RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 RTEL1-TNFRSF6BF6WH68 1400 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 NSD3Q9BZ95 1437 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 ATF7IPQ6VMQ6 1270 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 RBM33Q96EV2 1170 aaKnown RBP8.83□□□□□ -1
VTI1A-201ENST00000393077 CABS1Q96KC9 395 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 SCAF11Q99590 1463 aaKnown RBP8.83□□□□□ -1
VTI1A-201ENST00000393077 CSB-PGBD3P0DP91 1061 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 SCP2P22307 547 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 ELF1P32519 619 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 CCDC30Q5VVM6 783 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 SDF4Q9BRK5 362 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 TACO1Q9BSH4 297 aaKnown RBP8.83□□□□□ -1
VTI1A-201ENST00000393077 SH3BP1Q9Y3L3 701 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 TTC37Q6PGP7 1564 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 ZNF75DP51815 510 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 GNG11P61952 73 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 DCTN1Q14203 1278 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 ENOX2Q16206 610 aaKnown RBP8.82□□□□□ -1
VTI1A-201ENST00000393077 ECM2O94769 699 aaPredicted RBP8.82□□□□□ -1
VTI1A-201ENST00000393077 NEFHP12036 1026 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 CEP85LQ5SZL2 805 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 CEP57L1Q8IYX8 460 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 GOLGA1Q92805 767 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 SYTL4Q96C24 671 aaPredicted RBP8.82□□□□□ -1
VTI1A-201ENST00000393077 C1orf115Q9H7X2 142 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 GOPCQ9HD26 462 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 H3BQV1 296 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 KIF4AO95239 1232 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 NLRP6P59044 892 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 IFFO2Q5TF58 517 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 UPF3BQ9BZI7 483 aaKnown RBP8.82□□□□□ -1
VTI1A-201ENST00000393077 TNNQ9UQP3 1299 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 SMARCA5O60264 1052 aaPredicted RBP8.82□□□□□ -1
VTI1A-201ENST00000393077 KINO60870 393 aaKnown RBP8.82□□□□□ -1
VTI1A-201ENST00000393077 NUCB1Q02818 461 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 SF3A1Q15459 793 aaKnown RBP8.82□□□□□ -1
VTI1A-201ENST00000393077 SUGP1Q8IWZ8 645 aaKnown RBP8.82□□□□□ -1
VTI1A-201ENST00000393077 TEX11Q8IYF3 940 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 AFAP1L1Q8TED9 768 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 NRBP1Q9UHY1 535 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.82□□□□□ -1
VTI1A-201ENST00000393077 SAMD9LQ8IVG5 1584 aa8.82□□□□□ -1
VTI1A-201ENST00000393077 NPC1L1Q9UHC9 1359 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 CAND2O75155 1236 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 SSBP05455 408 aaKnown RBP eCLIP8.81□□□□□ -1
VTI1A-201ENST00000393077 PPP2R3AQ06190 1150 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 PSME1Q06323 249 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 ARMCX6Q7L4S7 300 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 PLEKHA4Q9H4M7 779 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 TAOK2Q9UL54 1235 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 CAVIN2O95810 425 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 MAP9Q49MG5 647 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 MICAL1Q8TDZ2 1067 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 CCDC181Q5TID7 509 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 TMC6Q7Z403 805 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 JMYQ8N9B5 988 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 DNAJC25Q9H1X3 360 aa8.81□□□□□ -1
VTI1A-201ENST00000393077 SPINK5Q9NQ38 1064 aaPredicted RBP8.81□□□□□ -1
VTI1A-201ENST00000393077 NOB1Q9ULX3 412 aaKnown RBP8.81□□□□□ -1
VTI1A-201ENST00000393077 FBLN1P23142 703 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 PRKAR2BP31323 418 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 RRS1Q15050 365 aaKnown RBP8.8□□□□□ -1
VTI1A-201ENST00000393077 DBN1Q16643 649 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 CWC27Q6UX04 472 aaKnown RBP8.8□□□□□ -1
VTI1A-201ENST00000393077 CCDC150Q8NCX0 1101 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 NUDT16Q96DE0 195 aaKnown RBP8.8□□□□□ -1
VTI1A-201ENST00000393077 SPATA32Q96LK8 384 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 CCDC114Q96M63 670 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 ATP7AQ04656 1500 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 ARHGEF12Q9NZN5 1544 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 CHUKO15111 745 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 CTAGE5O15320 804 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 PPFIA4O75335 1185 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 DDIT3P35638 169 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 RWDD2BP57060 319 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 CORO7P57737 925 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 CCDC158Q5M9N0 1113 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 SWT1Q5T5J6 900 aaKnown RBP8.8□□□□□ -1
VTI1A-201ENST00000393077 TMEM57Q8N5G2 664 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 GPR161Q8N6U8 529 aaKnown RBP8.8□□□□□ -1
VTI1A-201ENST00000393077 CACTINQ8WUQ7 758 aaKnown RBP8.8□□□□□ -1
VTI1A-201ENST00000393077 FAM210AQ96ND0 272 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 RABEP2Q9H5N1 569 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 PDE11AQ9HCR9 933 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 DDX19AQ9NUU7 478 aaKnown RBP8.8□□□□□ -1
VTI1A-201ENST00000393077 MRFAP1Q9Y605 127 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 GCC2Q8IWJ2 1684 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 ATP2B2Q01814 1243 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 AKAP17AQ02040 695 aaKnown RBP8.8□□□□□ -1
VTI1A-201ENST00000393077 LRRFIP1Q32MZ4 808 aaKnown RBP8.8□□□□□ -1
VTI1A-201ENST00000393077 CNNM3Q8NE01 707 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 SAAL1Q96ER3 474 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 CCDC61Q9Y6R9 512 aa8.8□□□□□ -1
VTI1A-201ENST00000393077 STX6O43752 255 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 HSPA4P34932 840 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 B4GALNT4Q76KP1 1039 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 PARD3Q8TEW0 1356 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 EFCAB8A8MWE9 144 aa8.79□□□□□ -1
VTI1A-201ENST00000393077 BRD1O95696 1058 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms