RNA–Protein interactions for RNA: ENST00000394310.7

CACNB1-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CACNB1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-203ENST00000394310 HSP90AB4PQ58FF6 505 aa27.43■■□□□ 1.98
CACNB1-203ENST00000394310 C4BP0C0L5 1744 aa27.42■■□□□ 1.98
CACNB1-203ENST00000394310 EPHA10Q5JZY3 1008 aa27.42■■□□□ 1.98
CACNB1-203ENST00000394310 PLA2G12BQ9BX93 195 aa27.42■■□□□ 1.98
CACNB1-203ENST00000394310 ZNF652Q9Y2D9 606 aa27.41■■□□□ 1.98
CACNB1-203ENST00000394310 RTCBQ9Y3I0 505 aaKnown RBP27.41■■□□□ 1.98
CACNB1-203ENST00000394310 CDHR2Q9BYE9 1310 aa27.41■■□□□ 1.98
CACNB1-203ENST00000394310 FOXO4P98177 505 aa27.4■■□□□ 1.98
CACNB1-203ENST00000394310 BCORQ6W2J9 1755 aa27.4■■□□□ 1.98
CACNB1-203ENST00000394310 APBA3O96018 575 aa27.4■■□□□ 1.98
CACNB1-203ENST00000394310 ZBTB47Q9UFB7 747 aaPredicted RBP27.4■■□□□ 1.98
CACNB1-203ENST00000394310 EXOC6BQ9Y2D4 811 aa27.4■■□□□ 1.98
CACNB1-203ENST00000394310 PARP10Q53GL7 1025 aa27.39■■□□□ 1.98
CACNB1-203ENST00000394310 NARFQ9UHQ1 456 aa27.39■■□□□ 1.98
CACNB1-203ENST00000394310 GNPATO15228 680 aa27.38■■□□□ 1.97
CACNB1-203ENST00000394310 SURF6O75683 361 aaKnown RBP27.38■■□□□ 1.97
CACNB1-203ENST00000394310 LRRCC1Q9C099 1032 aa27.38■■□□□ 1.97
CACNB1-203ENST00000394310 ADRA2BP18089 450 aa27.37■■□□□ 1.97
CACNB1-203ENST00000394310 JARID2Q92833 1246 aaPredicted RBP27.37■■□□□ 1.97
CACNB1-203ENST00000394310 UBN2Q6ZU65 1347 aa27.37■■□□□ 1.97
CACNB1-203ENST00000394310 PROM2Q8N271 834 aa27.37■■□□□ 1.97
CACNB1-203ENST00000394310 GPTP24298 496 aa27.36■■□□□ 1.97
CACNB1-203ENST00000394310 TXNRD1Q16881 649 aa27.36■■□□□ 1.97
CACNB1-203ENST00000394310 COPRSQ9NQ92 184 aa27.36■■□□□ 1.97
CACNB1-203ENST00000394310 AK7Q96M32 723 aa27.35■■□□□ 1.97
CACNB1-203ENST00000394310 RFX5P48382 616 aaPredicted RBP27.35■■□□□ 1.97
CACNB1-203ENST00000394310 LMBR1LQ6UX01 489 aa27.34■■□□□ 1.97
CACNB1-203ENST00000394310 KIF1BPQ96EK5 621 aa27.34■■□□□ 1.97
CACNB1-203ENST00000394310 FAM89AQ96GI7 184 aa27.34■■□□□ 1.97
CACNB1-203ENST00000394310 TSHZ2Q9NRE2 1034 aa27.34■■□□□ 1.97
CACNB1-203ENST00000394310 SCN7AQ01118 1682 aa27.34■■□□□ 1.97
CACNB1-203ENST00000394310 TRAPPC3LQ5T215 181 aa27.33■■□□□ 1.97
CACNB1-203ENST00000394310 ERC1Q8IUD2 1116 aa27.33■■□□□ 1.97
CACNB1-203ENST00000394310 ARHGEF1Q92888 912 aaKnown RBP27.33■■□□□ 1.97
CACNB1-203ENST00000394310 TRMT112Q9UI30 125 aaKnown RBP27.33■■□□□ 1.97
CACNB1-203ENST00000394310 CSF1RP07333 972 aa27.32■■□□□ 1.96
CACNB1-203ENST00000394310 RGPD3A6NKT7 1758 aaPredicted RBP27.32■■□□□ 1.96
CACNB1-203ENST00000394310 RGPD4Q7Z3J3 1758 aa27.32■■□□□ 1.96
CACNB1-203ENST00000394310 PLEKHM2Q8IWE5 1019 aa27.32■■□□□ 1.96
CACNB1-203ENST00000394310 RHPN1Q8TCX5 695 aa27.32■■□□□ 1.96
CACNB1-203ENST00000394310 ZPR1O75312 459 aa27.31■■□□□ 1.96
CACNB1-203ENST00000394310 SUSD4Q5VX71 490 aa27.31■■□□□ 1.96
CACNB1-203ENST00000394310 UTP14AQ9BVJ6 771 aaKnown RBP27.31■■□□□ 1.96
CACNB1-203ENST00000394310 BCL2L12Q9HB09 334 aa27.31■■□□□ 1.96
CACNB1-203ENST00000394310 NIP7Q9Y221 180 aaKnown RBP eCLIP27.31■■□□□ 1.96
CACNB1-203ENST00000394310 PTPN12Q05209 780 aaKnown RBP27.3■■□□□ 1.96
CACNB1-203ENST00000394310 FAM161AQ3B820 660 aa27.3■■□□□ 1.96
CACNB1-203ENST00000394310 RTL5Q5HYW3 569 aaPredicted RBP27.3■■□□□ 1.96
CACNB1-203ENST00000394310 SMIM5Q71RC9 77 aa27.3■■□□□ 1.96
CACNB1-203ENST00000394310 AMIGO3Q86WK7 504 aa27.3■■□□□ 1.96
CACNB1-203ENST00000394310 BACH2Q9BYV9 841 aa27.3■■□□□ 1.96
CACNB1-203ENST00000394310 OSBPL3Q9H4L5 887 aa27.3■■□□□ 1.96
CACNB1-203ENST00000394310 TNS1Q9HBL0 1735 aaKnown RBP27.3■■□□□ 1.96
CACNB1-203ENST00000394310 SMARCA5O60264 1052 aaPredicted RBP27.3■■□□□ 1.96
CACNB1-203ENST00000394310 HSP90B1P14625 803 aaKnown RBP27.3■■□□□ 1.96
CACNB1-203ENST00000394310 SSFA2P28290 1259 aa27.3■■□□□ 1.96
CACNB1-203ENST00000394310 UBR3Q6ZT12 1888 aa27.29■■□□□ 1.96
CACNB1-203ENST00000394310 SH3TC1Q8TE82 1336 aa27.29■■□□□ 1.96
CACNB1-203ENST00000394310 APBB1O00213 710 aa27.29■■□□□ 1.96
CACNB1-203ENST00000394310 SALL3Q9BXA9 1300 aa27.28■■□□□ 1.96
CACNB1-203ENST00000394310 USP42Q9H9J4 1324 aaKnown RBP27.28■■□□□ 1.96
CACNB1-203ENST00000394310 IRS4O14654 1257 aaPredicted RBP27.28■■□□□ 1.96
CACNB1-203ENST00000394310 G3BP1Q13283 466 aaKnown RBP eCLIP27.28■■□□□ 1.96
CACNB1-203ENST00000394310 USPL1Q5W0Q7 1092 aa27.28■■□□□ 1.96
CACNB1-203ENST00000394310 C16orf71Q8IYS4 520 aaPredicted RBP27.28■■□□□ 1.96
CACNB1-203ENST00000394310 PA2G4Q9UQ80 394 aaKnown RBP27.28■■□□□ 1.96
CACNB1-203ENST00000394310 BMP2KLQ5H9B9 411 aa27.27■■□□□ 1.96
CACNB1-203ENST00000394310 PDE8AO60658 829 aa27.27■■□□□ 1.96
CACNB1-203ENST00000394310 NTSR2O95665 410 aa27.27■■□□□ 1.96
CACNB1-203ENST00000394310 RFC4P35249 363 aa27.27■■□□□ 1.96
CACNB1-203ENST00000394310 FBXO3Q9UK99 471 aa27.26■■□□□ 1.95
CACNB1-203ENST00000394310 C4AP0C0L4 1744 aa27.26■■□□□ 1.95
CACNB1-203ENST00000394310 C8orf34Q49A92 452 aa27.25■■□□□ 1.95
CACNB1-203ENST00000394310 SYNE4Q8N205 404 aa27.25■■□□□ 1.95
CACNB1-203ENST00000394310 TTLL11Q8NHH1 800 aa27.25■■□□□ 1.95
CACNB1-203ENST00000394310 OS9Q13438 667 aaPredicted RBP27.25■■□□□ 1.95
CACNB1-203ENST00000394310 STAP2Q9UGK3 403 aa27.25■■□□□ 1.95
CACNB1-203ENST00000394310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.24■■□□□ 1.95
CACNB1-203ENST00000394310 SASH1O94885 1247 aa27.24■■□□□ 1.95
CACNB1-203ENST00000394310 CTSWP56202 376 aa27.24■■□□□ 1.95
CACNB1-203ENST00000394310 SRP68Q9UHB9 627 aaKnown RBP27.24■■□□□ 1.95
CACNB1-203ENST00000394310 MYH3P11055 1940 aa27.23■■□□□ 1.95
CACNB1-203ENST00000394310 TBC1D9BQ66K14 1250 aa27.23■■□□□ 1.95
CACNB1-203ENST00000394310 CCDC57Q2TAC2 916 aa27.22■■□□□ 1.95
CACNB1-203ENST00000394310 OTUD7AQ8TE49 926 aaPredicted RBP27.22■■□□□ 1.95
CACNB1-203ENST00000394310 AKT1S1Q96B36 256 aa27.22■■□□□ 1.95
CACNB1-203ENST00000394310 CIAO1O76071 339 aa27.22■■□□□ 1.95
CACNB1-203ENST00000394310 PDE1AP54750 535 aa27.22■■□□□ 1.95
CACNB1-203ENST00000394310 CLASRPQ8N2M8 674 aaKnown RBP27.22■■□□□ 1.95
CACNB1-203ENST00000394310 KLHDC4Q8TBB5 520 aa27.22■■□□□ 1.95
CACNB1-203ENST00000394310 SETDB2Q96T68 719 aa27.22■■□□□ 1.95
CACNB1-203ENST00000394310 AOX1Q06278 1338 aa27.21■■□□□ 1.95
CACNB1-203ENST00000394310 PHF14O94880 888 aa27.21■■□□□ 1.95
CACNB1-203ENST00000394310 SLC10A5Q5PT55 438 aa27.21■■□□□ 1.95
CACNB1-203ENST00000394310 NYXQ9GZU5 481 aa27.21■■□□□ 1.95
CACNB1-203ENST00000394310 IL1RAPL2Q9NP60 686 aa27.21■■□□□ 1.95
CACNB1-203ENST00000394310 CHMP3Q9Y3E7 222 aa27.21■■□□□ 1.95
CACNB1-203ENST00000394310 COL24A1Q17RW2 1714 aa27.2■■□□□ 1.95
CACNB1-203ENST00000394310 IFIT5Q13325 482 aaKnown RBP27.2■■□□□ 1.95
CACNB1-203ENST00000394310 MX1P20591 662 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms