RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 ANKRD36CQ5JPF3 1778 aa30.74■■■□□ 2.51
SHOX2-201ENST00000389589 MAP3K15Q6ZN16 1313 aa30.74■■■□□ 2.51
SHOX2-201ENST00000389589 LMBR1LQ6UX01 489 aa30.74■■■□□ 2.51
SHOX2-201ENST00000389589 KLHDC4Q8TBB5 520 aa30.74■■■□□ 2.51
SHOX2-201ENST00000389589 EPB41L2O43491 1005 aaKnown RBP30.72■■■□□ 2.51
SHOX2-201ENST00000389589 RTL5Q5HYW3 569 aaPredicted RBP30.72■■■□□ 2.51
SHOX2-201ENST00000389589 EAF2Q96CJ1 260 aaPredicted RBP30.72■■■□□ 2.51
SHOX2-201ENST00000389589 CICQ96RK0 1608 aaPredicted RBP30.72■■■□□ 2.51
SHOX2-201ENST00000389589 VPS72Q15906 364 aa30.72■■■□□ 2.51
SHOX2-201ENST00000389589 ANTXR1Q9H6X2 564 aa30.72■■■□□ 2.51
SHOX2-201ENST00000389589 NGLY1Q96IV0 654 aa30.71■■■□□ 2.51
SHOX2-201ENST00000389589 HSP90AB3PQ58FF7 597 aa30.7■■■□□ 2.51
SHOX2-201ENST00000389589 GIGYF2Q6Y7W6 1299 aaKnown RBP30.7■■■□□ 2.51
SHOX2-201ENST00000389589 SLKQ9H2G2 1235 aaPredicted RBP30.7■■■□□ 2.51
SHOX2-201ENST00000389589 BCL9LQ86UU0 1499 aa30.69■■■□□ 2.5
SHOX2-201ENST00000389589 C8orf37Q96NL8 207 aa30.69■■■□□ 2.5
SHOX2-201ENST00000389589 NUP98P52948 1817 aa30.69■■■□□ 2.5
SHOX2-201ENST00000389589 MAP4K4O95819 1239 aaPredicted RBP30.69■■■□□ 2.5
SHOX2-201ENST00000389589 IL6STP40189 918 aaPredicted RBP30.69■■■□□ 2.5
SHOX2-201ENST00000389589 SPATA31A6Q5VVP1 1343 aa30.68■■■□□ 2.5
SHOX2-201ENST00000389589 ZBTB1Q9Y2K1 713 aa30.68■■■□□ 2.5
SHOX2-201ENST00000389589 MCCP23508 829 aa30.67■■■□□ 2.5
SHOX2-201ENST00000389589 PCCAP05165 728 aaPredicted RBP30.67■■■□□ 2.5
SHOX2-201ENST00000389589 ACSBG1Q96GR2 724 aa30.67■■■□□ 2.5
SHOX2-201ENST00000389589 CCDC8Q9H0W5 538 aaPredicted RBP30.67■■■□□ 2.5
SHOX2-201ENST00000389589 CHMP3Q9Y3E7 222 aa30.67■■■□□ 2.5
SHOX2-201ENST00000389589 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.67■■■□□ 2.5
SHOX2-201ENST00000389589 FNBP4Q8N3X1 1017 aaPredicted RBP30.66■■■□□ 2.5
SHOX2-201ENST00000389589 EVI5LQ96CN4 794 aa30.66■■■□□ 2.5
SHOX2-201ENST00000389589 ARXQ96QS3 562 aa30.66■■■□□ 2.5
SHOX2-201ENST00000389589 RREB1Q92766 1687 aa30.65■■■□□ 2.5
SHOX2-201ENST00000389589 ERVV-1B6SEH8 477 aa30.64■■■□□ 2.5
SHOX2-201ENST00000389589 ANO2Q9NQ90 1003 aa30.64■■■□□ 2.5
SHOX2-201ENST00000389589 A0A0G2JS52 829 aa30.64■■■□□ 2.5
SHOX2-201ENST00000389589 K7ELQ4 463 aaPredicted RBP30.64■■■□□ 2.5
SHOX2-201ENST00000389589 NFKBIBQ15653 356 aa30.64■■■□□ 2.5
SHOX2-201ENST00000389589 ZBTB38Q8NAP3 1195 aaPredicted RBP30.64■■■□□ 2.5
SHOX2-201ENST00000389589 SMARCC1Q92922 1105 aaPredicted RBP30.64■■■□□ 2.5
SHOX2-201ENST00000389589 PLA2G12BQ9BX93 195 aa30.64■■■□□ 2.5
SHOX2-201ENST00000389589 MYT1Q01538 1121 aa30.63■■■□□ 2.49
SHOX2-201ENST00000389589 TFCP2Q12800 502 aa30.63■■■□□ 2.49
SHOX2-201ENST00000389589 FAM98CQ17RN3 349 aaKnown RBP30.63■■■□□ 2.49
SHOX2-201ENST00000389589 TNNI3KQ59H18 835 aa30.63■■■□□ 2.49
SHOX2-201ENST00000389589 FPGT-TNNI3KV9GXZ4 949 aa30.63■■■□□ 2.49
SHOX2-201ENST00000389589 ZNF831Q5JPB2 1677 aa30.62■■■□□ 2.49
SHOX2-201ENST00000389589 SGSM2O43147 1006 aa30.62■■■□□ 2.49
SHOX2-201ENST00000389589 RUFY2Q8WXA3 655 aa30.62■■■□□ 2.49
SHOX2-201ENST00000389589 ANAPC15P60006 121 aa30.61■■■□□ 2.49
SHOX2-201ENST00000389589 TLR7Q9NYK1 1049 aaKnown RBP30.61■■■□□ 2.49
SHOX2-201ENST00000389589 CDHR2Q9BYE9 1310 aa30.61■■■□□ 2.49
SHOX2-201ENST00000389589 LOC102724428A0A0B4J2F2 783 aa30.61■■■□□ 2.49
SHOX2-201ENST00000389589 ATP6V1AP38606 617 aa30.61■■■□□ 2.49
SHOX2-201ENST00000389589 SIK1P57059 783 aa30.61■■■□□ 2.49
SHOX2-201ENST00000389589 HLFQ16534 295 aa30.61■■■□□ 2.49
SHOX2-201ENST00000389589 CCDC87Q9NVE4 849 aa30.61■■■□□ 2.49
SHOX2-201ENST00000389589 MYH3P11055 1940 aa30.6■■■□□ 2.49
SHOX2-201ENST00000389589 IL15P40933 162 aaPredicted RBP30.6■■■□□ 2.49
SHOX2-201ENST00000389589 DZIP3Q86Y13 1208 aaKnown RBP30.6■■■□□ 2.49
SHOX2-201ENST00000389589 SPRYD3Q8NCJ5 442 aa30.6■■■□□ 2.49
SHOX2-201ENST00000389589 DIAPH3Q9NSV4 1193 aa30.6■■■□□ 2.49
SHOX2-201ENST00000389589 HIP1O00291 1037 aa30.59■■■□□ 2.49
SHOX2-201ENST00000389589 CD2BP2O95400 341 aaKnown RBP30.59■■■□□ 2.49
SHOX2-201ENST00000389589 NLRP10Q86W26 655 aa30.59■■■□□ 2.49
SHOX2-201ENST00000389589 PALLDQ8WX93 1383 aa30.59■■■□□ 2.49
SHOX2-201ENST00000389589 ST18O60284 1047 aa30.59■■■□□ 2.49
SHOX2-201ENST00000389589 CIAO1O76071 339 aa30.59■■■□□ 2.49
SHOX2-201ENST00000389589 GPR108Q9NPR9 543 aa30.59■■■□□ 2.49
SHOX2-201ENST00000389589 CHMP5Q9NZZ3 219 aa30.59■■■□□ 2.49
SHOX2-201ENST00000389589 EIF5P55010 431 aaKnown RBP30.58■■■□□ 2.49
SHOX2-201ENST00000389589 IL17RAQ96F46 866 aa30.58■■■□□ 2.49
SHOX2-201ENST00000389589 ATG9AQ7Z3C6 839 aa30.58■■■□□ 2.49
SHOX2-201ENST00000389589 FBXO3Q9UK99 471 aa30.58■■■□□ 2.49
SHOX2-201ENST00000389589 EYA2O00167 538 aa30.57■■■□□ 2.48
SHOX2-201ENST00000389589 INTS5Q6P9B9 1019 aaKnown RBP30.57■■■□□ 2.48
SHOX2-201ENST00000389589 ATP5JP18859 108 aa30.56■■■□□ 2.48
SHOX2-201ENST00000389589 CCDC57Q2TAC2 916 aa30.56■■■□□ 2.48
SHOX2-201ENST00000389589 CERKQ8TCT0 537 aa30.56■■■□□ 2.48
SHOX2-201ENST00000389589 FAM89AQ96GI7 184 aa30.56■■■□□ 2.48
SHOX2-201ENST00000389589 DBNLQ9UJU6 430 aaKnown RBP30.56■■■□□ 2.48
SHOX2-201ENST00000389589 COL5A3P25940 1745 aaPredicted RBP30.56■■■□□ 2.48
SHOX2-201ENST00000389589 CRKLP46109 303 aaKnown RBP30.56■■■□□ 2.48
SHOX2-201ENST00000389589 IL27Q8NEV9 243 aa30.56■■■□□ 2.48
SHOX2-201ENST00000389589 USP21Q9UK80 565 aa30.56■■■□□ 2.48
SHOX2-201ENST00000389589 CSF1RP07333 972 aa30.55■■■□□ 2.48
SHOX2-201ENST00000389589 KIAA1211Q6ZU35 1233 aa30.55■■■□□ 2.48
SHOX2-201ENST00000389589 MYH14Q7Z406 1995 aaKnown RBP30.55■■■□□ 2.48
SHOX2-201ENST00000389589 CWC27Q6UX04 472 aaKnown RBP30.54■■■□□ 2.48
SHOX2-201ENST00000389589 IL25Q9H293 177 aa30.54■■■□□ 2.48
SHOX2-201ENST00000389589 RAD50Q92878 1312 aa30.54■■■□□ 2.48
SHOX2-201ENST00000389589 GPTP24298 496 aa30.54■■■□□ 2.48
SHOX2-201ENST00000389589 BOLA2Q9H3K6 86 aa30.54■■■□□ 2.48
SHOX2-201ENST00000389589 TBC1D2BQ9UPU7 963 aa30.54■■■□□ 2.48
SHOX2-201ENST00000389589 THSD7AQ9UPZ6 1657 aa30.53■■■□□ 2.48
SHOX2-201ENST00000389589 HSP90AA1P07900 732 aaKnown RBP30.53■■■□□ 2.48
SHOX2-201ENST00000389589 HSPA4P34932 840 aa30.52■■■□□ 2.48
SHOX2-201ENST00000389589 DDIT3P35638 169 aa30.52■■■□□ 2.48
SHOX2-201ENST00000389589 ITPK1Q13572 414 aa30.52■■■□□ 2.48
SHOX2-201ENST00000389589 CIZ1Q9ULV3 898 aaPredicted RBP30.52■■■□□ 2.48
SHOX2-201ENST00000389589 KCNQ2O43526 872 aa30.51■■■□□ 2.48
SHOX2-201ENST00000389589 ZNF34Q8IZ26 560 aa30.51■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms