RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 GIGYF1O75420 1035 aaPredicted RBP15.46■□□□□ 0.07
PTPRN2-202ENST00000389416 SOGA3Q5TF21 947 aa15.46■□□□□ 0.07
PTPRN2-202ENST00000389416 TFCP2Q12800 502 aa15.46■□□□□ 0.07
PTPRN2-202ENST00000389416 TSR1Q2NL82 804 aaKnown RBP15.46■□□□□ 0.07
PTPRN2-202ENST00000389416 BRINP3Q76B58 766 aa15.46■□□□□ 0.07
PTPRN2-202ENST00000389416 CCAR1Q8IX12 1150 aaKnown RBP15.46■□□□□ 0.07
PTPRN2-202ENST00000389416 PCMTD1Q96MG8 357 aaPredicted RBP15.46■□□□□ 0.07
PTPRN2-202ENST00000389416 PLEKHF1Q96S99 279 aa15.46■□□□□ 0.07
PTPRN2-202ENST00000389416 CCDC24Q8N4L8 307 aa15.46■□□□□ 0.06
PTPRN2-202ENST00000389416 NYXQ9GZU5 481 aa15.46■□□□□ 0.06
PTPRN2-202ENST00000389416 BLMP54132 1417 aaPredicted RBP15.45■□□□□ 0.06
PTPRN2-202ENST00000389416 ZMYM4Q5VZL5 1548 aa15.45■□□□□ 0.06
PTPRN2-202ENST00000389416 ERVV-2B6SEH9 535 aa15.45■□□□□ 0.06
PTPRN2-202ENST00000389416 ZNF287Q9HBT7 754 aa15.45■□□□□ 0.06
PTPRN2-202ENST00000389416 IQCA1Q86XH1 822 aa15.45■□□□□ 0.06
PTPRN2-202ENST00000389416 ZNF444Q8N0Y2 327 aaPredicted RBP15.45■□□□□ 0.06
PTPRN2-202ENST00000389416 ANKRD20A12PQ8NF67 263 aa15.45■□□□□ 0.06
PTPRN2-202ENST00000389416 TBC1D2Q9BYX2 928 aa15.45■□□□□ 0.06
PTPRN2-202ENST00000389416 SH3TC1Q8TE82 1336 aa15.45■□□□□ 0.06
PTPRN2-202ENST00000389416 IFIT3O14879 490 aaKnown RBP15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 PPFIA3O75145 1194 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 TPM2P07951 284 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 TIMM10P62072 90 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 IGSF1Q8N6C5 1336 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 LDHCP07864 332 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 ERBB3P21860 1342 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 CCT2P78371 535 aaKnown RBP15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 TCEANC2Q96MN5 208 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 CCDC87Q9NVE4 849 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 TPM1P09493 284 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 SLC9C2Q5TAH2 1124 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 JMYQ8N9B5 988 aa15.44■□□□□ 0.06
PTPRN2-202ENST00000389416 F8W031 263 aaPredicted RBP15.43■□□□□ 0.06
PTPRN2-202ENST00000389416 UNC13BO14795 1591 aa15.43■□□□□ 0.06
PTPRN2-202ENST00000389416 CYP7A1P22680 504 aa15.43■□□□□ 0.06
PTPRN2-202ENST00000389416 GUCY1B3Q02153 619 aa15.43■□□□□ 0.06
PTPRN2-202ENST00000389416 SLF2Q8IX21 1173 aa15.43■□□□□ 0.06
PTPRN2-202ENST00000389416 CCDC191Q8NCU4 936 aa15.43■□□□□ 0.06
PTPRN2-202ENST00000389416 LIMCH1Q9UPQ0 1083 aa15.43■□□□□ 0.06
PTPRN2-202ENST00000389416 TPM3P06753 285 aa15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 FAM182BQ5T319 152 aa15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 RAB11FIP4Q86YS3 637 aa15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 OTUD7AQ8TE49 926 aaPredicted RBP15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 ZNF594Q96JF6 807 aaPredicted RBP15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 CARD10Q9BWT7 1032 aa15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 BAG3O95817 575 aa15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 HMGB1P09429 215 aaKnown RBP15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 PLEKHM2Q8IWE5 1019 aa15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 CIZ1Q9ULV3 898 aaPredicted RBP15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 PNMA6EA0A0J9YXQ4 647 aa15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 GCKRQ14397 625 aa15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 JAG2Q9Y219 1238 aa15.42■□□□□ 0.06
PTPRN2-202ENST00000389416 SUCLG2Q96I99 432 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 CDK5RAP3Q96JB5 506 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 PARP3Q9Y6F1 533 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 TXLNAP40222 546 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 PDE4CQ08493 712 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 TBC1D32Q96NH3 1257 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 SPTY2D1Q68D10 685 aaPredicted RBP15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 CNBD1Q8NA66 436 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 CTCFLQ8NI51 663 aaPredicted RBP15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 SPATA32Q96LK8 384 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 ESYT1Q9BSJ8 1104 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 ITGA6P23229 1130 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 NEK1Q96PY6 1258 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 ZC3H12CQ9C0D7 883 aaKnown RBP15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 PAG1Q9NWQ8 432 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 SLC12A7Q9Y666 1083 aa15.41■□□□□ 0.06
PTPRN2-202ENST00000389416 GOLGA8BA8MQT2 603 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 ASAP1Q9ULH1 1129 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 LRRC2Q9BYS8 371 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 WDR17Q8IZU2 1322 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 ZFYP08048 801 aaPredicted RBP15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 PARP10Q53GL7 1025 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 OLFM4Q6UX06 510 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 CCDC144CPQ8IYA2 1237 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 ANO8Q9HCE9 1232 aaPredicted RBP15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 SH2B1Q9NRF2 756 aaPredicted RBP15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 SYNMO15061 1565 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 EYA2O00167 538 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 MCM4P33991 863 aa15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 RBM8AQ9Y5S9 174 aaKnown RBP15.4■□□□□ 0.06
PTPRN2-202ENST00000389416 LRRIQ1Q96JM4 1722 aa15.39■□□□□ 0.05
PTPRN2-202ENST00000389416 NAA16Q6N069 864 aaPredicted RBP15.39■□□□□ 0.05
PTPRN2-202ENST00000389416 TSPY2A6NKD2 308 aa15.39■□□□□ 0.05
PTPRN2-202ENST00000389416 MICU3Q86XE3 530 aa15.39■□□□□ 0.05
PTPRN2-202ENST00000389416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.39■□□□□ 0.058e-7■■□□□ 12.5
PTPRN2-202ENST00000389416 NOL7Q9UMY1 257 aaKnown RBP15.39■□□□□ 0.05
PTPRN2-202ENST00000389416 CCDC196A0A1B0GTZ2 297 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 NMIQ13287 307 aaPredicted RBP15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 MCMDC2Q4G0Z9 681 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 MFSD6Q6ZSS7 791 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 ALKQ9UM73 1620 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 APBA3O96018 575 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 NBPF14Q5TI25 921 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 TMEM67Q5HYA8 995 aa15.38■□□□□ 0.05
PTPRN2-202ENST00000389416 WASF1Q92558 559 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms