RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CREB3L3Q68CJ9 461 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 NPHP3Q7Z494 1330 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 LRP10Q7Z4F1 713 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 MST1RQ04912 1400 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 OFD1O75665 1012 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
BEST1-201ENST00000378043 GJB2P29033 226 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 RIC3Q7Z5B4 369 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 MTMR6Q9Y217 621 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 CYP46A1Q9Y6A2 500 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 GCKRQ14397 625 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
BEST1-201ENST00000378043 XAGE3Q8WTP9 111 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 BOLA2Q9H3K6 86 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 TAF6LQ9Y6J9 622 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 MRC1P22897 1456 aa13.11□□□□□ -0.31
BEST1-201ENST00000378043 ZNF500O60304 480 aaPredicted RBP13.11□□□□□ -0.31
BEST1-201ENST00000378043 COPS6Q7L5N1 327 aa13.11□□□□□ -0.31
BEST1-201ENST00000378043 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
BEST1-201ENST00000378043 PHKG2P15735 406 aa13.11□□□□□ -0.31
BEST1-201ENST00000378043 NECAB1Q8N987 351 aa13.11□□□□□ -0.31
BEST1-201ENST00000378043 TPCN1Q9ULQ1 816 aa13.11□□□□□ -0.31
BEST1-201ENST00000378043 ZKSCAN5Q9Y2L8 839 aa13.11□□□□□ -0.31
BEST1-201ENST00000378043 MEGF6O75095 1541 aa13.1□□□□□ -0.31
BEST1-201ENST00000378043 KIF1AQ12756 1690 aa13.1□□□□□ -0.31
BEST1-201ENST00000378043 SLC27A2O14975 620 aa13.1□□□□□ -0.31
BEST1-201ENST00000378043 RAPGEF4Q8WZA2 1011 aa13.1□□□□□ -0.31
BEST1-201ENST00000378043 METTL22Q9BUU2 404 aaPredicted RBP13.1□□□□□ -0.31
BEST1-201ENST00000378043 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
BEST1-201ENST00000378043 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
BEST1-201ENST00000378043 COL18A1P39060 1754 aa13.1□□□□□ -0.31
BEST1-201ENST00000378043 MED23Q9ULK4 1368 aa13.1□□□□□ -0.31
BEST1-201ENST00000378043 PHF14O94880 888 aa13.1□□□□□ -0.31
BEST1-201ENST00000378043 ZKSCAN1P17029 563 aaPredicted RBP13.1□□□□□ -0.31
BEST1-201ENST00000378043 UBE2HP62256 183 aa13.1□□□□□ -0.31
BEST1-201ENST00000378043 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
BEST1-201ENST00000378043 NLRP2Q9NX02 1062 aa13.1□□□□□ -0.31
BEST1-201ENST00000378043 FIBPO43427 364 aa13.09□□□□□ -0.31
BEST1-201ENST00000378043 PIP4K2AP48426 406 aaPredicted RBP13.09□□□□□ -0.31
BEST1-201ENST00000378043 DNM1Q05193 864 aaKnown RBP13.09□□□□□ -0.31
BEST1-201ENST00000378043 CCDC183Q5T5S1 534 aa13.09□□□□□ -0.31
BEST1-201ENST00000378043 PROSER2Q86WR7 435 aaPredicted RBP13.09□□□□□ -0.31
BEST1-201ENST00000378043 JARID2Q92833 1246 aaPredicted RBP13.09□□□□□ -0.31
BEST1-201ENST00000378043 EDC3Q96F86 508 aaKnown RBP13.09□□□□□ -0.31
BEST1-201ENST00000378043 MYD88Q99836 296 aa13.09□□□□□ -0.31
BEST1-201ENST00000378043 HIP1O00291 1037 aa13.09□□□□□ -0.31
BEST1-201ENST00000378043 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
BEST1-201ENST00000378043 ZNF589Q86UQ0 364 aaPredicted RBP13.09□□□□□ -0.31
BEST1-201ENST00000378043 RFX5P48382 616 aaPredicted RBP13.08□□□□□ -0.32
BEST1-201ENST00000378043 NEXNQ0ZGT2 675 aa13.08□□□□□ -0.32
BEST1-201ENST00000378043 DDX17Q92841 729 aaKnown RBP13.08□□□□□ -0.32
BEST1-201ENST00000378043 FSD1Q9BTV5 496 aa13.08□□□□□ -0.32
BEST1-201ENST00000378043 AFDNP55196 1824 aaKnown RBP13.08□□□□□ -0.32
BEST1-201ENST00000378043 JCADQ9P266 1359 aa13.08□□□□□ -0.32
BEST1-201ENST00000378043 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
BEST1-201ENST00000378043 TCEANC2Q96MN5 208 aa13.08□□□□□ -0.32
BEST1-201ENST00000378043 C19orf44Q9H6X5 657 aa13.08□□□□□ -0.32
BEST1-201ENST00000378043 COPRSQ9NQ92 184 aa13.08□□□□□ -0.32
BEST1-201ENST00000378043 ATP6V1DQ9Y5K8 247 aa13.08□□□□□ -0.32
BEST1-201ENST00000378043 KCNJ4P48050 445 aa13.07□□□□□ -0.32
BEST1-201ENST00000378043 CCDC39Q9UFE4 941 aa13.07□□□□□ -0.32
BEST1-201ENST00000378043 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
BEST1-201ENST00000378043 COL15A1P39059 1388 aa13.07□□□□□ -0.32
BEST1-201ENST00000378043 CYP27B1O15528 508 aa13.07□□□□□ -0.32
BEST1-201ENST00000378043 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
BEST1-201ENST00000378043 PTPN12Q05209 780 aaKnown RBP13.07□□□□□ -0.32
BEST1-201ENST00000378043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.32
BEST1-201ENST00000378043 ARFGEF2Q9Y6D5 1785 aa13.07□□□□□ -0.32
BEST1-201ENST00000378043 MCM5P33992 734 aa13.06□□□□□ -0.32
BEST1-201ENST00000378043 FUCA2Q9BTY2 467 aa13.06□□□□□ -0.32
BEST1-201ENST00000378043 TAF5LO75529 589 aa13.06□□□□□ -0.32
BEST1-201ENST00000378043 CHGBP05060 677 aa13.06□□□□□ -0.32
BEST1-201ENST00000378043 TOB2Q14106 344 aaPredicted RBP13.06□□□□□ -0.32
BEST1-201ENST00000378043 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
BEST1-201ENST00000378043 IFNL2Q8IZJ0 200 aa13.06□□□□□ -0.32
BEST1-201ENST00000378043 FAM184AQ8NB25 1140 aa13.06□□□□□ -0.32
BEST1-201ENST00000378043 VPS37CA5D8V6 355 aaPredicted RBP13.05□□□□□ -0.32
BEST1-201ENST00000378043 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
BEST1-201ENST00000378043 HCLS1P14317 486 aaPredicted RBP13.05□□□□□ -0.32
BEST1-201ENST00000378043 RABL6Q3YEC7 729 aaPredicted RBP13.05□□□□□ -0.32
BEST1-201ENST00000378043 CABLES1Q8TDN4 633 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 NDUFB9Q9Y6M9 179 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 GLI3P10071 1580 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 TPM2P07951 284 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 RPS6KB1P23443 525 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 PSMA5P28066 241 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 TFCP2Q12800 502 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 UVSSAQ2YD98 709 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 TSGA10IPQ3SY00 556 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 TNNI3KQ59H18 835 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 CDC37L1Q7L3B6 337 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 UBE3BQ7Z3V4 1068 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 FPGT-TNNI3KV9GXZ4 949 aa13.05□□□□□ -0.32
BEST1-201ENST00000378043 ATP5JP18859 108 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 USPL1Q5W0Q7 1092 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 214.8 ms