RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 SLC3A2P08195 630 aaKnown RBP19.75■□□□□ 0.75
TRAF3IP1-202ENST00000391993 TPM1P09493 284 aa19.75■□□□□ 0.75
TRAF3IP1-202ENST00000391993 UBASH3AP57075 661 aa19.75■□□□□ 0.75
TRAF3IP1-202ENST00000391993 ANKRD1Q15327 319 aa19.75■□□□□ 0.75
TRAF3IP1-202ENST00000391993 ME3Q16798 604 aa19.75■□□□□ 0.75
TRAF3IP1-202ENST00000391993 NPC1L1Q9UHC9 1359 aa19.74■□□□□ 0.75
TRAF3IP1-202ENST00000391993 LOC102724159A0A0B4J2E5 919 aa19.74■□□□□ 0.75
TRAF3IP1-202ENST00000391993 GLRX3O76003 335 aaKnown RBP19.74■□□□□ 0.75
TRAF3IP1-202ENST00000391993 PNMA6AP0CW24 399 aaPredicted RBP19.74■□□□□ 0.75
TRAF3IP1-202ENST00000391993 PWP2Q15269 919 aaKnown RBP19.74■□□□□ 0.75
TRAF3IP1-202ENST00000391993 MYO1CO00159 1063 aa19.74■□□□□ 0.75
TRAF3IP1-202ENST00000391993 HSP90AB4PQ58FF6 505 aa19.74■□□□□ 0.75
TRAF3IP1-202ENST00000391993 POLKQ9UBT6 870 aa19.74■□□□□ 0.75
TRAF3IP1-202ENST00000391993 TAF7Q15545 349 aaPredicted RBP19.74■□□□□ 0.75
TRAF3IP1-202ENST00000391993 ADCK5Q3MIX3 580 aa19.74■□□□□ 0.75
TRAF3IP1-202ENST00000391993 ZSCAN12O43309 604 aa19.73■□□□□ 0.75
TRAF3IP1-202ENST00000391993 FOXO3O43524 673 aa19.73■□□□□ 0.75
TRAF3IP1-202ENST00000391993 CHST3Q7LGC8 479 aa19.73■□□□□ 0.75
TRAF3IP1-202ENST00000391993 FAM107BQ9H098 131 aa19.73■□□□□ 0.75
TRAF3IP1-202ENST00000391993 NOS1P29475 1434 aa19.73■□□□□ 0.75
TRAF3IP1-202ENST00000391993 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
TRAF3IP1-202ENST00000391993 ST5P78524 1137 aa19.73■□□□□ 0.75
TRAF3IP1-202ENST00000391993 PPP2R3AQ06190 1150 aa19.73■□□□□ 0.75
TRAF3IP1-202ENST00000391993 FKBP15Q5T1M5 1219 aa19.73■□□□□ 0.75
TRAF3IP1-202ENST00000391993 RASSF8Q8NHQ8 419 aa19.73■□□□□ 0.75
TRAF3IP1-202ENST00000391993 C11orf57Q6ZUT1 292 aaPredicted RBP19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 SMARCC1Q92922 1105 aaPredicted RBP19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 PCMTD1Q96MG8 357 aaPredicted RBP19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 FTOQ9C0B1 505 aaKnown RBP eCLIP19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 CLSTN2Q9H4D0 955 aa19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 PA2G4Q9UQ80 394 aaKnown RBP19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 ABCC2Q92887 1545 aa19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 A0A1B0GUL7 405 aa19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 NGDNQ8NEJ9 315 aaKnown RBP19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 SMARCE1Q969G3 411 aa19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 XPO4Q9C0E2 1151 aaKnown RBP19.72■□□□□ 0.75
TRAF3IP1-202ENST00000391993 HINFPQ9BQA5 517 aa19.71■□□□□ 0.75
TRAF3IP1-202ENST00000391993 MARCKSP29966 332 aaPredicted RBP19.71■□□□□ 0.75
TRAF3IP1-202ENST00000391993 GIMAP7Q8NHV1 300 aa19.71■□□□□ 0.75
TRAF3IP1-202ENST00000391993 HSPA4P34932 840 aa19.71■□□□□ 0.75
TRAF3IP1-202ENST00000391993 PLEKHF1Q96S99 279 aa19.71■□□□□ 0.75
TRAF3IP1-202ENST00000391993 RRP15Q9Y3B9 282 aaKnown RBP19.71■□□□□ 0.75
TRAF3IP1-202ENST00000391993 TSR1Q2NL82 804 aaKnown RBP19.7■□□□□ 0.74
TRAF3IP1-202ENST00000391993 PPFIBP1Q86W92 1011 aa19.7■□□□□ 0.74
TRAF3IP1-202ENST00000391993 FEZ2Q9UHY8 353 aaPredicted RBP19.7■□□□□ 0.74
TRAF3IP1-202ENST00000391993 A0A0G2JS52 829 aa19.7■□□□□ 0.74
TRAF3IP1-202ENST00000391993 KIAA0754O94854 1291 aa19.7■□□□□ 0.74
TRAF3IP1-202ENST00000391993 CCDC150Q8NCX0 1101 aa19.7■□□□□ 0.74
TRAF3IP1-202ENST00000391993 CTIFO43310 598 aaKnown RBP19.69■□□□□ 0.74
TRAF3IP1-202ENST00000391993 PTH1RQ03431 593 aa19.69■□□□□ 0.74
TRAF3IP1-202ENST00000391993 OTUD7BQ6GQQ9 843 aa19.69■□□□□ 0.74
TRAF3IP1-202ENST00000391993 CRACR2AQ9BSW2 395 aa19.69■□□□□ 0.74
TRAF3IP1-202ENST00000391993 ABCC4O15439 1325 aa19.69■□□□□ 0.74
TRAF3IP1-202ENST00000391993 WASHC4Q2M389 1173 aa19.69■□□□□ 0.74
TRAF3IP1-202ENST00000391993 SGSM2O43147 1006 aa19.68■□□□□ 0.74
TRAF3IP1-202ENST00000391993 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.68■□□□□ 0.74
TRAF3IP1-202ENST00000391993 CTAGE5O15320 804 aa19.68■□□□□ 0.74
TRAF3IP1-202ENST00000391993 RNF187Q5TA31 235 aaPredicted RBP19.68■□□□□ 0.74
TRAF3IP1-202ENST00000391993 FAM227BQ96M60 508 aa19.67■□□□□ 0.74
TRAF3IP1-202ENST00000391993 CT47A1Q5JQC4 288 aaPredicted RBP19.67■□□□□ 0.74
TRAF3IP1-202ENST00000391993 CREB3L3Q68CJ9 461 aa19.67■□□□□ 0.74
TRAF3IP1-202ENST00000391993 TXNDC2Q86VQ3 553 aa19.67■□□□□ 0.74
TRAF3IP1-202ENST00000391993 ATP8B2P98198 1209 aa19.67■□□□□ 0.74
TRAF3IP1-202ENST00000391993 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
TRAF3IP1-202ENST00000391993 TPCN1Q9ULQ1 816 aa19.67■□□□□ 0.74
TRAF3IP1-202ENST00000391993 HDAC5Q9UQL6 1122 aa19.67■□□□□ 0.74
TRAF3IP1-202ENST00000391993 DESI2Q9BSY9 194 aa19.67■□□□□ 0.74
TRAF3IP1-202ENST00000391993 KIF5CO60282 957 aa19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 ATP2C2O75185 946 aa19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 IVLP07476 585 aa19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 NUP160Q12769 1436 aa19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 CBFA2T2O43439 604 aa19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 RBM6P78332 1123 aaKnown RBP19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 NDUFB9Q9Y6M9 179 aa19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 IPO7O95373 1038 aaKnown RBP19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 NAP1L1P55209 391 aaKnown RBP19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 TRIM29Q14134 588 aa19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 ECHDC1Q9NTX5 307 aa19.66■□□□□ 0.74
TRAF3IP1-202ENST00000391993 PTPRCP08575 1304 aa19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 NFXL1Q6ZNB6 911 aa19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 CCDC82Q8N4S0 544 aa19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 PLCD4Q9BRC7 762 aa19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 PDE11AQ9HCR9 933 aa19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 HOOK1Q9UJC3 728 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 DNA2P51530 1060 aa19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 CCDC70Q6NSX1 233 aa19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 EPB41L2O43491 1005 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 Q6ZUG5 572 aa19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 GOLGA1Q92805 767 aa19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 NCOA5Q9HCD5 579 aaKnown RBP19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 JRKLQ9Y4A0 524 aa19.65■□□□□ 0.74
TRAF3IP1-202ENST00000391993 RTL1A6NKG5 1358 aa19.64■□□□□ 0.74
TRAF3IP1-202ENST00000391993 PTPRTO14522 1441 aa19.64■□□□□ 0.74
TRAF3IP1-202ENST00000391993 LIG3P49916 1009 aa19.64■□□□□ 0.74
TRAF3IP1-202ENST00000391993 ETF1P62495 437 aaKnown RBP19.64■□□□□ 0.74
TRAF3IP1-202ENST00000391993 NMIQ13287 307 aaPredicted RBP19.64■□□□□ 0.74
TRAF3IP1-202ENST00000391993 WWC2Q6AWC2 1192 aa19.64■□□□□ 0.74
TRAF3IP1-202ENST00000391993 CTR9Q6PD62 1173 aa19.64■□□□□ 0.74
TRAF3IP1-202ENST00000391993 C14orf93Q9H972 538 aaKnown RBP19.64■□□□□ 0.74
TRAF3IP1-202ENST00000391993 VPS53Q5VIR6 699 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms