 ZNF804AQ7Z570 1209 aa11.95□□□□□ -0.5
COL4A6-203ENST00000394872 FBLN1P23142 703 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 UTP14AQ9BVJ6 771 aaKnown RBP11.94□□□□□ -0.5
COL4A6-203ENST00000394872 C11orf95C9JLR9 678 aaPredicted RBP11.94□□□□□ -0.5
COL4A6-203ENST00000394872 TMCO3Q6UWJ1 677 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 SSFA2P28290 1259 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 NYXQ9GZU5 481 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 KDM5BQ9UGL1 1544 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 URI1O94763 535 aaPredicted RBP11.94□□□□□ -0.5
COL4A6-203ENST00000394872 PAFAH1B1P43034 410 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 ATP2B3Q16720 1220 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 CCDC174Q6PII3 467 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 TBC1D9Q6ZT07 1266 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 COPS6Q7L5N1 327 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 COMMD10Q9Y6G5 202 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 PPIP5K1Q6PFW1 1433 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 DDX19AQ9NUU7 478 aaKnown RBP11.94□□□□□ -0.5
COL4A6-203ENST00000394872 TMCO5BA8MYB1 307 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 MCM3P25205 808 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 ERMNQ8TAM6 284 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 EXOC1Q9NV70 894 aa11.94□□□□□ -0.5
COL4A6-203ENST00000394872 STX6O43752 255 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 KANK3Q6NY19 840 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms