RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 CCDC93Q567U6 631 aa22.21■■□□□ 1.15
SMARCD1-201ENST00000381513 SARM1Q6SZW1 724 aa22.21■■□□□ 1.15
SMARCD1-201ENST00000381513 CAVIN2O95810 425 aa22.21■■□□□ 1.15
SMARCD1-201ENST00000381513 ME3Q16798 604 aa22.21■■□□□ 1.15
SMARCD1-201ENST00000381513 VPS18Q9P253 973 aa22.21■■□□□ 1.15
SMARCD1-201ENST00000381513 CYP46A1Q9Y6A2 500 aa22.21■■□□□ 1.15
SMARCD1-201ENST00000381513 ABCA8O94911 1581 aa22.2■■□□□ 1.15
SMARCD1-201ENST00000381513 AOPEPQ8N6M6 819 aa22.2■■□□□ 1.14
SMARCD1-201ENST00000381513 EXOC4Q96A65 974 aa22.2■■□□□ 1.14
SMARCD1-201ENST00000381513 ZSCAN31Q96LW9 406 aaPredicted RBP22.2■■□□□ 1.14
SMARCD1-201ENST00000381513 STX1AQ16623 288 aa22.2■■□□□ 1.14
SMARCD1-201ENST00000381513 CC2D1AQ6P1N0 951 aaPredicted RBP22.2■■□□□ 1.14
SMARCD1-201ENST00000381513 SH2B1Q9NRF2 756 aaPredicted RBP22.2■■□□□ 1.14
SMARCD1-201ENST00000381513 IVLP07476 585 aa22.19■■□□□ 1.14
SMARCD1-201ENST00000381513 MAGEA9P43362 315 aa22.19■■□□□ 1.14
SMARCD1-201ENST00000381513 PRPF40BQ6NWY9 871 aaKnown RBP22.19■■□□□ 1.14
SMARCD1-201ENST00000381513 AFAP1Q8N556 730 aa22.19■■□□□ 1.14
SMARCD1-201ENST00000381513 ERCC4Q92889 916 aaPredicted RBP22.19■■□□□ 1.14
SMARCD1-201ENST00000381513 FMNL2Q96PY5 1086 aa22.19■■□□□ 1.14
SMARCD1-201ENST00000381513 ETF1P62495 437 aaKnown RBP22.19■■□□□ 1.14
SMARCD1-201ENST00000381513 ABCA6Q8N139 1617 aa22.19■■□□□ 1.14
SMARCD1-201ENST00000381513 PDCP20941 246 aa22.19■■□□□ 1.14
SMARCD1-201ENST00000381513 SGSM2O43147 1006 aa22.18■■□□□ 1.14
SMARCD1-201ENST00000381513 TPM1P09493 284 aa22.18■■□□□ 1.14
SMARCD1-201ENST00000381513 ADCK5Q3MIX3 580 aa22.18■■□□□ 1.14
SMARCD1-201ENST00000381513 EIF3CLB5ME19 914 aaKnown RBP22.18■■□□□ 1.14
SMARCD1-201ENST00000381513 EIF3CQ99613 913 aaKnown RBP22.18■■□□□ 1.14
SMARCD1-201ENST00000381513 UGGT1Q9NYU2 1555 aa22.18■■□□□ 1.14
SMARCD1-201ENST00000381513 HAP1P54257 671 aaPredicted RBP22.18■■□□□ 1.14
SMARCD1-201ENST00000381513 MCM6Q14566 821 aa22.18■■□□□ 1.14
SMARCD1-201ENST00000381513 CT47A1Q5JQC4 288 aaPredicted RBP22.18■■□□□ 1.14
SMARCD1-201ENST00000381513 PNMA6EA0A0J9YXQ4 647 aa22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 ATP8B1O43520 1251 aa22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 STK3Q13188 491 aa22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 AXDND1Q5T1B0 1012 aaPredicted RBP22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 FOXR1Q6PIV2 292 aa22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 PGBD1Q96JS3 809 aa22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 TCEANC2Q96MN5 208 aa22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 C14orf93Q9H972 538 aaKnown RBP22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 TADA3O75528 432 aa22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 ATP2B1P20020 1258 aa22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 ZRSR1Q15695 479 aaKnown RBP22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 CCDC158Q5M9N0 1113 aa22.17■■□□□ 1.14
SMARCD1-201ENST00000381513 GNAI3P08754 354 aa22.16■■□□□ 1.14
SMARCD1-201ENST00000381513 RBM43Q6ZSC3 357 aaKnown RBP22.16■■□□□ 1.14
SMARCD1-201ENST00000381513 PLEKHG2Q9H7P9 1386 aa22.16■■□□□ 1.14
SMARCD1-201ENST00000381513 COL3A1P02461 1466 aaPredicted RBP22.16■■□□□ 1.14
SMARCD1-201ENST00000381513 EFCAB8A8MWE9 144 aa22.16■■□□□ 1.14
SMARCD1-201ENST00000381513 CEP57L1Q8IYX8 460 aa22.16■■□□□ 1.14
SMARCD1-201ENST00000381513 LARP1Q6PKG0 1096 aaKnown RBP22.15■■□□□ 1.14
SMARCD1-201ENST00000381513 LSG1Q9H089 658 aaKnown RBP22.15■■□□□ 1.14
SMARCD1-201ENST00000381513 CDC42BPBQ9Y5S2 1711 aa22.15■■□□□ 1.14
SMARCD1-201ENST00000381513 MAP3K4Q9Y6R4 1608 aa22.14■■□□□ 1.14
SMARCD1-201ENST00000381513 SALL3Q9BXA9 1300 aa22.14■■□□□ 1.14
SMARCD1-201ENST00000381513 PSDA5PKW4 1024 aaPredicted RBP22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 VPS53Q5VIR6 699 aa22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 PPM1EQ8WY54 764 aa22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 SRRTQ9BXP5 876 aaKnown RBP22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 ZSWIM4Q9H7M6 989 aa22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 TTC21AQ8NDW8 1320 aa22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 LRRFIP1Q32MZ4 808 aaKnown RBP22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 EFCAB2Q5VUJ9 269 aa22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 HDGFL2Q7Z4V5 671 aaPredicted RBP22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 DDX11Q96FC9 970 aa22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 ANO10Q9NW15 660 aa22.14■■□□□ 1.13
SMARCD1-201ENST00000381513 H3BQF6 201 aa22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 IFIT2P09913 472 aaKnown RBP22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 CCDC91Q7Z6B0 441 aa22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 CCDC150Q8NCX0 1101 aa22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 IL17RAQ96F46 866 aa22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 IFNKQ9P0W0 207 aa22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 MINK1Q8N4C8 1332 aaPredicted RBP22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 LRRC7Q96NW7 1537 aa22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 FOSBP53539 338 aa22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 ST3GAL1Q11201 340 aa22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 UBXN6Q9BZV1 441 aa22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 TPCN1Q9ULQ1 816 aa22.13■■□□□ 1.13
SMARCD1-201ENST00000381513 KINO60870 393 aaKnown RBP22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 ARMCX5Q6P1M9 558 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 PLEKHA4Q9H4M7 779 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 CEP83Q9Y592 693 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 RAB11FIP3O75154 756 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 CCDC172P0C7W6 258 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 TTLL5Q6EMB2 1281 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 CCDC73Q6ZRK6 1079 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 G2E3Q7L622 706 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 TTC21BQ7Z4L5 1316 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 H3BQV1 296 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 ZKSCAN1P17029 563 aaPredicted RBP22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 IFFO2Q5TF58 517 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 CNTROBQ8N137 903 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 PARD6BQ9BYG5 372 aa22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 XPO4Q9C0E2 1151 aaKnown RBP22.12■■□□□ 1.13
SMARCD1-201ENST00000381513 PDE11AQ9HCR9 933 aa22.11■■□□□ 1.13
SMARCD1-201ENST00000381513 EMILIN1Q9Y6C2 1016 aa22.11■■□□□ 1.13
SMARCD1-201ENST00000381513 PHACTR2O75167 634 aa22.11■■□□□ 1.13
SMARCD1-201ENST00000381513 DHX40Q8IX18 779 aaKnown RBP22.11■■□□□ 1.13
SMARCD1-201ENST00000381513 STAP2Q9UGK3 403 aa22.11■■□□□ 1.13
SMARCD1-201ENST00000381513 CCT4P50991 539 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms