RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 COL11A2P13942 1736 aaPredicted RBP25.5■■□□□ 1.67
RER1-204ENST00000378518 DPEP1P16444 411 aa25.5■■□□□ 1.67
RER1-204ENST00000378518 TRIM28Q13263 835 aaKnown RBP25.5■■□□□ 1.67
RER1-204ENST00000378518 NUTM1Q86Y26 1132 aa25.5■■□□□ 1.67
RER1-204ENST00000378518 DNAAF4Q8WXU2 420 aa25.5■■□□□ 1.67
RER1-204ENST00000378518 TRMT112Q9UI30 125 aaKnown RBP25.5■■□□□ 1.67
RER1-204ENST00000378518 RIC1Q4ADV7 1423 aa25.49■■□□□ 1.67
RER1-204ENST00000378518 PTPRCP08575 1304 aa25.49■■□□□ 1.67
RER1-204ENST00000378518 A0A0G2JLW4 131 aa25.49■■□□□ 1.67
RER1-204ENST00000378518 H0YIN7 160 aa25.49■■□□□ 1.67
RER1-204ENST00000378518 ERFEQ4G0M1 354 aa25.49■■□□□ 1.67
RER1-204ENST00000378518 C2CD5Q86YS7 1000 aa25.49■■□□□ 1.67
RER1-204ENST00000378518 TNRC6CQ9HCJ0 1690 aaKnown RBP25.48■■□□□ 1.67
RER1-204ENST00000378518 SH3TC1Q8TE82 1336 aa25.48■■□□□ 1.67
RER1-204ENST00000378518 CCDC191Q8NCU4 936 aa25.48■■□□□ 1.67
RER1-204ENST00000378518 YTHDC1Q96MU7 727 aaKnown RBP25.48■■□□□ 1.67
RER1-204ENST00000378518 LAMB2P55268 1798 aa25.48■■□□□ 1.67
RER1-204ENST00000378518 ABCC12Q96J65 1359 aa25.47■■□□□ 1.67
RER1-204ENST00000378518 RARSP54136 660 aaKnown RBP25.47■■□□□ 1.67
RER1-204ENST00000378518 PELP1Q8IZL8 1130 aaKnown RBP25.47■■□□□ 1.67
RER1-204ENST00000378518 CWC25Q9NXE8 425 aaPredicted RBP25.47■■□□□ 1.67
RER1-204ENST00000378518 CACNA1SQ13698 1873 aa25.47■■□□□ 1.67
RER1-204ENST00000378518 CHRNA5P30532 468 aa25.46■■□□□ 1.67
RER1-204ENST00000378518 DDX60Q8IY21 1712 aaKnown RBP25.46■■□□□ 1.67
RER1-204ENST00000378518 GPR162Q16538 588 aa25.45■■□□□ 1.66
RER1-204ENST00000378518 PIM2Q9P1W9 311 aa25.45■■□□□ 1.66
RER1-204ENST00000378518 ARFGEF1Q9Y6D6 1849 aa25.44■■□□□ 1.66
RER1-204ENST00000378518 KIF16BQ96L93 1317 aa25.44■■□□□ 1.66
RER1-204ENST00000378518 F6X3S4 739 aa25.44■■□□□ 1.66
RER1-204ENST00000378518 BRPF1P55201 1214 aaPredicted RBP25.44■■□□□ 1.66
RER1-204ENST00000378518 IGKV5-2P06315 115 aa25.43■■□□□ 1.66
RER1-204ENST00000378518 LINS1Q8NG48 757 aa25.43■■□□□ 1.66
RER1-204ENST00000378518 NEURL1BA8MQ27 555 aa25.42■■□□□ 1.66
RER1-204ENST00000378518 HSP90B1P14625 803 aaKnown RBP25.42■■□□□ 1.66
RER1-204ENST00000378518 KCNA3P22001 575 aa25.42■■□□□ 1.66
RER1-204ENST00000378518 CWF19L2Q2TBE0 894 aaKnown RBP25.42■■□□□ 1.66
RER1-204ENST00000378518 SLC10A5Q5PT55 438 aa25.42■■□□□ 1.66
RER1-204ENST00000378518 SLC4A10Q6U841 1118 aa25.42■■□□□ 1.66
RER1-204ENST00000378518 ZBTB38Q8NAP3 1195 aaPredicted RBP25.42■■□□□ 1.66
RER1-204ENST00000378518 ZNF622Q969S3 477 aaKnown RBP eCLIP25.42■■□□□ 1.66
RER1-204ENST00000378518 NLRP3Q96P20 1036 aa25.42■■□□□ 1.66
RER1-204ENST00000378518 WWC3Q9ULE0 1092 aa25.42■■□□□ 1.66
RER1-204ENST00000378518 KLRG2A4D1S0 409 aaPredicted RBP25.41■■□□□ 1.66
RER1-204ENST00000378518 FAM89AQ96GI7 184 aa25.41■■□□□ 1.66
RER1-204ENST00000378518 MASTLQ96GX5 879 aa25.41■■□□□ 1.66
RER1-204ENST00000378518 MYH3P11055 1940 aa25.4■■□□□ 1.66
RER1-204ENST00000378518 PCCAP05165 728 aaPredicted RBP25.4■■□□□ 1.66
RER1-204ENST00000378518 SRGNP10124 158 aa25.4■■□□□ 1.66
RER1-204ENST00000378518 NPR1P16066 1061 aa25.4■■□□□ 1.66
RER1-204ENST00000378518 DALRD3Q5D0E6 543 aaKnown RBP25.4■■□□□ 1.66
RER1-204ENST00000378518 STYK1Q6J9G0 422 aa25.4■■□□□ 1.66
RER1-204ENST00000378518 NOB1Q9ULX3 412 aaKnown RBP25.4■■□□□ 1.66
RER1-204ENST00000378518 BCS1LQ9Y276 419 aa25.4■■□□□ 1.66
RER1-204ENST00000378518 RTL5Q5HYW3 569 aaPredicted RBP25.39■■□□□ 1.66
RER1-204ENST00000378518 BEND3Q5T5X7 828 aa25.39■■□□□ 1.66
RER1-204ENST00000378518 RPGRQ92834 1020 aaKnown RBP25.39■■□□□ 1.66
RER1-204ENST00000378518 CNKSR1Q969H4 720 aa25.39■■□□□ 1.66
RER1-204ENST00000378518 API5Q9BZZ5 524 aaKnown RBP25.39■■□□□ 1.66
RER1-204ENST00000378518 IRS4O14654 1257 aaPredicted RBP25.38■■□□□ 1.65
RER1-204ENST00000378518 HCLS1P14317 486 aaPredicted RBP25.38■■□□□ 1.65
RER1-204ENST00000378518 TTLL6Q8N841 843 aa25.38■■□□□ 1.65
RER1-204ENST00000378518 SRCIN1Q9C0H9 1055 aa25.38■■□□□ 1.65
RER1-204ENST00000378518 IPO8O15397 1037 aaKnown RBP25.37■■□□□ 1.65
RER1-204ENST00000378518 GRIN3BO60391 1043 aa25.37■■□□□ 1.65
RER1-204ENST00000378518 ALDH1L1O75891 902 aa25.37■■□□□ 1.65
RER1-204ENST00000378518 GCKRQ14397 625 aa25.37■■□□□ 1.65
RER1-204ENST00000378518 CRY2Q49AN0 593 aa25.37■■□□□ 1.65
RER1-204ENST00000378518 SYNE4Q8N205 404 aa25.37■■□□□ 1.65
RER1-204ENST00000378518 CDHR2Q9BYE9 1310 aa25.37■■□□□ 1.65
RER1-204ENST00000378518 BCAR3O75815 825 aa25.36■■□□□ 1.65
RER1-204ENST00000378518 YBX3P16989 372 aaKnown RBP eCLIP25.36■■□□□ 1.654e-10■■□□□ 11.6
RER1-204ENST00000378518 ALDH1B1P30837 517 aa25.35■■□□□ 1.65
RER1-204ENST00000378518 ARHGAP45Q92619 1136 aa25.35■■□□□ 1.65
RER1-204ENST00000378518 RBM17Q96I25 401 aaKnown RBP25.35■■□□□ 1.65
RER1-204ENST00000378518 FRAT1Q92837 279 aaPredicted RBP25.34■■□□□ 1.65
RER1-204ENST00000378518 SLX4Q8IY92 1834 aa25.34■■□□□ 1.65
RER1-204ENST00000378518 PDE8AO60658 829 aa25.33■■□□□ 1.65
RER1-204ENST00000378518 UBE3BQ7Z3V4 1068 aa25.33■■□□□ 1.65
RER1-204ENST00000378518 CHD4Q14839 1912 aa25.32■■□□□ 1.64
RER1-204ENST00000378518 H7C1W4 665 aa25.32■■□□□ 1.64
RER1-204ENST00000378518 C3orf67Q6ZVT6 689 aa25.32■■□□□ 1.64
RER1-204ENST00000378518 JARID2Q92833 1246 aaPredicted RBP25.32■■□□□ 1.64
RER1-204ENST00000378518 C9orf78Q9NZ63 289 aaPredicted RBP25.32■■□□□ 1.64
RER1-204ENST00000378518 HOXA10P31260 410 aaPredicted RBP25.31■■□□□ 1.64
RER1-204ENST00000378518 CCT4P50991 539 aaKnown RBP25.31■■□□□ 1.64
RER1-204ENST00000378518 ZKSCAN2Q63HK3 967 aa25.31■■□□□ 1.64
RER1-204ENST00000378518 PRPF40BQ6NWY9 871 aaKnown RBP25.31■■□□□ 1.64
RER1-204ENST00000378518 SF3B3Q15393 1217 aaKnown RBP25.3■■□□□ 1.64
RER1-204ENST00000378518 DDX46Q7L014 1031 aaKnown RBP25.3■■□□□ 1.64
RER1-204ENST00000378518 CRAMP1Q96RY5 1269 aa25.3■■□□□ 1.64
RER1-204ENST00000378518 GRM8O00222 908 aa25.29■■□□□ 1.64
RER1-204ENST00000378518 ATF7IPQ6VMQ6 1270 aa25.29■■□□□ 1.64
RER1-204ENST00000378518 RCAN3Q9UKA8 241 aa25.28■■□□□ 1.64
RER1-204ENST00000378518 TAF1P21675 1872 aa25.28■■□□□ 1.64
RER1-204ENST00000378518 CCDC152Q4G0S7 254 aa25.27■■□□□ 1.64
RER1-204ENST00000378518 SOGA3Q5TF21 947 aa25.27■■□□□ 1.64
RER1-204ENST00000378518 TRIM27P14373 513 aa25.26■■□□□ 1.63
RER1-204ENST00000378518 CASP7P55210 303 aa25.26■■□□□ 1.63
RER1-204ENST00000378518 CTSWP56202 376 aa25.26■■□□□ 1.63
RER1-204ENST00000378518 PLA2G12BQ9BX93 195 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms