RNA–Protein interactions for RNA: ENST00000392842.5

RFX4-203, Transcript of regulatory factor X4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX4, Length 3,955 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-203ENST00000392842 CCAR2Q8N163 923 aaKnown RBP7.57□□□□□ -1.2
RFX4-203ENST00000392842 BLMP54132 1417 aaPredicted RBP7.57□□□□□ -1.2
RFX4-203ENST00000392842 KRT85P78386 507 aa7.57□□□□□ -1.2
RFX4-203ENST00000392842 FAM196AQ6ZSG2 479 aa7.57□□□□□ -1.2
RFX4-203ENST00000392842 G2E3Q7L622 706 aa7.57□□□□□ -1.2
RFX4-203ENST00000392842 OTUD7AQ8TE49 926 aaPredicted RBP7.57□□□□□ -1.2
RFX4-203ENST00000392842 USP19O94966 1318 aa7.57□□□□□ -1.2
RFX4-203ENST00000392842 BAG6P46379 1132 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 VPS37DQ86XT2 251 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 STK11IPQ8N1F8 1099 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 PLEKHF1Q96S99 279 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 DCTPP1Q9H773 170 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 RBM27Q9P2N5 1060 aaKnown RBP7.56□□□□□ -1.2
RFX4-203ENST00000392842 DBF4Q9UBU7 674 aaPredicted RBP7.56□□□□□ -1.2
RFX4-203ENST00000392842 ATF5Q9Y2D1 282 aaPredicted RBP7.56□□□□□ -1.2
RFX4-203ENST00000392842 DCCP43146 1447 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 LOC102724428A0A0B4J2F2 783 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 SIK1P57059 783 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 HOMER1Q86YM7 354 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 SPATA31A5Q5VU36 1347 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 SPATA31A7Q8IWB4 1347 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 CAMK4Q16566 473 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 CDCA7Q9BWT1 371 aaPredicted RBP7.56□□□□□ -1.2
RFX4-203ENST00000392842 LAMC1P11047 1609 aa7.56□□□□□ -1.2
RFX4-203ENST00000392842 KINO60870 393 aaKnown RBP7.55□□□□□ -1.2
RFX4-203ENST00000392842 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 RAB11FIP3O75154 756 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 TPD52L1Q16890 204 aaPredicted RBP7.55□□□□□ -1.2
RFX4-203ENST00000392842 CEP85Q6P2H3 762 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 TMX3Q96JJ7 454 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 NCOA3Q9Y6Q9 1424 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 CDC42BPGQ6DT37 1551 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 ARHGEF28Q8N1W1 1705 aaKnown RBP7.55□□□□□ -1.2
RFX4-203ENST00000392842 CCDC192P0DO97 292 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 ME1P48163 572 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 ZSCAN30Q86W11 494 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 TNMDQ9H2S6 317 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 RTCBQ9Y3I0 505 aaKnown RBP7.55□□□□□ -1.2
RFX4-203ENST00000392842 USP31Q70CQ4 1352 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 OVOS2A0A0J9YW53 1432 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 OVOS2Q6IE36 1432 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 PROSER3Q2NL68 480 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 CWF19L2Q2TBE0 894 aaKnown RBP7.55□□□□□ -1.2
RFX4-203ENST00000392842 RRP12Q5JTH9 1297 aaKnown RBP7.55□□□□□ -1.2
RFX4-203ENST00000392842 ZGPATQ8N5A5 531 aaKnown RBP7.55□□□□□ -1.2
RFX4-203ENST00000392842 TCEANC2Q96MN5 208 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 MAP3K2Q9Y2U5 619 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 ZNF521Q96K83 1311 aa7.55□□□□□ -1.2
RFX4-203ENST00000392842 G3V3G9 751 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 LETM1O95202 739 aaPredicted RBP7.54□□□□□ -1.2
RFX4-203ENST00000392842 DCAF8Q5TAQ9 597 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 TRMT2AQ8IZ69 625 aaKnown RBP7.54□□□□□ -1.2
RFX4-203ENST00000392842 RHPN1Q8TCX5 695 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 SPATA32Q96LK8 384 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 ZBTB1Q9Y2K1 713 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 SSH2Q76I76 1423 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 ZBTB7AO95365 584 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 ANKRD1Q15327 319 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 CCDC57Q2TAC2 916 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 CCDC158Q5M9N0 1113 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 DZIP3Q86Y13 1208 aaKnown RBP7.54□□□□□ -1.2
RFX4-203ENST00000392842 CNNM1Q9NRU3 951 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 CEP126Q9P2H0 1117 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 TFIP11Q9UBB9 837 aaKnown RBP7.54□□□□□ -1.2
RFX4-203ENST00000392842 TRMT112Q9UI30 125 aaKnown RBP7.54□□□□□ -1.2
RFX4-203ENST00000392842 LIMCH1Q9UPQ0 1083 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 KLHL40Q2TBA0 621 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 ECHDC1Q9NTX5 307 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 MTMR7Q9Y216 660 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 CRB1P82279 1406 aa7.54□□□□□ -1.2
RFX4-203ENST00000392842 ERICH2A1L162 156 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 EZH2Q15910 746 aaKnown RBP7.53□□□□□ -1.2
RFX4-203ENST00000392842 TTLL7Q6ZT98 887 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 NIP7Q9Y221 180 aaKnown RBP eCLIP7.53□□□□□ -1.2
RFX4-203ENST00000392842 A0A087WZG4 1122 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 STK38Q15208 465 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 FNBP4Q8N3X1 1017 aaPredicted RBP7.53□□□□□ -1.2
RFX4-203ENST00000392842 SMARCC1Q92922 1105 aaPredicted RBP7.53□□□□□ -1.2
RFX4-203ENST00000392842 SNX21Q969T3 373 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 ZSCAN31Q96LW9 406 aaPredicted RBP7.53□□□□□ -1.2
RFX4-203ENST00000392842 SRP68Q9UHB9 627 aaKnown RBP7.53□□□□□ -1.2
RFX4-203ENST00000392842 DTNBO60941 627 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 R3HDM1Q15032 1099 aaKnown RBP7.53□□□□□ -1.2
RFX4-203ENST00000392842 SAFBQ15424 915 aaKnown RBP eCLIP7.53□□□□□ -1.2
RFX4-203ENST00000392842 TTC39AQ5SRH9 613 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 ANKRD13DQ6ZTN6 518 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 UBE3BQ7Z3V4 1068 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 USP25Q9UHP3 1055 aa7.53□□□□□ -1.2
RFX4-203ENST00000392842 EIF4A1P60842 406 aaKnown RBP7.52□□□□□ -1.2
RFX4-203ENST00000392842 TRAPPC3LQ5T215 181 aa7.52□□□□□ -1.2
RFX4-203ENST00000392842 NBPF14Q5TI25 921 aa7.52□□□□□ -1.2
RFX4-203ENST00000392842 STRCQ7RTU9 1775 aa7.52□□□□□ -1.2
RFX4-203ENST00000392842 ZNF622Q969S3 477 aaKnown RBP eCLIP7.52□□□□□ -1.2
RFX4-203ENST00000392842 ESYT1Q9BSJ8 1104 aa7.52□□□□□ -1.2
RFX4-203ENST00000392842 TMX4Q9H1E5 349 aaPredicted RBP7.52□□□□□ -1.2
RFX4-203ENST00000392842 STK32BQ9NY57 414 aa7.52□□□□□ -1.2
RFX4-203ENST00000392842 GUCY1B3Q02153 619 aa7.52□□□□□ -1.21
RFX4-203ENST00000392842 FILIP1Q7Z7B0 1213 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms