RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 SLC52A2Q9HAB3 445 aa9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 RIC1Q4ADV7 1423 aa9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 SCN7AQ01118 1682 aa9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 NEURL1BA8MQ27 555 aa9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 HYPKQ9NX55 129 aa9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 TAF1LQ8IZX4 1826 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 STOX1Q6ZVD7 989 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 KRT28Q7Z3Y7 464 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 SLC51AQ86UW1 340 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 NOL7Q9UMY1 257 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 LTBP4Q8N2S1 1624 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 CHRNA2Q15822 529 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 DNAAF4Q8WXU2 420 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 ZC3H6P61129 1189 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 CAVIN1Q6NZI2 390 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 LRRCC1Q9C099 1032 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 DBNLQ9UJU6 430 aaKnown RBP9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 ZNF831Q5JPB2 1677 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 CCDC30Q5VVM6 783 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 SYNE4Q8N205 404 aa9.48□□□□□ -0.89
GAPVD1-207ENST00000394105 AOX1Q06278 1338 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 FAM177BA6PVY3 158 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 HSPA2P54652 639 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 TOB2Q14106 344 aaPredicted RBP9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 L1TD1Q5T7N2 865 aaKnown RBP9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 MCTP1Q6DN14 999 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 KIAA1211Q6ZU35 1233 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 DLEC1Q9Y238 1755 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 BTBD11A6QL63 1104 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 BPTFQ12830 3046 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 MPNDQ8N594 471 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 NBPF3Q9H094 633 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 DENND2AQ9ULE3 1009 aa9.47□□□□□ -0.89
GAPVD1-207ENST00000394105 SPG7Q9UQ90 795 aa9.46□□□□□ -0.89
GAPVD1-207ENST00000394105 ZNF530Q6P9A1 599 aaPredicted RBP9.46□□□□□ -0.89
GAPVD1-207ENST00000394105 SEC62Q99442 399 aaKnown RBP9.46□□□□□ -0.89
GAPVD1-207ENST00000394105 USPL1Q5W0Q7 1092 aa9.46□□□□□ -0.9
GAPVD1-207ENST00000394105 ILDR1Q86SU0 546 aaPredicted RBP9.46□□□□□ -0.9
GAPVD1-207ENST00000394105 PLEKHG2Q9H7P9 1386 aa9.46□□□□□ -0.9
GAPVD1-207ENST00000394105 ZNF830Q96NB3 372 aaPredicted RBP9.46□□□□□ -0.9
GAPVD1-207ENST00000394105 ADD1P35611 737 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 RBM10P98175 930 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 NKX1-1Q15270 411 aaPredicted RBP9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 SYCE3A1L190 88 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 ERC2O15083 957 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 EIF2S2P20042 333 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 KSR2Q6VAB6 950 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 C19orf44Q9H6X5 657 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 SRGAP3O43295 1099 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 PRPF40AO75400 957 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 GCKRQ14397 625 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 TTLL7Q6ZT98 887 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 HSCBQ8IWL3 235 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 DDX21Q9NR30 783 aaKnown RBP eCLIP9.45□□□□□ -0.93e-6■□□□□ 8.6
GAPVD1-207ENST00000394105 WTIPA6NIX2 430 aaPredicted RBP9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 NASPP49321 788 aaPredicted RBP9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 TPCN1Q9ULQ1 816 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 COL24A1Q17RW2 1714 aa9.45□□□□□ -0.9
GAPVD1-207ENST00000394105 CTDNEP1O95476 244 aa9.44□□□□□ -0.9
GAPVD1-207ENST00000394105 DDX54Q8TDD1 881 aaKnown RBP9.44□□□□□ -0.9
GAPVD1-207ENST00000394105 AK2P54819 239 aa9.44□□□□□ -0.9
GAPVD1-207ENST00000394105 MAP4K1Q92918 833 aa9.44□□□□□ -0.9
GAPVD1-207ENST00000394105 HTTP42858 3142 aa9.44□□□□□ -0.9
GAPVD1-207ENST00000394105 ZNF335Q9H4Z2 1342 aaPredicted RBP9.44□□□□□ -0.9
GAPVD1-207ENST00000394105 RABEP1Q15276 862 aa9.44□□□□□ -0.9
GAPVD1-207ENST00000394105 ME3Q16798 604 aa9.44□□□□□ -0.9
GAPVD1-207ENST00000394105 TNRC6CQ9HCJ0 1690 aaKnown RBP9.44□□□□□ -0.9
GAPVD1-207ENST00000394105 MYH13Q9UKX3 1938 aa9.44□□□□□ -0.9
GAPVD1-207ENST00000394105 VPS53Q5VIR6 699 aa9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 COL14A1Q05707 1796 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 ZSCAN30Q86W11 494 aa9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 ESF1Q9H501 851 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 TIAM2Q8IVF5 1701 aa9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 SCARF1Q14162 830 aa9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 SRCIN1Q9C0H9 1055 aa9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 ZSWIM6Q9HCJ5 1215 aa9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 DAXXQ9UER7 740 aaPredicted RBP9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 SALL1Q9NSC2 1324 aa9.43□□□□□ -0.9
GAPVD1-207ENST00000394105 SHISA4Q96DD7 197 aa9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 BAZ2AQ9UIF9 1905 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 LTBP1Q14766 1721 aa9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 KIAA1551Q9HCM1 1747 aa9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 AHDC1Q5TGY3 1603 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 PSME1Q06323 249 aa9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 KCNH5Q8NCM2 988 aa9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 AMIGO3Q86WK7 504 aa9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 DBF4Q9UBU7 674 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 GRM8O00222 908 aa9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 HSP90AB1P08238 724 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 LRSAM1Q6UWE0 723 aa9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 VGLL2Q8N8G2 317 aa9.42□□□□□ -0.9
GAPVD1-207ENST00000394105 SMIM22K7EJ46 135 aa9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 RRP9O43818 475 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 ZSCAN20P17040 1043 aaPredicted RBP9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 COPS6Q7L5N1 327 aa9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 TMEM87AQ8NBN3 555 aa9.41□□□□□ -0.9
GAPVD1-207ENST00000394105 XAGE3Q8WTP9 111 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms