RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 C1orf141Q5JVX7 400 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 CCDC129Q6ZRS4 1044 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 CDC37L1Q7L3B6 337 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 ECHDC1Q9NTX5 307 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 SPTLC3Q9NUV7 552 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 RPAP1Q9BWH6 1393 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 GLRX3O76003 335 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 RIC3Q7Z5B4 369 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 LUZP1Q86V48 1076 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 ARHGEF10O15013 1369 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 NCBP1Q09161 790 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 ZBTB9Q96C00 473 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 EAF2Q96CJ1 260 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 HYPKQ9NX55 129 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 TPCN1Q9ULQ1 816 aa14.79□□□□□ -0.04
PRPF40B-202ENST00000380281 ATP5J2-PTCD1G3V325 749 aa14.78□□□□□ -0.04
PRPF40B-202ENST00000380281 AP5Z1O43299 807 aa14.78□□□□□ -0.04
PRPF40B-202ENST00000380281 PTCD1O75127 700 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-202ENST00000380281 FEZ1Q99689 392 aa14.78□□□□□ -0.04
PRPF40B-202ENST00000380281 BICC1Q9H694 974 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-202ENST00000380281 ZNF330Q9Y3S2 320 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-202ENST00000380281 PTPRUQ92729 1446 aa14.78□□□□□ -0.04
PRPF40B-202ENST00000380281 LIG1P18858 919 aa14.78□□□□□ -0.04
PRPF40B-202ENST00000380281 ERCC4Q92889 916 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-202ENST00000380281 SEC62Q99442 399 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-202ENST00000380281 A0A0D9SFI3 127 aa14.77□□□□□ -0.04
PRPF40B-202ENST00000380281 SUCLG2Q96I99 432 aa14.77□□□□□ -0.04
PRPF40B-202ENST00000380281 UBE2HP62256 183 aa14.77□□□□□ -0.05
PRPF40B-202ENST00000380281 GUCY1B3Q02153 619 aa14.77□□□□□ -0.05
PRPF40B-202ENST00000380281 MTMR6Q9Y217 621 aa14.77□□□□□ -0.05
PRPF40B-202ENST00000380281 BICD2Q8TD16 824 aa14.77□□□□□ -0.05
PRPF40B-202ENST00000380281 RUFY2Q8WXA3 655 aa14.77□□□□□ -0.05
PRPF40B-202ENST00000380281 TTC14Q96N46 770 aa14.77□□□□□ -0.05
PRPF40B-202ENST00000380281 KCNF1Q9H3M0 494 aa14.77□□□□□ -0.05
PRPF40B-202ENST00000380281 CTNNA3Q9UI47 895 aa14.77□□□□□ -0.05
PRPF40B-202ENST00000380281 PHF8Q9UPP1 1060 aa14.77□□□□□ -0.05
PRPF40B-202ENST00000380281 ADAMTS13Q76LX8 1427 aa14.76□□□□□ -0.05
PRPF40B-202ENST00000380281 JAK2O60674 1132 aa14.76□□□□□ -0.05
PRPF40B-202ENST00000380281 CREB3L3Q68CJ9 461 aa14.76□□□□□ -0.05
PRPF40B-202ENST00000380281 TTC21AQ8NDW8 1320 aa14.76□□□□□ -0.05
PRPF40B-202ENST00000380281 TTC6Q86TZ1 520 aa14.76□□□□□ -0.05
PRPF40B-202ENST00000380281 PEAK1Q9H792 1746 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 LARP1Q6PKG0 1096 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 CHST3Q7LGC8 479 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 ZNF589Q86UQ0 364 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 KIAA1524Q8TCG1 905 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 GPATCH3Q96I76 525 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 ORAI2Q96SN7 254 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 RAB11FIP4Q86YS3 637 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 ZNF592Q92610 1267 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 TIGD1Q96MW7 591 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 CCDC85AQ96PX6 553 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 TRIM34Q9BYJ4 488 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 DACT1Q9NYF0 836 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 CTIFO43310 598 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 CAPN2P17655 700 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 LRMPQ12912 555 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 POLA2Q14181 598 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 BLOC1S2Q6QNY1 142 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 NEUROD6Q96NK8 337 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
PRPF40B-202ENST00000380281 SASH1O94885 1247 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 GABPB1Q06547 395 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 ST3GAL1Q11201 340 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 DDX46Q7L014 1031 aaKnown RBP14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 ZFP91Q96JP5 570 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 MYD88Q99836 296 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 DBF4Q9UBU7 674 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 NRBP1Q9UHY1 535 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 PTGS1P23219 599 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 TERF2Q15554 542 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 DDX17Q92841 729 aaKnown RBP14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 C16orf45Q96MC5 204 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 FTOQ9C0B1 505 aaKnown RBP eCLIP14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 NLRP2Q9NX02 1062 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 ATP6V1DQ9Y5K8 247 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 RIMBP3CA6NJZ7 1639 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 RIMBP3BA6NNM3 1639 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 RIMBP3Q9UFD9 1639 aa14.74□□□□□ -0.05
PRPF40B-202ENST00000380281 ST7Q9NRC1 585 aa14.73□□□□□ -0.05
PRPF40B-202ENST00000380281 CCDC66A2RUB6 948 aa14.73□□□□□ -0.05
PRPF40B-202ENST00000380281 HSP90AB4PQ58FF6 505 aa14.73□□□□□ -0.05
PRPF40B-202ENST00000380281 TRIM5Q9C035 493 aa14.73□□□□□ -0.05
PRPF40B-202ENST00000380281 USP31Q70CQ4 1352 aa14.73□□□□□ -0.05
PRPF40B-202ENST00000380281 CCDC171Q6TFL3 1326 aa14.73□□□□□ -0.05
PRPF40B-202ENST00000380281 EPHA10Q5JZY3 1008 aa14.73□□□□□ -0.05
PRPF40B-202ENST00000380281 SIRT1Q96EB6 747 aa14.73□□□□□ -0.05
PRPF40B-202ENST00000380281 DDX41Q9UJV9 622 aaKnown RBP14.73□□□□□ -0.05
PRPF40B-202ENST00000380281 CCT2P78371 535 aaKnown RBP14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 SPATA32Q96LK8 384 aa14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 KDRP35968 1356 aa14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 H3BQV1 296 aa14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 SLC27A2O14975 620 aa14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 PLEKHO1Q53GL0 409 aaPredicted RBP14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 IFFO2Q5TF58 517 aa14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 COPS6Q7L5N1 327 aa14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 TNMDQ9H2S6 317 aa14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 V9GYY5 206 aaPredicted RBP14.72□□□□□ -0.05
PRPF40B-202ENST00000380281 ADCY9O60503 1353 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms