RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 TRIM27P14373 513 aa12.76□□□□□ -0.37
ITSN1-201ENST00000379960 OAS2P29728 719 aaKnown RBP12.76□□□□□ -0.37
ITSN1-201ENST00000379960 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
ITSN1-201ENST00000379960 PLCD4Q9BRC7 762 aa12.76□□□□□ -0.37
ITSN1-201ENST00000379960 RAI14Q9P0K7 980 aa12.76□□□□□ -0.37
ITSN1-201ENST00000379960 ANKRD65E5RJM6 399 aa12.76□□□□□ -0.37
ITSN1-201ENST00000379960 PTPN14Q15678 1187 aa12.76□□□□□ -0.37
ITSN1-201ENST00000379960 ADGRL3Q9HAR2 1447 aa12.76□□□□□ -0.37
ITSN1-201ENST00000379960 NRKQ7Z2Y5 1582 aa12.76□□□□□ -0.37
ITSN1-201ENST00000379960 BIRC2Q13490 618 aa12.75□□□□□ -0.37
ITSN1-201ENST00000379960 LTV1Q96GA3 475 aaPredicted RBP12.75□□□□□ -0.37
ITSN1-201ENST00000379960 EIF3CLB5ME19 914 aaKnown RBP12.75□□□□□ -0.37
ITSN1-201ENST00000379960 NOL8Q76FK4 1167 aaKnown RBP12.75□□□□□ -0.37
ITSN1-201ENST00000379960 RPAINQ86UA6 219 aa12.75□□□□□ -0.37
ITSN1-201ENST00000379960 LRRN4CLQ8ND94 238 aa12.75□□□□□ -0.37
ITSN1-201ENST00000379960 EIF3CQ99613 913 aaKnown RBP12.75□□□□□ -0.37
ITSN1-201ENST00000379960 STRCP1A6NGW2 1772 aa12.75□□□□□ -0.37
ITSN1-201ENST00000379960 RNF20Q5VTR2 975 aa12.75□□□□□ -0.37
ITSN1-201ENST00000379960 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
ITSN1-201ENST00000379960 PHACTR3Q96KR7 559 aa12.75□□□□□ -0.37
ITSN1-201ENST00000379960 CALR3Q96L12 384 aaKnown RBP12.75□□□□□ -0.37
ITSN1-201ENST00000379960 AK7Q96M32 723 aa12.75□□□□□ -0.37
ITSN1-201ENST00000379960 TMEM94Q12767 1356 aa12.75□□□□□ -0.37
ITSN1-201ENST00000379960 ARHGAP29Q52LW3 1261 aa12.74□□□□□ -0.37
ITSN1-201ENST00000379960 SWT1Q5T5J6 900 aaKnown RBP12.74□□□□□ -0.37
ITSN1-201ENST00000379960 TMCO3Q6UWJ1 677 aa12.74□□□□□ -0.37
ITSN1-201ENST00000379960 ZNF526Q8TF50 670 aaPredicted RBP12.74□□□□□ -0.37
ITSN1-201ENST00000379960 SEC31AO94979 1220 aaKnown RBP12.74□□□□□ -0.37
ITSN1-201ENST00000379960 SUGP1Q8IWZ8 645 aaKnown RBP12.74□□□□□ -0.37
ITSN1-201ENST00000379960 REXO1L1PQ8IX06 675 aa12.74□□□□□ -0.37
ITSN1-201ENST00000379960 CACTINQ8WUQ7 758 aaKnown RBP12.74□□□□□ -0.37
ITSN1-201ENST00000379960 TRMT1Q9NXH9 659 aaKnown RBP12.74□□□□□ -0.37
ITSN1-201ENST00000379960 MAP3K19Q56UN5 1328 aa12.74□□□□□ -0.37
ITSN1-201ENST00000379960 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
ITSN1-201ENST00000379960 FUCA2Q9BTY2 467 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 IL13P35225 146 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 AMPHP49418 695 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 CCDC34Q96HJ3 373 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 TMX3Q96JJ7 454 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 OVOS2A0A0J9YW53 1432 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 OVOS2Q6IE36 1432 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 ZNF335Q9H4Z2 1342 aaPredicted RBP12.73□□□□□ -0.37
ITSN1-201ENST00000379960 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
ITSN1-201ENST00000379960 ZRANB2O95218 330 aaKnown RBP eCLIP12.72□□□□□ -0.37
ITSN1-201ENST00000379960 ACTN2P35609 894 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
ITSN1-201ENST00000379960 FOXR1Q6PIV2 292 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 MMS22LQ6ZRQ5 1243 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 TSR2Q969E8 191 aaKnown RBP12.72□□□□□ -0.37
ITSN1-201ENST00000379960 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 PIK3C2AO00443 1686 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 ATF3P18847 181 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 EIF4A2Q14240 407 aaKnown RBP12.72□□□□□ -0.37
ITSN1-201ENST00000379960 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
ITSN1-201ENST00000379960 SSH2Q76I76 1423 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 ANKARQ7Z5J8 1434 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 PPP1R12AO14974 1030 aaPredicted RBP12.72□□□□□ -0.37
ITSN1-201ENST00000379960 LUZP1Q86V48 1076 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 PDRG1Q9NUG6 133 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
ITSN1-201ENST00000379960 GSPT1P15170 499 aaKnown RBP12.71□□□□□ -0.37
ITSN1-201ENST00000379960 SULT6B1Q6IMI4 303 aa12.71□□□□□ -0.37
ITSN1-201ENST00000379960 LEKR1Q6ZMV7 388 aa12.71□□□□□ -0.37
ITSN1-201ENST00000379960 TRIM5Q9C035 493 aa12.71□□□□□ -0.37
ITSN1-201ENST00000379960 C19orf44Q9H6X5 657 aa12.71□□□□□ -0.37
ITSN1-201ENST00000379960 CCDC171Q6TFL3 1326 aa12.71□□□□□ -0.37
ITSN1-201ENST00000379960 TTC21AQ8NDW8 1320 aa12.71□□□□□ -0.37
ITSN1-201ENST00000379960 LRRC7Q96NW7 1537 aa12.71□□□□□ -0.37
ITSN1-201ENST00000379960 CFAP44Q96MT7 982 aa12.71□□□□□ -0.38
ITSN1-201ENST00000379960 IQSEC2Q5JU85 1478 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 SMC1AQ14683 1233 aaKnown RBP12.7□□□□□ -0.38
ITSN1-201ENST00000379960 NYAP1Q6ZVC0 841 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 ARGLU1Q9NWB6 273 aaPredicted RBP12.7□□□□□ -0.38
ITSN1-201ENST00000379960 CASTP20810 708 aaKnown RBP12.7□□□□□ -0.38
ITSN1-201ENST00000379960 SCP2P22307 547 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 CEP89Q96ST8 783 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 ADAM21Q9UKJ8 722 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 ZBTB12Q9Y330 459 aaPredicted RBP12.7□□□□□ -0.38
ITSN1-201ENST00000379960 PEAK1Q9H792 1746 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 NEK4P51957 841 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 CCDC144BQ3MJ40 725 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 CCDC144CPQ8IYA2 1237 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 IQUBQ8NA54 791 aa12.7□□□□□ -0.38
ITSN1-201ENST00000379960 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 FAM83GA6ND36 823 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 SASH3O75995 380 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 IVLP07476 585 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 DCTN1Q14203 1278 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 ARID5BQ14865 1188 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 MAP9Q49MG5 647 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 TRIM35Q9UPQ4 493 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 STRCQ7RTU9 1775 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 CCDC192P0DO97 292 aa12.69□□□□□ -0.38
ITSN1-201ENST00000379960 OS9Q13438 667 aaPredicted RBP12.69□□□□□ -0.38
ITSN1-201ENST00000379960 CWC27Q6UX04 472 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms