RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 HOOK3Q86VS8 718 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 GPHNQ9NQX3 736 aaPredicted RBP10.67□□□□□ -0.7
FREM1-201ENST00000380875 ZBTB21Q9ULJ3 1066 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 GSTTP1A0A1W2PQM5 241 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 UQCRFS1P1P0C7P4 283 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 CCDC40Q4G0X9 1142 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 OTUD6BQ8N6M0 293 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 LRRC45Q96CN5 670 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 CCNL1Q9UK58 526 aaPredicted RBP10.67□□□□□ -0.7
FREM1-201ENST00000380875 RPAP2Q8IXW5 612 aaPredicted RBP10.67□□□□□ -0.7
FREM1-201ENST00000380875 CCDC113Q9H0I3 377 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 HAND2P61296 217 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 PPP4R3BQ5MIZ7 849 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 RAB11FIP4Q86YS3 637 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 TCP11L1Q9NUJ3 509 aa10.67□□□□□ -0.7
FREM1-201ENST00000380875 IDEP14735 1019 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 JAG2Q9Y219 1238 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 CCT2P78371 535 aaKnown RBP10.66□□□□□ -0.7
FREM1-201ENST00000380875 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.66□□□□□ -0.7
FREM1-201ENST00000380875 HEATR3Q7Z4Q2 680 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 SLC4A4Q9Y6R1 1079 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 TTC21BQ7Z4L5 1316 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 TMEM57Q8N5G2 664 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 FANCAO15360 1455 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 DNMBPQ6XZF7 1577 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 STAMBPO95630 424 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 ARL1P40616 181 aaPredicted RBP10.66□□□□□ -0.7
FREM1-201ENST00000380875 AMPD3Q01432 767 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 IDI1Q13907 227 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 KIF22Q14807 665 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 ERMNQ8TAM6 284 aa10.66□□□□□ -0.7
FREM1-201ENST00000380875 CAMK4Q16566 473 aa10.65□□□□□ -0.7
FREM1-201ENST00000380875 TDRD12Q587J7 1177 aaKnown RBP10.65□□□□□ -0.7
FREM1-201ENST00000380875 NAA16Q6N069 864 aaPredicted RBP10.65□□□□□ -0.7
FREM1-201ENST00000380875 GIGYF2Q6Y7W6 1299 aaKnown RBP10.65□□□□□ -0.7
FREM1-201ENST00000380875 TCHPQ9BT92 498 aa10.65□□□□□ -0.7
FREM1-201ENST00000380875 USP21Q9UK80 565 aa10.65□□□□□ -0.7
FREM1-201ENST00000380875 TSNARE1Q96NA8 513 aa10.65□□□□□ -0.7
FREM1-201ENST00000380875 SLC39A6Q13433 755 aa10.65□□□□□ -0.7
FREM1-201ENST00000380875 HSP90AA2PQ14568 343 aaPredicted RBP10.65□□□□□ -0.7
FREM1-201ENST00000380875 FAM98CQ17RN3 349 aaKnown RBP10.65□□□□□ -0.7
FREM1-201ENST00000380875 ZNF526Q8TF50 670 aaPredicted RBP10.65□□□□□ -0.7
FREM1-201ENST00000380875 NUP62CLQ9H1M0 184 aa10.65□□□□□ -0.7
FREM1-201ENST00000380875 IVNS1ABPQ9Y6Y0 642 aa10.65□□□□□ -0.7
FREM1-201ENST00000380875 STX6O43752 255 aa10.65□□□□□ -0.7
FREM1-201ENST00000380875 HMGB1P09429 215 aaKnown RBP10.65□□□□□ -0.7
FREM1-201ENST00000380875 DNAJC5BQ9UF47 199 aa10.65□□□□□ -0.7
FREM1-201ENST00000380875 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.71
FREM1-201ENST00000380875 TRAF1Q13077 416 aa10.65□□□□□ -0.71
FREM1-201ENST00000380875 PDE3AQ14432 1141 aa10.65□□□□□ -0.71
FREM1-201ENST00000380875 CCDC87Q9NVE4 849 aa10.65□□□□□ -0.71
FREM1-201ENST00000380875 CIZ1Q9ULV3 898 aaPredicted RBP10.65□□□□□ -0.71
FREM1-201ENST00000380875 IQGAP2Q13576 1575 aa10.65□□□□□ -0.71
FREM1-201ENST00000380875 H0YIN7 160 aa10.64□□□□□ -0.71
FREM1-201ENST00000380875 CFAP100Q494V2 611 aa10.64□□□□□ -0.71
FREM1-201ENST00000380875 IL27Q8NEV9 243 aa10.64□□□□□ -0.71
FREM1-201ENST00000380875 CCDC148Q8NFR7 591 aa10.64□□□□□ -0.71
FREM1-201ENST00000380875 K7ELQ4 463 aaPredicted RBP10.64□□□□□ -0.71
FREM1-201ENST00000380875 ATP2B3Q16720 1220 aa10.64□□□□□ -0.71
FREM1-201ENST00000380875 IFIT1BQ5T764 474 aaKnown RBP10.64□□□□□ -0.71
FREM1-201ENST00000380875 BIRC2Q13490 618 aa10.64□□□□□ -0.71
FREM1-201ENST00000380875 CNBD1Q8NA66 436 aa10.64□□□□□ -0.71
FREM1-201ENST00000380875 SLC26A6Q9BXS9 759 aa10.64□□□□□ -0.71
FREM1-201ENST00000380875 BRDTQ58F21 947 aaPredicted RBP10.64□□□□□ -0.71
FREM1-201ENST00000380875 MTIF2P46199 727 aaKnown RBP10.64□□□□□ -0.71
FREM1-201ENST00000380875 ARHGAP27Q6ZUM4 889 aa10.64□□□□□ -0.71
FREM1-201ENST00000380875 BCS1LQ9Y276 419 aa10.64□□□□□ -0.71
FREM1-201ENST00000380875 NOS1P29475 1434 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 ANKRD13DQ6ZTN6 518 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 LARGE2Q8N3Y3 721 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 MICU3Q86XE3 530 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 CAMSAP2Q08AD1 1489 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 MAGEB6P1A0A0J9YX57 407 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 RAB3GAP1Q15042 981 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 AKNAD1Q5T1N1 836 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 FERMT3Q86UX7 667 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 DYDC1Q8WWB3 177 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 ARHGAP29Q52LW3 1261 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 TSHZ2Q9NRE2 1034 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 KIAA0586Q9BVV6 1533 aa10.63□□□□□ -0.71
FREM1-201ENST00000380875 ANXA1P04083 346 aa10.62□□□□□ -0.71
FREM1-201ENST00000380875 METAP2P50579 478 aaKnown RBP eCLIP10.62□□□□□ -0.71
FREM1-201ENST00000380875 MSL1Q68DK7 614 aa10.62□□□□□ -0.71
FREM1-201ENST00000380875 GOLGA6L7A0A1B0GV03 622 aa10.62□□□□□ -0.71
FREM1-201ENST00000380875 MPNDQ8N594 471 aa10.62□□□□□ -0.71
FREM1-201ENST00000380875 BACH1O14867 736 aa10.62□□□□□ -0.71
FREM1-201ENST00000380875 PROCA1Q8NCQ7 364 aaPredicted RBP10.62□□□□□ -0.71
FREM1-201ENST00000380875 NUP88Q99567 741 aaPredicted RBP10.62□□□□□ -0.71
FREM1-201ENST00000380875 PKD2L1Q9P0L9 805 aa10.62□□□□□ -0.71
FREM1-201ENST00000380875 SPDYE3A6NKU9 549 aa10.62□□□□□ -0.71
FREM1-201ENST00000380875 UFL1O94874 794 aa10.62□□□□□ -0.71
FREM1-201ENST00000380875 UQCRHP07919 91 aa10.62□□□□□ -0.71
FREM1-201ENST00000380875 FLIIQ13045 1269 aa10.62□□□□□ -0.71
FREM1-201ENST00000380875 XAGE3Q8WTP9 111 aa10.61□□□□□ -0.71
FREM1-201ENST00000380875 ANKRD2Q9GZV1 360 aa10.61□□□□□ -0.71
FREM1-201ENST00000380875 ADGRF5Q8IZF2 1346 aa10.61□□□□□ -0.71
FREM1-201ENST00000380875 IARSP41252 1262 aaKnown RBP10.61□□□□□ -0.71
FREM1-201ENST00000380875 WTAPQ15007 396 aa10.61□□□□□ -0.71
FREM1-201ENST00000380875 CNNM3Q8NE01 707 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms