RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 TMEM132AQ24JP5 1023 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 AACSQ86V21 672 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 NAP1L3Q99457 506 aaPredicted RBP6.93□□□□□ -1.3
CUBN-202ENST00000377833 BACH2Q9BYV9 841 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 IFIT5Q13325 482 aaKnown RBP6.93□□□□□ -1.3
CUBN-202ENST00000377833 ZNF592Q92610 1267 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 SMARCC1Q92922 1105 aaPredicted RBP6.93□□□□□ -1.3
CUBN-202ENST00000377833 RRP7AQ9Y3A4 280 aaKnown RBP6.93□□□□□ -1.3
CUBN-202ENST00000377833 BICDL2A1A5D9 508 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 SETBP1Q9Y6X0 1596 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 ACTN2P35609 894 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 BRAPQ7Z569 592 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 TRPM1Q7Z4N2 1603 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 ABCD1P33897 745 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 FAM193AP78312 1265 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 HDAC1Q13547 482 aaPredicted RBP6.93□□□□□ -1.3
CUBN-202ENST00000377833 ESCO1Q5FWF5 840 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 NOL8Q76FK4 1167 aaKnown RBP6.93□□□□□ -1.3
CUBN-202ENST00000377833 EXOC6Q8TAG9 804 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 TCP11L1Q9NUJ3 509 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 NEBLO76041 1014 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 LTV1Q96GA3 475 aaPredicted RBP6.93□□□□□ -1.3
CUBN-202ENST00000377833 PDRG1Q9NUG6 133 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 ATP10AO60312 1499 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 NFKBIBQ15653 356 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 MAST3O60307 1309 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 SLC4A2P04920 1241 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 CALML3P27482 149 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 CATIPQ7Z7H3 387 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 CDK12Q9NYV4 1490 aaPredicted RBP6.93□□□□□ -1.3
CUBN-202ENST00000377833 SWAP70Q9UH65 585 aa6.93□□□□□ -1.3
CUBN-202ENST00000377833 SBNO1A3KN83 1393 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 PABPN1LA6NDY0 278 aaKnown RBP6.92□□□□□ -1.3
CUBN-202ENST00000377833 BLMP54132 1417 aaPredicted RBP6.92□□□□□ -1.3
CUBN-202ENST00000377833 ALDH1L1O75891 902 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 TAOK2Q9UL54 1235 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 PCDH11XQ9BZA7 1347 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 PCDH11YQ9BZA8 1340 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 CCDC82Q8N4S0 544 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 EFCAB6Q5THR3 1501 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 TRAK2O60296 914 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 SLC17A8Q8NDX2 589 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 ADAMTS8Q9UP79 889 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 NOS1P29475 1434 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 TRIM14Q14142 442 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 PPP1R42Q7Z4L9 355 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 UBXN4Q92575 508 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 USP32Q8NFA0 1604 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 UQCRFS1P1P0C7P4 283 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 ATP2A2P16615 1042 aaKnown RBP6.92□□□□□ -1.3
CUBN-202ENST00000377833 LMBR1Q8WVP7 490 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 CDK19Q9BWU1 502 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 SLC12A7Q9Y666 1083 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 PPP2R5EQ16537 467 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 ZFYVE27Q5T4F4 411 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 PDCL3Q9H2J4 239 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 PRDM15P57071 1507 aaPredicted RBP6.92□□□□□ -1.3
CUBN-202ENST00000377833 LIMCH1Q9UPQ0 1083 aa6.92□□□□□ -1.3
CUBN-202ENST00000377833 NLRP1Q9C000 1473 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 MCTP2Q6DN12 878 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 TMOD4Q9NZQ9 345 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 UBE2HP62256 183 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 TAF7Q15545 349 aaPredicted RBP6.91□□□□□ -1.3
CUBN-202ENST00000377833 CALCOCO1Q9P1Z2 691 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 DYNC1I1O14576 645 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 GTF2F1P35269 517 aaKnown RBP eCLIP6.91□□□□□ -1.3
CUBN-202ENST00000377833 NAPBQ9H115 298 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 QRICH2Q9H0J4 1663 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 EIF5P55010 431 aaKnown RBP6.91□□□□□ -1.3
CUBN-202ENST00000377833 INTS4Q96HW7 963 aaKnown RBP6.91□□□□□ -1.3
CUBN-202ENST00000377833 ATP5DP30049 168 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 TOM1L2Q6ZVM7 507 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 PDILTQ8N807 584 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 LZTS2Q9BRK4 669 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 AMER1Q5JTC6 1135 aaPredicted RBP6.91□□□□□ -1.3
CUBN-202ENST00000377833 CALML4Q96GE6 196 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 TSNARE1Q96NA8 513 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 IKBKGQ9Y6K9 419 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 ALDH3A1P30838 453 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 CTR9Q6PD62 1173 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 ZNF804AQ7Z570 1209 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 TMCO3Q6UWJ1 677 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 LNPKQ9C0E8 428 aa6.91□□□□□ -1.3
CUBN-202ENST00000377833 NBPF7P0C2Y1 421 aaPredicted RBP6.9□□□□□ -1.3
CUBN-202ENST00000377833 GBP1P32455 592 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 KIAA1328Q86T90 577 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 CEP112Q8N8E3 955 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 NYXQ9GZU5 481 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 MLH3Q9UHC1 1453 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 KLHL40Q2TBA0 621 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 ZCCHC11Q5TAX3 1644 aaKnown RBP6.9□□□□□ -1.3
CUBN-202ENST00000377833 IBTKQ9P2D0 1353 aaPredicted RBP6.9□□□□□ -1.3
CUBN-202ENST00000377833 RAD21O60216 631 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 FERP16591 822 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 PAF1Q8N7H5 531 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 IQSEC3Q9UPP2 1182 aaPredicted RBP6.9□□□□□ -1.3
CUBN-202ENST00000377833 ZNF710Q8N1W2 664 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 IMPG2Q9BZV3 1241 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 LRP2BPQ9P2M1 347 aa6.9□□□□□ -1.3
CUBN-202ENST00000377833 PPP1R2P3Q6NXS1 205 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms