RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 FLAD1Q8NFF5 587 aa25.57■■□□□ 1.68
TSSC4-203ENST00000380996 USP42Q9H9J4 1324 aaKnown RBP25.56■■□□□ 1.68
TSSC4-203ENST00000380996 UBE3BQ7Z3V4 1068 aa25.56■■□□□ 1.68
TSSC4-203ENST00000380996 HMMRO75330 724 aa25.55■■□□□ 1.68
TSSC4-203ENST00000380996 ZNF827Q17R98 1081 aa25.55■■□□□ 1.68
TSSC4-203ENST00000380996 SRP68Q9UHB9 627 aaKnown RBP25.55■■□□□ 1.68
TSSC4-203ENST00000380996 NIP7Q9Y221 180 aaKnown RBP eCLIP25.55■■□□□ 1.68
TSSC4-203ENST00000380996 IGHDP01880 384 aa25.54■■□□□ 1.68
TSSC4-203ENST00000380996 DEFB132Q7Z7B7 95 aa25.54■■□□□ 1.68
TSSC4-203ENST00000380996 ZBTB38Q8NAP3 1195 aaPredicted RBP25.54■■□□□ 1.68
TSSC4-203ENST00000380996 PCCAP05165 728 aaPredicted RBP25.53■■□□□ 1.68
TSSC4-203ENST00000380996 KDM2BQ8NHM5 1336 aa25.53■■□□□ 1.68
TSSC4-203ENST00000380996 ATP8B2P98198 1209 aa25.53■■□□□ 1.68
TSSC4-203ENST00000380996 PPP1R42Q7Z4L9 355 aa25.53■■□□□ 1.68
TSSC4-203ENST00000380996 SUCLG2Q96I99 432 aa25.53■■□□□ 1.68
TSSC4-203ENST00000380996 BCL2L12Q9HB09 334 aa25.53■■□□□ 1.68
TSSC4-203ENST00000380996 STK32BQ9NY57 414 aa25.53■■□□□ 1.68
TSSC4-203ENST00000380996 UBN2Q6ZU65 1347 aa25.52■■□□□ 1.68
TSSC4-203ENST00000380996 CASP7P55210 303 aa25.52■■□□□ 1.68
TSSC4-203ENST00000380996 SIRT2Q8IXJ6 389 aa25.52■■□□□ 1.68
TSSC4-203ENST00000380996 TRMT112Q9UI30 125 aaKnown RBP25.52■■□□□ 1.68
TSSC4-203ENST00000380996 NUP98P52948 1817 aa25.51■■□□□ 1.67
TSSC4-203ENST00000380996 UTP14AQ9BVJ6 771 aaKnown RBP25.51■■□□□ 1.67
TSSC4-203ENST00000380996 AFDNP55196 1824 aaKnown RBP25.51■■□□□ 1.67
TSSC4-203ENST00000380996 UBR3Q6ZT12 1888 aa25.5■■□□□ 1.67
TSSC4-203ENST00000380996 SETDB2Q96T68 719 aa25.5■■□□□ 1.67
TSSC4-203ENST00000380996 BCORQ6W2J9 1755 aa25.5■■□□□ 1.67
TSSC4-203ENST00000380996 MTX1Q13505 466 aa25.49■■□□□ 1.67
TSSC4-203ENST00000380996 SLC15A2Q16348 729 aa25.49■■□□□ 1.67
TSSC4-203ENST00000380996 JARID2Q92833 1246 aaPredicted RBP25.49■■□□□ 1.67
TSSC4-203ENST00000380996 SCN7AQ01118 1682 aa25.49■■□□□ 1.67
TSSC4-203ENST00000380996 RTL5Q5HYW3 569 aaPredicted RBP25.48■■□□□ 1.67
TSSC4-203ENST00000380996 SUSD4Q5VX71 490 aa25.48■■□□□ 1.67
TSSC4-203ENST00000380996 TBC1D9BQ66K14 1250 aa25.48■■□□□ 1.67
TSSC4-203ENST00000380996 FAM89AQ96GI7 184 aa25.48■■□□□ 1.67
TSSC4-203ENST00000380996 KAZALD1Q96I82 304 aa25.48■■□□□ 1.67
TSSC4-203ENST00000380996 BICC1Q9H694 974 aaKnown RBP25.48■■□□□ 1.67
TSSC4-203ENST00000380996 ANKRD36CQ5JPF3 1778 aa25.48■■□□□ 1.67
TSSC4-203ENST00000380996 CDHR2Q9BYE9 1310 aa25.48■■□□□ 1.67
TSSC4-203ENST00000380996 HSP90B1P14625 803 aaKnown RBP25.47■■□□□ 1.67
TSSC4-203ENST00000380996 MSH5O43196 834 aa25.47■■□□□ 1.67
TSSC4-203ENST00000380996 SRGAP3O43295 1099 aa25.47■■□□□ 1.67
TSSC4-203ENST00000380996 BICDL1Q6ZP65 573 aa25.47■■□□□ 1.67
TSSC4-203ENST00000380996 GCC1Q96CN9 775 aa25.47■■□□□ 1.67
TSSC4-203ENST00000380996 SH3TC1Q8TE82 1336 aa25.46■■□□□ 1.67
TSSC4-203ENST00000380996 GYS1P13807 737 aa25.46■■□□□ 1.67
TSSC4-203ENST00000380996 SSH3Q8TE77 659 aa25.46■■□□□ 1.67
TSSC4-203ENST00000380996 NYXQ9GZU5 481 aa25.46■■□□□ 1.67
TSSC4-203ENST00000380996 PNMA6EA0A0J9YXQ4 647 aa25.45■■□□□ 1.66
TSSC4-203ENST00000380996 RABL6Q3YEC7 729 aaPredicted RBP25.45■■□□□ 1.66
TSSC4-203ENST00000380996 COL23A1Q86Y22 540 aaPredicted RBP25.45■■□□□ 1.66
TSSC4-203ENST00000380996 PLA2G12BQ9BX93 195 aa25.45■■□□□ 1.66
TSSC4-203ENST00000380996 ANO8Q9HCE9 1232 aaPredicted RBP25.45■■□□□ 1.66
TSSC4-203ENST00000380996 FAM177BA6PVY3 158 aa25.44■■□□□ 1.66
TSSC4-203ENST00000380996 IRS4O14654 1257 aaPredicted RBP25.44■■□□□ 1.66
TSSC4-203ENST00000380996 C4AP0C0L4 1744 aa25.44■■□□□ 1.66
TSSC4-203ENST00000380996 SMC5Q8IY18 1101 aa25.44■■□□□ 1.66
TSSC4-203ENST00000380996 PNPLA7Q6ZV29 1317 aa25.44■■□□□ 1.66
TSSC4-203ENST00000380996 NTSR2O95665 410 aa25.43■■□□□ 1.66
TSSC4-203ENST00000380996 POLA2Q14181 598 aa25.43■■□□□ 1.66
TSSC4-203ENST00000380996 EPHA10Q5JZY3 1008 aa25.43■■□□□ 1.66
TSSC4-203ENST00000380996 DCTPP1Q9H773 170 aa25.43■■□□□ 1.66
TSSC4-203ENST00000380996 FOXO4P98177 505 aa25.42■■□□□ 1.66
TSSC4-203ENST00000380996 NLGN1Q8N2Q7 840 aa25.42■■□□□ 1.66
TSSC4-203ENST00000380996 GTF2E1P29083 439 aaPredicted RBP25.42■■□□□ 1.66
TSSC4-203ENST00000380996 NFIXQ14938 502 aa25.42■■□□□ 1.66
TSSC4-203ENST00000380996 LMBR1LQ6UX01 489 aa25.42■■□□□ 1.66
TSSC4-203ENST00000380996 TPTE2Q6XPS3 522 aa25.42■■□□□ 1.66
TSSC4-203ENST00000380996 NBPF5PQ86XG9 351 aaPredicted RBP25.42■■□□□ 1.66
TSSC4-203ENST00000380996 CARMIL3Q8ND23 1372 aa25.41■■□□□ 1.66
TSSC4-203ENST00000380996 PDE8AO60658 829 aa25.41■■□□□ 1.66
TSSC4-203ENST00000380996 SYNE4Q8N205 404 aa25.4■■□□□ 1.66
TSSC4-203ENST00000380996 CHMP3Q9Y3E7 222 aa25.38■■□□□ 1.65
TSSC4-203ENST00000380996 NPHP1O15259 732 aa25.37■■□□□ 1.65
TSSC4-203ENST00000380996 TM4SF1P30408 202 aa25.37■■□□□ 1.65
TSSC4-203ENST00000380996 HSP90AB4PQ58FF6 505 aa25.37■■□□□ 1.65
TSSC4-203ENST00000380996 NUTM1Q86Y26 1132 aa25.37■■□□□ 1.65
TSSC4-203ENST00000380996 CSF1RP07333 972 aa25.37■■□□□ 1.65
TSSC4-203ENST00000380996 CTSWP56202 376 aa25.37■■□□□ 1.65
TSSC4-203ENST00000380996 ZBTB47Q9UFB7 747 aaPredicted RBP25.37■■□□□ 1.65
TSSC4-203ENST00000380996 SURF6O75683 361 aaKnown RBP25.36■■□□□ 1.65
TSSC4-203ENST00000380996 HCLS1P14317 486 aaPredicted RBP25.36■■□□□ 1.65
TSSC4-203ENST00000380996 ERFEQ4G0M1 354 aa25.36■■□□□ 1.65
TSSC4-203ENST00000380996 SLC10A5Q5PT55 438 aa25.35■■□□□ 1.65
TSSC4-203ENST00000380996 RAB11FIP3O75154 756 aa25.34■■□□□ 1.65
TSSC4-203ENST00000380996 CCDC57Q2TAC2 916 aa25.34■■□□□ 1.65
TSSC4-203ENST00000380996 ANKRD45Q5TZF3 282 aa25.34■■□□□ 1.65
TSSC4-203ENST00000380996 CNBD1Q8NA66 436 aa25.34■■□□□ 1.65
TSSC4-203ENST00000380996 TTLL11Q8NHH1 800 aa25.34■■□□□ 1.65
TSSC4-203ENST00000380996 PDZRN3Q9UPQ7 1066 aa25.34■■□□□ 1.65
TSSC4-203ENST00000380996 NOP58Q9Y2X3 529 aaKnown RBP25.34■■□□□ 1.65
TSSC4-203ENST00000380996 NUCB1Q02818 461 aa25.33■■□□□ 1.65
TSSC4-203ENST00000380996 EXOC6BQ9Y2D4 811 aa25.33■■□□□ 1.65
TSSC4-203ENST00000380996 TUBGCP6Q96RT7 1819 aa25.33■■□□□ 1.65
TSSC4-203ENST00000380996 SERPINB2P05120 415 aa25.32■■□□□ 1.64
TSSC4-203ENST00000380996 COPRSQ9NQ92 184 aa25.32■■□□□ 1.64
TSSC4-203ENST00000380996 COL24A1Q17RW2 1714 aa25.32■■□□□ 1.64
TSSC4-203ENST00000380996 RFX5P48382 616 aaPredicted RBP25.32■■□□□ 1.64
TSSC4-203ENST00000380996 G3BP1Q13283 466 aaKnown RBP eCLIP25.32■■□□□ 1.64
TSSC4-203ENST00000380996 IFIT5Q13325 482 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms