RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 FOXO4P98177 505 aa25.03■■□□□ 1.6
CPNE9-202ENST00000383831 HSP90AB3PQ58FF7 597 aa25.03■■□□□ 1.6
CPNE9-202ENST00000383831 RFX5P48382 616 aaPredicted RBP25.02■■□□□ 1.6
CPNE9-202ENST00000383831 TSHZ3Q63HK5 1081 aa25.02■■□□□ 1.6
CPNE9-202ENST00000383831 ERC1Q8IUD2 1116 aa25.02■■□□□ 1.6
CPNE9-202ENST00000383831 LINC00116Q8NCU8 138 aa25.02■■□□□ 1.6
CPNE9-202ENST00000383831 LMBR1LQ6UX01 489 aa25.01■■□□□ 1.59
CPNE9-202ENST00000383831 NUTM1Q86Y26 1132 aa25.01■■□□□ 1.59
CPNE9-202ENST00000383831 KLHDC4Q8TBB5 520 aa25.01■■□□□ 1.59
CPNE9-202ENST00000383831 STAP2Q9UGK3 403 aa25.01■■□□□ 1.59
CPNE9-202ENST00000383831 G3BP1Q13283 466 aaKnown RBP eCLIP25■■□□□ 1.59
CPNE9-202ENST00000383831 GPTP24298 496 aa25■■□□□ 1.59
CPNE9-202ENST00000383831 KCNQ4P56696 695 aa25■■□□□ 1.59
CPNE9-202ENST00000383831 TUBGCP6Q96RT7 1819 aa25■■□□□ 1.59
CPNE9-202ENST00000383831 CDC45O75419 566 aa24.99■■□□□ 1.59
CPNE9-202ENST00000383831 PCCAP05165 728 aaPredicted RBP24.99■■□□□ 1.59
CPNE9-202ENST00000383831 SDSP20132 328 aa24.99■■□□□ 1.59
CPNE9-202ENST00000383831 TBC1D9Q6ZT07 1266 aa24.99■■□□□ 1.59
CPNE9-202ENST00000383831 NLRP10Q86W26 655 aa24.99■■□□□ 1.59
CPNE9-202ENST00000383831 SIL1Q9H173 461 aa24.99■■□□□ 1.59
CPNE9-202ENST00000383831 UPF2Q9HAU5 1272 aaKnown RBP24.99■■□□□ 1.59
CPNE9-202ENST00000383831 COPRSQ9NQ92 184 aa24.99■■□□□ 1.59
CPNE9-202ENST00000383831 SASH1O94885 1247 aa24.98■■□□□ 1.59
CPNE9-202ENST00000383831 MFAP1P55081 439 aaKnown RBP24.98■■□□□ 1.59
CPNE9-202ENST00000383831 PTPN12Q05209 780 aaKnown RBP24.98■■□□□ 1.59
CPNE9-202ENST00000383831 ZBTB38Q8NAP3 1195 aaPredicted RBP24.98■■□□□ 1.59
CPNE9-202ENST00000383831 IPO9Q96P70 1041 aaKnown RBP24.98■■□□□ 1.59
CPNE9-202ENST00000383831 AOX1Q06278 1338 aa24.98■■□□□ 1.59
CPNE9-202ENST00000383831 CLASRPQ8N2M8 674 aaKnown RBP24.97■■□□□ 1.59
CPNE9-202ENST00000383831 FAM89AQ96GI7 184 aa24.97■■□□□ 1.59
CPNE9-202ENST00000383831 BRWD3Q6RI45 1802 aa24.97■■□□□ 1.59
CPNE9-202ENST00000383831 CHMP3Q9Y3E7 222 aa24.96■■□□□ 1.59
CPNE9-202ENST00000383831 CNTNAP4Q9C0A0 1308 aa24.96■■□□□ 1.59
CPNE9-202ENST00000383831 LY75O60449 1722 aa24.96■■□□□ 1.59
CPNE9-202ENST00000383831 CAMTA2O94983 1202 aa24.95■■□□□ 1.59
CPNE9-202ENST00000383831 ZNF34Q8IZ26 560 aa24.95■■□□□ 1.59
CPNE9-202ENST00000383831 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.95■■□□□ 1.59
CPNE9-202ENST00000383831 MSH5O43196 834 aa24.95■■□□□ 1.58
CPNE9-202ENST00000383831 TBC1D32Q96NH3 1257 aa24.95■■□□□ 1.58
CPNE9-202ENST00000383831 UBN2Q6ZU65 1347 aa24.95■■□□□ 1.58
CPNE9-202ENST00000383831 PLA2G12BQ9BX93 195 aa24.94■■□□□ 1.58
CPNE9-202ENST00000383831 CDHR2Q9BYE9 1310 aa24.94■■□□□ 1.58
CPNE9-202ENST00000383831 CCNL1Q9UK58 526 aaPredicted RBP24.93■■□□□ 1.58
CPNE9-202ENST00000383831 USP42Q9H9J4 1324 aaKnown RBP24.93■■□□□ 1.58
CPNE9-202ENST00000383831 BCORQ6W2J9 1755 aa24.93■■□□□ 1.58
CPNE9-202ENST00000383831 SYNE4Q8N205 404 aa24.93■■□□□ 1.58
CPNE9-202ENST00000383831 PI4K2BQ8TCG2 481 aa24.93■■□□□ 1.58
CPNE9-202ENST00000383831 BCL11BQ9C0K0 894 aaPredicted RBP24.92■■□□□ 1.58
CPNE9-202ENST00000383831 ZNF772Q68DY9 489 aaPredicted RBP24.91■■□□□ 1.58
CPNE9-202ENST00000383831 KRT27Q7Z3Y8 459 aa24.91■■□□□ 1.58
CPNE9-202ENST00000383831 AACSQ86V21 672 aa24.91■■□□□ 1.58
CPNE9-202ENST00000383831 TRMT112Q9UI30 125 aaKnown RBP24.91■■□□□ 1.58
CPNE9-202ENST00000383831 IFIT2P09913 472 aaKnown RBP24.9■■□□□ 1.58
CPNE9-202ENST00000383831 EAF2Q96CJ1 260 aaPredicted RBP24.9■■□□□ 1.58
CPNE9-202ENST00000383831 TAF1LQ8IZX4 1826 aa24.9■■□□□ 1.58
CPNE9-202ENST00000383831 TTC41PQ6P2S7 1318 aa24.9■■□□□ 1.58
CPNE9-202ENST00000383831 RC3H1Q5TC82 1133 aaKnown RBP24.9■■□□□ 1.58
CPNE9-202ENST00000383831 DDRGK1Q96HY6 314 aa24.89■■□□□ 1.57
CPNE9-202ENST00000383831 C22orf23Q9BZE7 217 aa24.89■■□□□ 1.57
CPNE9-202ENST00000383831 CSF1RP07333 972 aa24.88■■□□□ 1.57
CPNE9-202ENST00000383831 FAM196AQ6ZSG2 479 aa24.88■■□□□ 1.57
CPNE9-202ENST00000383831 RBM6P78332 1123 aaKnown RBP24.88■■□□□ 1.57
CPNE9-202ENST00000383831 TFCP2Q12800 502 aa24.88■■□□□ 1.57
CPNE9-202ENST00000383831 SUSD4Q5VX71 490 aa24.88■■□□□ 1.57
CPNE9-202ENST00000383831 TRIM6-TRIM34B2RNG4 842 aa24.87■■□□□ 1.57
CPNE9-202ENST00000383831 IRS4O14654 1257 aaPredicted RBP24.87■■□□□ 1.57
CPNE9-202ENST00000383831 RILPL2Q969X0 211 aa24.87■■□□□ 1.57
CPNE9-202ENST00000383831 ZNF594Q96JF6 807 aaPredicted RBP24.87■■□□□ 1.57
CPNE9-202ENST00000383831 ECHDC1Q9NTX5 307 aa24.87■■□□□ 1.57
CPNE9-202ENST00000383831 MYH3P11055 1940 aa24.86■■□□□ 1.57
CPNE9-202ENST00000383831 RPS6KA4O75676 772 aa24.86■■□□□ 1.57
CPNE9-202ENST00000383831 CASC1Q6TDU7 716 aa24.86■■□□□ 1.57
CPNE9-202ENST00000383831 SMIM5Q71RC9 77 aa24.86■■□□□ 1.57
CPNE9-202ENST00000383831 ATG9AQ7Z3C6 839 aa24.86■■□□□ 1.57
CPNE9-202ENST00000383831 CCDC8Q9H0W5 538 aaPredicted RBP24.86■■□□□ 1.57
CPNE9-202ENST00000383831 TLR7Q9NYK1 1049 aaKnown RBP24.86■■□□□ 1.57
CPNE9-202ENST00000383831 SCN7AQ01118 1682 aa24.86■■□□□ 1.57
CPNE9-202ENST00000383831 CCDC57Q2TAC2 916 aa24.85■■□□□ 1.57
CPNE9-202ENST00000383831 GPATCH3Q96I76 525 aa24.85■■□□□ 1.57
CPNE9-202ENST00000383831 CCDC85AQ96PX6 553 aaPredicted RBP24.85■■□□□ 1.57
CPNE9-202ENST00000383831 ZNF652Q9Y2D9 606 aa24.85■■□□□ 1.57
CPNE9-202ENST00000383831 PARP10Q53GL7 1025 aa24.85■■□□□ 1.57
CPNE9-202ENST00000383831 NIP7Q9Y221 180 aaKnown RBP eCLIP24.85■■□□□ 1.57
CPNE9-202ENST00000383831 ERC2O15083 957 aa24.84■■□□□ 1.57
CPNE9-202ENST00000383831 GNPATO15228 680 aa24.84■■□□□ 1.57
CPNE9-202ENST00000383831 GLRX3O76003 335 aaKnown RBP24.84■■□□□ 1.57
CPNE9-202ENST00000383831 CTSWP56202 376 aa24.84■■□□□ 1.57
CPNE9-202ENST00000383831 TNNI3KQ59H18 835 aa24.84■■□□□ 1.57
CPNE9-202ENST00000383831 TTLL11Q8NHH1 800 aa24.84■■□□□ 1.57
CPNE9-202ENST00000383831 UTP14AQ9BVJ6 771 aaKnown RBP24.84■■□□□ 1.57
CPNE9-202ENST00000383831 FPGT-TNNI3KV9GXZ4 949 aa24.84■■□□□ 1.57
CPNE9-202ENST00000383831 C4BP0C0L5 1744 aa24.84■■□□□ 1.57
CPNE9-202ENST00000383831 EYA2O00167 538 aa24.83■■□□□ 1.57
CPNE9-202ENST00000383831 PDE8AO60658 829 aa24.83■■□□□ 1.57
CPNE9-202ENST00000383831 MAP4K4O95819 1239 aaPredicted RBP24.83■■□□□ 1.57
CPNE9-202ENST00000383831 LRRC24Q50LG9 513 aa24.83■■□□□ 1.57
CPNE9-202ENST00000383831 CLEC4GQ6UXB4 293 aa24.83■■□□□ 1.57
CPNE9-202ENST00000383831 AK9Q5TCS8 1911 aa24.83■■□□□ 1.56
CPNE9-202ENST00000383831 FAM177BA6PVY3 158 aa24.82■■□□□ 1.56
CPNE9-202ENST00000383831 CIAO1O76071 339 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms