RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 DDX19BQ9UMR2 479 aa24.21■■□□□ 1.47
SPSB1-203ENST00000377399 CWF19L2Q2TBE0 894 aaKnown RBP24.2■■□□□ 1.46
SPSB1-203ENST00000377399 CHMP4BQ9H444 224 aaKnown RBP24.2■■□□□ 1.46
SPSB1-203ENST00000377399 NEURL1BA8MQ27 555 aa24.19■■□□□ 1.46
SPSB1-203ENST00000377399 IGKV5-2P06315 115 aa24.19■■□□□ 1.46
SPSB1-203ENST00000377399 GPTP24298 496 aa24.19■■□□□ 1.46
SPSB1-203ENST00000377399 PELP1Q8IZL8 1130 aaKnown RBP24.19■■□□□ 1.46
SPSB1-203ENST00000377399 ISCA1Q9BUE6 129 aa24.19■■□□□ 1.46
SPSB1-203ENST00000377399 CWC25Q9NXE8 425 aaPredicted RBP24.19■■□□□ 1.46
SPSB1-203ENST00000377399 NIP7Q9Y221 180 aaKnown RBP eCLIP24.19■■□□□ 1.46
SPSB1-203ENST00000377399 CCDC191Q8NCU4 936 aa24.18■■□□□ 1.46
SPSB1-203ENST00000377399 BCL2L12Q9HB09 334 aa24.18■■□□□ 1.46
SPSB1-203ENST00000377399 GYS1P13807 737 aa24.17■■□□□ 1.46
SPSB1-203ENST00000377399 PARP10Q53GL7 1025 aa24.17■■□□□ 1.46
SPSB1-203ENST00000377399 ZNF34Q8IZ26 560 aa24.17■■□□□ 1.46
SPSB1-203ENST00000377399 C9orf78Q9NZ63 289 aaPredicted RBP24.17■■□□□ 1.46
SPSB1-203ENST00000377399 IBTKQ9P2D0 1353 aaPredicted RBP24.16■■□□□ 1.46
SPSB1-203ENST00000377399 TRIM28Q13263 835 aaKnown RBP24.16■■□□□ 1.46
SPSB1-203ENST00000377399 BICDL1Q6ZP65 573 aa24.16■■□□□ 1.46
SPSB1-203ENST00000377399 NLGN2Q8NFZ4 835 aa24.16■■□□□ 1.46
SPSB1-203ENST00000377399 FKBP8Q14318 412 aa24.15■■□□□ 1.46
SPSB1-203ENST00000377399 GCKRQ14397 625 aa24.15■■□□□ 1.46
SPSB1-203ENST00000377399 TBC1D9BQ66K14 1250 aa24.15■■□□□ 1.46
SPSB1-203ENST00000377399 NLRP10Q86W26 655 aa24.15■■□□□ 1.46
SPSB1-203ENST00000377399 SETDB2Q96T68 719 aa24.15■■□□□ 1.46
SPSB1-203ENST00000377399 GRIN3BO60391 1043 aa24.14■■□□□ 1.45
SPSB1-203ENST00000377399 GNAI3P08754 354 aa24.14■■□□□ 1.45
SPSB1-203ENST00000377399 NLGN1Q8N2Q7 840 aa24.14■■□□□ 1.45
SPSB1-203ENST00000377399 UBN2Q6ZU65 1347 aa24.13■■□□□ 1.45
SPSB1-203ENST00000377399 GRM8O00222 908 aa24.13■■□□□ 1.45
SPSB1-203ENST00000377399 PPP1R42Q7Z4L9 355 aa24.13■■□□□ 1.45
SPSB1-203ENST00000377399 EXOC6Q8TAG9 804 aa24.13■■□□□ 1.45
SPSB1-203ENST00000377399 CARMIL3Q8ND23 1372 aa24.13■■□□□ 1.45
SPSB1-203ENST00000377399 UBTFL1P0CB47 393 aaPredicted RBP24.12■■□□□ 1.45
SPSB1-203ENST00000377399 MSL1Q68DK7 614 aa24.12■■□□□ 1.45
SPSB1-203ENST00000377399 MEIS3Q99687 375 aa24.12■■□□□ 1.45
SPSB1-203ENST00000377399 HDAC5Q9UQL6 1122 aa24.12■■□□□ 1.45
SPSB1-203ENST00000377399 FAM177BA6PVY3 158 aa24.11■■□□□ 1.45
SPSB1-203ENST00000377399 NFIXQ14938 502 aa24.11■■□□□ 1.45
SPSB1-203ENST00000377399 UTP14AQ9BVJ6 771 aaKnown RBP24.11■■□□□ 1.45
SPSB1-203ENST00000377399 TRMT112Q9UI30 125 aaKnown RBP24.11■■□□□ 1.45
SPSB1-203ENST00000377399 CD2APQ9Y5K6 639 aa24.11■■□□□ 1.45
SPSB1-203ENST00000377399 ZBTB7BO15156 539 aaPredicted RBP24.1■■□□□ 1.45
SPSB1-203ENST00000377399 NPHP1O15259 732 aa24.1■■□□□ 1.45
SPSB1-203ENST00000377399 UBE3BQ7Z3V4 1068 aa24.1■■□□□ 1.45
SPSB1-203ENST00000377399 NYXQ9GZU5 481 aa24.1■■□□□ 1.45
SPSB1-203ENST00000377399 USP44Q9H0E7 712 aa24.1■■□□□ 1.45
SPSB1-203ENST00000377399 PCCAP05165 728 aaPredicted RBP24.09■■□□□ 1.45
SPSB1-203ENST00000377399 C1QTNF8P60827 252 aa24.09■■□□□ 1.45
SPSB1-203ENST00000377399 AAMPQ13685 434 aa24.09■■□□□ 1.45
SPSB1-203ENST00000377399 SUSD4Q5VX71 490 aa24.09■■□□□ 1.45
SPSB1-203ENST00000377399 NBPF5PQ86XG9 351 aaPredicted RBP24.09■■□□□ 1.45
SPSB1-203ENST00000377399 ZBTB38Q8NAP3 1195 aaPredicted RBP24.09■■□□□ 1.45
SPSB1-203ENST00000377399 UTYO14607 1347 aa24.08■■□□□ 1.44
SPSB1-203ENST00000377399 NBPF7P0C2Y1 421 aaPredicted RBP24.07■■□□□ 1.44
SPSB1-203ENST00000377399 YBX3P16989 372 aaKnown RBP eCLIP24.07■■□□□ 1.44
SPSB1-203ENST00000377399 GTF2E1P29083 439 aaPredicted RBP24.07■■□□□ 1.44
SPSB1-203ENST00000377399 RTL5Q5HYW3 569 aaPredicted RBP24.07■■□□□ 1.44
SPSB1-203ENST00000377399 SH3TC1Q8TE82 1336 aa24.07■■□□□ 1.44
SPSB1-203ENST00000377399 H7C1W4 665 aa24.06■■□□□ 1.44
SPSB1-203ENST00000377399 NTSR2O95665 410 aa24.06■■□□□ 1.44
SPSB1-203ENST00000377399 GNAI2P04899 355 aa24.06■■□□□ 1.44
SPSB1-203ENST00000377399 HSP90B1P14625 803 aaKnown RBP24.06■■□□□ 1.44
SPSB1-203ENST00000377399 TM4SF1P30408 202 aa24.06■■□□□ 1.44
SPSB1-203ENST00000377399 ZBTB40Q9NUA8 1239 aa24.06■■□□□ 1.44
SPSB1-203ENST00000377399 MMP10P09238 476 aa24.05■■□□□ 1.44
SPSB1-203ENST00000377399 ERICH6BQ5W0A0 696 aa24.05■■□□□ 1.44
SPSB1-203ENST00000377399 TPTE2Q6XPS3 522 aa24.05■■□□□ 1.44
SPSB1-203ENST00000377399 JARID2Q92833 1246 aaPredicted RBP24.05■■□□□ 1.44
SPSB1-203ENST00000377399 FAM89AQ96GI7 184 aa24.05■■□□□ 1.44
SPSB1-203ENST00000377399 PARP3Q9Y6F1 533 aa24.05■■□□□ 1.44
SPSB1-203ENST00000377399 CDHR2Q9BYE9 1310 aa24.05■■□□□ 1.44
SPSB1-203ENST00000377399 GOLGB1Q14789 3259 aaKnown RBP24.04■■□□□ 1.44
SPSB1-203ENST00000377399 CNBD1Q8NA66 436 aa24.04■■□□□ 1.44
SPSB1-203ENST00000377399 C1orf115Q9H7X2 142 aa24.04■■□□□ 1.44
SPSB1-203ENST00000377399 LRRFIP2Q9Y608 721 aaKnown RBP24.04■■□□□ 1.44
SPSB1-203ENST00000377399 POLRMTO00411 1230 aaKnown RBP24.03■■□□□ 1.44
SPSB1-203ENST00000377399 SERPINB2P05120 415 aa24.03■■□□□ 1.44
SPSB1-203ENST00000377399 DDR1Q08345 913 aa24.03■■□□□ 1.44
SPSB1-203ENST00000377399 LAMB2P55268 1798 aa24.02■■□□□ 1.44
SPSB1-203ENST00000377399 IRS4O14654 1257 aaPredicted RBP24.02■■□□□ 1.44
SPSB1-203ENST00000377399 CASP7P55210 303 aa24.02■■□□□ 1.44
SPSB1-203ENST00000377399 ST5P78524 1137 aa24.02■■□□□ 1.44
SPSB1-203ENST00000377399 NUTM1Q86Y26 1132 aa24.02■■□□□ 1.44
SPSB1-203ENST00000377399 SUCLG2Q96I99 432 aa24.02■■□□□ 1.44
SPSB1-203ENST00000377399 ERFEQ4G0M1 354 aa24■■□□□ 1.43
SPSB1-203ENST00000377399 PDE8AO60658 829 aa23.98■■□□□ 1.43
SPSB1-203ENST00000377399 PRR5LQ6MZQ0 368 aa23.98■■□□□ 1.43
SPSB1-203ENST00000377399 SYNE4Q8N205 404 aa23.98■■□□□ 1.43
SPSB1-203ENST00000377399 PLA2G12BQ9BX93 195 aa23.98■■□□□ 1.43
SPSB1-203ENST00000377399 BICC1Q9H694 974 aaKnown RBP23.98■■□□□ 1.43
SPSB1-203ENST00000377399 ABCC12Q96J65 1359 aa23.98■■□□□ 1.43
SPSB1-203ENST00000377399 DDX60Q8IY21 1712 aaKnown RBP23.98■■□□□ 1.43
SPSB1-203ENST00000377399 NRXN2Q9P2S2 1712 aa23.98■■□□□ 1.43
SPSB1-203ENST00000377399 MYH3P11055 1940 aa23.98■■□□□ 1.43
SPSB1-203ENST00000377399 HCLS1P14317 486 aaPredicted RBP23.97■■□□□ 1.43
SPSB1-203ENST00000377399 RIC1Q4ADV7 1423 aa23.96■■□□□ 1.43
SPSB1-203ENST00000377399 CHMP3Q9Y3E7 222 aa23.96■■□□□ 1.43
SPSB1-203ENST00000377399 CTSWP56202 376 aa23.95■■□□□ 1.42
SPSB1-203ENST00000377399 CEP85Q6P2H3 762 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms