RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 HOXA10P31260 410 aaPredicted RBP23.89■■□□□ 1.41
PDLIM7-205ENST00000393551 ZNF277Q9NRM2 450 aaPredicted RBP23.89■■□□□ 1.41
PDLIM7-205ENST00000393551 COPS6Q7L5N1 327 aa23.88■■□□□ 1.41
PDLIM7-205ENST00000393551 LAS1LQ9Y4W2 734 aaKnown RBP23.88■■□□□ 1.41
PDLIM7-205ENST00000393551 RTKN2Q8IZC4 609 aa23.87■■□□□ 1.41
PDLIM7-205ENST00000393551 XAGE3Q8WTP9 111 aa23.87■■□□□ 1.41
PDLIM7-205ENST00000393551 DDX21Q9NR30 783 aaKnown RBP eCLIP23.86■■□□□ 1.41
PDLIM7-205ENST00000393551 AIMP1Q12904 312 aaKnown RBP23.85■■□□□ 1.41
PDLIM7-205ENST00000393551 PARP10Q53GL7 1025 aa23.85■■□□□ 1.41
PDLIM7-205ENST00000393551 LAMB2P55268 1798 aa23.85■■□□□ 1.41
PDLIM7-205ENST00000393551 COL4A5P29400 1685 aa23.84■■□□□ 1.41
PDLIM7-205ENST00000393551 POTEIP0CG38 1075 aa23.84■■□□□ 1.41
PDLIM7-205ENST00000393551 POTEJP0CG39 1038 aa23.84■■□□□ 1.41
PDLIM7-205ENST00000393551 SLC10A5Q5PT55 438 aa23.84■■□□□ 1.41
PDLIM7-205ENST00000393551 PPP1R42Q7Z4L9 355 aa23.84■■□□□ 1.41
PDLIM7-205ENST00000393551 SYNE4Q8N205 404 aa23.84■■□□□ 1.41
PDLIM7-205ENST00000393551 RPGRQ92834 1020 aaKnown RBP23.84■■□□□ 1.41
PDLIM7-205ENST00000393551 CFAP44Q96MT7 982 aa23.84■■□□□ 1.41
PDLIM7-205ENST00000393551 CHPF2Q9P2E5 772 aa23.84■■□□□ 1.41
PDLIM7-205ENST00000393551 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
PDLIM7-205ENST00000393551 CRAMP1Q96RY5 1269 aa23.83■■□□□ 1.41
PDLIM7-205ENST00000393551 UTP14AQ9BVJ6 771 aaKnown RBP23.83■■□□□ 1.41
PDLIM7-205ENST00000393551 SCN4AP35499 1836 aa23.82■■□□□ 1.4
PDLIM7-205ENST00000393551 APAF1O14727 1248 aa23.82■■□□□ 1.4
PDLIM7-205ENST00000393551 ZNF853P0CG23 659 aa23.82■■□□□ 1.4
PDLIM7-205ENST00000393551 IARSP41252 1262 aaKnown RBP23.82■■□□□ 1.4
PDLIM7-205ENST00000393551 NLRP10Q86W26 655 aa23.82■■□□□ 1.4
PDLIM7-205ENST00000393551 KLRG1Q96E93 195 aa23.82■■□□□ 1.4
PDLIM7-205ENST00000393551 L3MBTL3Q96JM7 780 aaPredicted RBP23.82■■□□□ 1.4
PDLIM7-205ENST00000393551 PSMD1Q99460 953 aa23.82■■□□□ 1.4
PDLIM7-205ENST00000393551 MBIPQ9NS73 344 aa23.82■■□□□ 1.4
PDLIM7-205ENST00000393551 TCIRG1Q13488 830 aa23.81■■□□□ 1.4
PDLIM7-205ENST00000393551 CCDC184Q52MB2 194 aa23.81■■□□□ 1.4
PDLIM7-205ENST00000393551 FZD9O00144 591 aa23.8■■□□□ 1.4
PDLIM7-205ENST00000393551 HOXB7P09629 217 aa23.8■■□□□ 1.4
PDLIM7-205ENST00000393551 HDGFL1Q5TGJ6 251 aa23.8■■□□□ 1.4
PDLIM7-205ENST00000393551 RBM17Q96I25 401 aaKnown RBP23.8■■□□□ 1.4
PDLIM7-205ENST00000393551 DUSP27Q5VZP5 1158 aa23.79■■□□□ 1.4
PDLIM7-205ENST00000393551 CC2D2BQ6DHV5 1058 aa23.79■■□□□ 1.4
PDLIM7-205ENST00000393551 NLRP3Q96P20 1036 aa23.79■■□□□ 1.4
PDLIM7-205ENST00000393551 TAF1P21675 1872 aa23.79■■□□□ 1.4
PDLIM7-205ENST00000393551 TCERG1O14776 1098 aaKnown RBP23.78■■□□□ 1.4
PDLIM7-205ENST00000393551 PPEF1O14829 653 aaPredicted RBP23.78■■□□□ 1.4
PDLIM7-205ENST00000393551 HSP90AB3PQ58FF7 597 aa23.78■■□□□ 1.4
PDLIM7-205ENST00000393551 ZNF428Q96B54 188 aa23.78■■□□□ 1.4
PDLIM7-205ENST00000393551 HCLS1P14317 486 aaPredicted RBP23.77■■□□□ 1.4
PDLIM7-205ENST00000393551 JMYQ8N9B5 988 aa23.77■■□□□ 1.4
PDLIM7-205ENST00000393551 TAF1DQ9H5J8 278 aaPredicted RBP23.77■■□□□ 1.4
PDLIM7-205ENST00000393551 RNF123Q5XPI4 1314 aa23.77■■□□□ 1.4
PDLIM7-205ENST00000393551 CHADLQ6NUI6 762 aa23.76■■□□□ 1.39
PDLIM7-205ENST00000393551 DBF4Q9UBU7 674 aaPredicted RBP23.76■■□□□ 1.39
PDLIM7-205ENST00000393551 ABCC4O15439 1325 aa23.76■■□□□ 1.39
PDLIM7-205ENST00000393551 DDX60Q8IY21 1712 aaKnown RBP23.76■■□□□ 1.39
PDLIM7-205ENST00000393551 ANKRD13DQ6ZTN6 518 aa23.75■■□□□ 1.39
PDLIM7-205ENST00000393551 PLBD2Q8NHP8 589 aa23.75■■□□□ 1.39
PDLIM7-205ENST00000393551 TRMT112Q9UI30 125 aaKnown RBP23.75■■□□□ 1.39
PDLIM7-205ENST00000393551 ADAMTSL1Q8N6G6 1762 aa23.74■■□□□ 1.39
PDLIM7-205ENST00000393551 IQCA1LA6NCM1 817 aa23.74■■□□□ 1.39
PDLIM7-205ENST00000393551 ISCA1Q9BUE6 129 aa23.74■■□□□ 1.39
PDLIM7-205ENST00000393551 IFT57Q9NWB7 429 aa23.74■■□□□ 1.39
PDLIM7-205ENST00000393551 ATP6V0A2Q9Y487 856 aa23.74■■□□□ 1.39
PDLIM7-205ENST00000393551 SH3TC1Q8TE82 1336 aa23.73■■□□□ 1.39
PDLIM7-205ENST00000393551 LTBP1Q14766 1721 aa23.73■■□□□ 1.39
PDLIM7-205ENST00000393551 GRIPAP1Q4V328 841 aa23.72■■□□□ 1.39
PDLIM7-205ENST00000393551 JDP2Q8WYK2 163 aa23.72■■□□□ 1.39
PDLIM7-205ENST00000393551 HYPKQ9NX55 129 aa23.72■■□□□ 1.39
PDLIM7-205ENST00000393551 ATP5J2-PTCD1G3V325 749 aa23.71■■□□□ 1.39
PDLIM7-205ENST00000393551 ELL2O00472 640 aaPredicted RBP23.71■■□□□ 1.39
PDLIM7-205ENST00000393551 GNAI1P63096 354 aa23.71■■□□□ 1.39
PDLIM7-205ENST00000393551 GPC2Q8N158 579 aa23.71■■□□□ 1.39
PDLIM7-205ENST00000393551 C8orf58Q8NAV2 365 aa23.71■■□□□ 1.39
PDLIM7-205ENST00000393551 HACL1Q9UJ83 578 aa23.71■■□□□ 1.39
PDLIM7-205ENST00000393551 COL4A1P02462 1669 aa23.7■■□□□ 1.39
PDLIM7-205ENST00000393551 LDHDQ86WU2 507 aa23.7■■□□□ 1.38
PDLIM7-205ENST00000393551 PHAXQ9H814 394 aaKnown RBP23.7■■□□□ 1.38
PDLIM7-205ENST00000393551 PASKQ96RG2 1323 aa23.69■■□□□ 1.38
PDLIM7-205ENST00000393551 EPHX2P34913 555 aa23.69■■□□□ 1.38
PDLIM7-205ENST00000393551 LARGE2Q8N3Y3 721 aa23.69■■□□□ 1.38
PDLIM7-205ENST00000393551 FAM89AQ96GI7 184 aa23.69■■□□□ 1.38
PDLIM7-205ENST00000393551 BBOX1O75936 387 aa23.68■■□□□ 1.38
PDLIM7-205ENST00000393551 ITGBL1O95965 494 aaPredicted RBP23.68■■□□□ 1.38
PDLIM7-205ENST00000393551 IFFO2Q5TF58 517 aa23.68■■□□□ 1.38
PDLIM7-205ENST00000393551 SP8Q8IXZ3 490 aa23.68■■□□□ 1.38
PDLIM7-205ENST00000393551 RTFDC1Q9BY42 306 aaPredicted RBP23.68■■□□□ 1.38
PDLIM7-205ENST00000393551 AOC3Q16853 763 aa23.67■■□□□ 1.38
PDLIM7-205ENST00000393551 EAPPQ56P03 285 aaPredicted RBP23.67■■□□□ 1.38
PDLIM7-205ENST00000393551 SCNN1DP51172 638 aa23.66■■□□□ 1.38
PDLIM7-205ENST00000393551 EIF6P56537 245 aaKnown RBP23.66■■□□□ 1.38
PDLIM7-205ENST00000393551 CALD1Q05682 793 aaKnown RBP23.66■■□□□ 1.38
PDLIM7-205ENST00000393551 TRIM28Q13263 835 aaKnown RBP23.66■■□□□ 1.38
PDLIM7-205ENST00000393551 GRAPQ13588 217 aa23.66■■□□□ 1.38
PDLIM7-205ENST00000393551 DDX46Q7L014 1031 aaKnown RBP23.66■■□□□ 1.38
PDLIM7-205ENST00000393551 TSPYL6Q8N831 410 aa23.66■■□□□ 1.38
PDLIM7-205ENST00000393551 GRAPLQ8TC17 118 aaPredicted RBP23.66■■□□□ 1.38
PDLIM7-205ENST00000393551 GJA3Q9Y6H8 435 aa23.66■■□□□ 1.38
PDLIM7-205ENST00000393551 LRRC37AA6NMS7 1700 aa23.66■■□□□ 1.38
PDLIM7-205ENST00000393551 DUOX1Q9NRD9 1551 aa23.65■■□□□ 1.38
PDLIM7-205ENST00000393551 PPIP5K2O43314 1243 aa23.65■■□□□ 1.38
PDLIM7-205ENST00000393551 SF3B3Q15393 1217 aaKnown RBP23.64■■□□□ 1.37
PDLIM7-205ENST00000393551 RTL5Q5HYW3 569 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms