RNA–Protein interactions for RNA: ENST00000386847.1

SNORA48-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48-201ENST00000386847 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
SNORA48-201ENST00000386847 HSPA1AP0DMV8 641 aaKnown RBP12.47□□□□□ -0.41
SNORA48-201ENST00000386847 HSPA1BP0DMV9 641 aaKnown RBP12.47□□□□□ -0.41
SNORA48-201ENST00000386847 EPHX2P34913 555 aa12.47□□□□□ -0.41
SNORA48-201ENST00000386847 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
SNORA48-201ENST00000386847 LARGE2Q8N3Y3 721 aa12.47□□□□□ -0.41
SNORA48-201ENST00000386847 UTP14AQ9BVJ6 771 aaKnown RBP12.47□□□□□ -0.41
SNORA48-201ENST00000386847 RNF123Q5XPI4 1314 aa12.46□□□□□ -0.41
SNORA48-201ENST00000386847 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.41
SNORA48-201ENST00000386847 HOXA10P31260 410 aaPredicted RBP12.46□□□□□ -0.41
SNORA48-201ENST00000386847 SUSD4Q5VX71 490 aa12.46□□□□□ -0.41
SNORA48-201ENST00000386847 NIM1KQ8IY84 436 aa12.46□□□□□ -0.41
SNORA48-201ENST00000386847 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.41
SNORA48-201ENST00000386847 AIDAQ96BJ3 306 aa12.46□□□□□ -0.41
SNORA48-201ENST00000386847 CRAMP1Q96RY5 1269 aa12.46□□□□□ -0.41
SNORA48-201ENST00000386847 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.41
SNORA48-201ENST00000386847 GJA3Q9Y6H8 435 aa12.46□□□□□ -0.41
SNORA48-201ENST00000386847 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.42
SNORA48-201ENST00000386847 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
SNORA48-201ENST00000386847 ABCC12Q96J65 1359 aa12.45□□□□□ -0.42
SNORA48-201ENST00000386847 ZNF541Q9H0D2 1346 aa12.45□□□□□ -0.42
SNORA48-201ENST00000386847 FZD9O00144 591 aa12.45□□□□□ -0.42
SNORA48-201ENST00000386847 TCERG1O14776 1098 aaKnown RBP12.45□□□□□ -0.42
SNORA48-201ENST00000386847 NEUROD2Q15784 382 aa12.45□□□□□ -0.42
SNORA48-201ENST00000386847 COL13A1Q5TAT6 717 aaPredicted RBP12.45□□□□□ -0.42
SNORA48-201ENST00000386847 OLFM4Q6UX06 510 aa12.45□□□□□ -0.42
SNORA48-201ENST00000386847 ZNF34Q8IZ26 560 aa12.45□□□□□ -0.42
SNORA48-201ENST00000386847 SCN4AP35499 1836 aa12.45□□□□□ -0.42
SNORA48-201ENST00000386847 UBN2Q6ZU65 1347 aa12.44□□□□□ -0.42
SNORA48-201ENST00000386847 MYBBP1AQ9BQG0 1328 aaKnown RBP12.44□□□□□ -0.42
SNORA48-201ENST00000386847 TMPOP42166 694 aaKnown RBP12.44□□□□□ -0.42
SNORA48-201ENST00000386847 VPS33BQ9H267 617 aa12.44□□□□□ -0.42
SNORA48-201ENST00000386847 LAS1LQ9Y4W2 734 aaKnown RBP12.44□□□□□ -0.42
SNORA48-201ENST00000386847 DLG5Q8TDM6 1919 aa12.44□□□□□ -0.42
SNORA48-201ENST00000386847 PPIP5K2O43314 1243 aa12.43□□□□□ -0.42
SNORA48-201ENST00000386847 NTSR2O95665 410 aa12.43□□□□□ -0.42
SNORA48-201ENST00000386847 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
SNORA48-201ENST00000386847 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
SNORA48-201ENST00000386847 AIMP1Q12904 312 aaKnown RBP12.43□□□□□ -0.42
SNORA48-201ENST00000386847 CAPN15O75808 1086 aa12.42□□□□□ -0.42
SNORA48-201ENST00000386847 BBOX1O75936 387 aa12.42□□□□□ -0.42
SNORA48-201ENST00000386847 DDX46Q7L014 1031 aaKnown RBP12.42□□□□□ -0.42
SNORA48-201ENST00000386847 COPS6Q7L5N1 327 aa12.42□□□□□ -0.42
SNORA48-201ENST00000386847 CNTROBQ8N137 903 aa12.42□□□□□ -0.42
SNORA48-201ENST00000386847 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
SNORA48-201ENST00000386847 RUNDC1Q96C34 613 aa12.42□□□□□ -0.42
SNORA48-201ENST00000386847 TRMT112Q9UI30 125 aaKnown RBP12.42□□□□□ -0.42
SNORA48-201ENST00000386847 ABT1Q9ULW3 272 aaKnown RBP12.42□□□□□ -0.42
SNORA48-201ENST00000386847 CNTNAP1P78357 1384 aa12.42□□□□□ -0.42
SNORA48-201ENST00000386847 NUP98P52948 1817 aa12.41□□□□□ -0.42
SNORA48-201ENST00000386847 SH3TC1Q8TE82 1336 aa12.41□□□□□ -0.42
SNORA48-201ENST00000386847 PASKQ96RG2 1323 aa12.41□□□□□ -0.42
SNORA48-201ENST00000386847 DDX10Q13206 875 aaKnown RBP12.41□□□□□ -0.42
SNORA48-201ENST00000386847 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
SNORA48-201ENST00000386847 DPP8Q6V1X1 898 aaPredicted RBP12.41□□□□□ -0.42
SNORA48-201ENST00000386847 TMC4Q7Z404 712 aa12.41□□□□□ -0.42
SNORA48-201ENST00000386847 DDX21Q9NR30 783 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNORA48-201ENST00000386847 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
SNORA48-201ENST00000386847 HSP90B1P14625 803 aaKnown RBP12.4□□□□□ -0.42
SNORA48-201ENST00000386847 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
SNORA48-201ENST00000386847 DEFB115Q30KQ5 88 aa12.4□□□□□ -0.42
SNORA48-201ENST00000386847 SLC10A5Q5PT55 438 aa12.4□□□□□ -0.42
SNORA48-201ENST00000386847 HDGFL1Q5TGJ6 251 aa12.4□□□□□ -0.42
SNORA48-201ENST00000386847 PAXIP1Q6ZW49 1069 aaPredicted RBP12.4□□□□□ -0.42
SNORA48-201ENST00000386847 USP50Q70EL3 339 aaPredicted RBP12.4□□□□□ -0.42
SNORA48-201ENST00000386847 CCDC146Q8IYE0 955 aa12.4□□□□□ -0.42
SNORA48-201ENST00000386847 XAGE3Q8WTP9 111 aa12.4□□□□□ -0.42
SNORA48-201ENST00000386847 BEGAINQ9BUH8 593 aa12.4□□□□□ -0.42
SNORA48-201ENST00000386847 CHMP4AQ9BY43 222 aa12.4□□□□□ -0.42
SNORA48-201ENST00000386847 DBF4Q9UBU7 674 aaPredicted RBP12.4□□□□□ -0.42
SNORA48-201ENST00000386847 ABCC4O15439 1325 aa12.39□□□□□ -0.43
SNORA48-201ENST00000386847 ITGBL1O95965 494 aaPredicted RBP12.39□□□□□ -0.43
SNORA48-201ENST00000386847 ANXA1P04083 346 aa12.39□□□□□ -0.43
SNORA48-201ENST00000386847 HOXB7P09629 217 aa12.39□□□□□ -0.43
SNORA48-201ENST00000386847 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
SNORA48-201ENST00000386847 TNIP1Q15025 636 aa12.39□□□□□ -0.43
SNORA48-201ENST00000386847 MPNDQ8N594 471 aa12.39□□□□□ -0.43
SNORA48-201ENST00000386847 BCL2L13Q9BXK5 485 aa12.39□□□□□ -0.43
SNORA48-201ENST00000386847 ZNRF3Q9ULT6 936 aa12.39□□□□□ -0.43
SNORA48-201ENST00000386847 ECE1P42892 770 aa12.38□□□□□ -0.43
SNORA48-201ENST00000386847 CTCFP49711 727 aaPredicted RBP12.38□□□□□ -0.43
SNORA48-201ENST00000386847 MAP2K1Q02750 393 aaPredicted RBP12.38□□□□□ -0.43
SNORA48-201ENST00000386847 GRAPQ13588 217 aa12.38□□□□□ -0.43
SNORA48-201ENST00000386847 PDIA6Q15084 440 aa12.38□□□□□ -0.43
SNORA48-201ENST00000386847 AOC3Q16853 763 aa12.38□□□□□ -0.43
SNORA48-201ENST00000386847 PROSER3Q2NL68 480 aa12.38□□□□□ -0.43
SNORA48-201ENST00000386847 ANKRD13DQ6ZTN6 518 aa12.38□□□□□ -0.43
SNORA48-201ENST00000386847 NLRP10Q86W26 655 aa12.38□□□□□ -0.43
SNORA48-201ENST00000386847 SP8Q8IXZ3 490 aa12.38□□□□□ -0.43
SNORA48-201ENST00000386847 GRAPLQ8TC17 118 aaPredicted RBP12.38□□□□□ -0.43
SNORA48-201ENST00000386847 ADARB2Q9NS39 739 aaKnown RBP12.38□□□□□ -0.43
SNORA48-201ENST00000386847 CHL1O00533 1208 aa12.37□□□□□ -0.43
SNORA48-201ENST00000386847 HCLS1P14317 486 aaPredicted RBP12.37□□□□□ -0.43
SNORA48-201ENST00000386847 VEGFBP49765 207 aa12.37□□□□□ -0.43
SNORA48-201ENST00000386847 PLBD2Q8NHP8 589 aa12.37□□□□□ -0.43
SNORA48-201ENST00000386847 HYPKQ9NX55 129 aa12.37□□□□□ -0.43
SNORA48-201ENST00000386847 CHPF2Q9P2E5 772 aa12.37□□□□□ -0.43
SNORA48-201ENST00000386847 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
SNORA48-201ENST00000386847 RASSF10A6NK89 507 aa12.36□□□□□ -0.43
SNORA48-201ENST00000386847 EPS15P42566 896 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms