RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 MEIS3Q99687 375 aa26.89■■□□□ 1.9
CBWD3-202ENST00000377342 USP44Q9H0E7 712 aa26.89■■□□□ 1.9
CBWD3-202ENST00000377342 DDX19BQ9UMR2 479 aa26.89■■□□□ 1.9
CBWD3-202ENST00000377342 EXOC6Q8TAG9 804 aa26.89■■□□□ 1.89
CBWD3-202ENST00000377342 CARMIL3Q8ND23 1372 aa26.88■■□□□ 1.89
CBWD3-202ENST00000377342 SOCS7O14512 581 aa26.88■■□□□ 1.89
CBWD3-202ENST00000377342 ZBTB7BO15156 539 aaPredicted RBP26.88■■□□□ 1.89
CBWD3-202ENST00000377342 MSL1Q68DK7 614 aa26.88■■□□□ 1.89
CBWD3-202ENST00000377342 UTYO14607 1347 aa26.87■■□□□ 1.89
CBWD3-202ENST00000377342 PSDA5PKW4 1024 aaPredicted RBP26.87■■□□□ 1.89
CBWD3-202ENST00000377342 DDR1Q08345 913 aa26.87■■□□□ 1.89
CBWD3-202ENST00000377342 PARP10Q53GL7 1025 aa26.87■■□□□ 1.89
CBWD3-202ENST00000377342 SUSD4Q5VX71 490 aa26.87■■□□□ 1.89
CBWD3-202ENST00000377342 GRM8O00222 908 aa26.86■■□□□ 1.89
CBWD3-202ENST00000377342 NBPF7P0C2Y1 421 aaPredicted RBP26.86■■□□□ 1.89
CBWD3-202ENST00000377342 TM4SF1P30408 202 aa26.86■■□□□ 1.89
CBWD3-202ENST00000377342 MYH3P11055 1940 aa26.86■■□□□ 1.89
CBWD3-202ENST00000377342 NTSR2O95665 410 aa26.85■■□□□ 1.89
CBWD3-202ENST00000377342 CASP7P55210 303 aa26.85■■□□□ 1.89
CBWD3-202ENST00000377342 NLGN1Q8N2Q7 840 aa26.85■■□□□ 1.89
CBWD3-202ENST00000377342 SETDB2Q96T68 719 aa26.85■■□□□ 1.89
CBWD3-202ENST00000377342 JARID2Q92833 1246 aaPredicted RBP26.84■■□□□ 1.89
CBWD3-202ENST00000377342 TNRC6CQ9HCJ0 1690 aaKnown RBP26.84■■□□□ 1.89
CBWD3-202ENST00000377342 H7C1W4 665 aa26.83■■□□□ 1.89
CBWD3-202ENST00000377342 NEFLP07196 543 aa26.83■■□□□ 1.89
CBWD3-202ENST00000377342 UBE3BQ7Z3V4 1068 aa26.83■■□□□ 1.89
CBWD3-202ENST00000377342 SLC16A10Q8TF71 515 aa26.83■■□□□ 1.89
CBWD3-202ENST00000377342 ZBTB40Q9NUA8 1239 aa26.83■■□□□ 1.89
CBWD3-202ENST00000377342 FAM177BA6PVY3 158 aa26.82■■□□□ 1.88
CBWD3-202ENST00000377342 POLRMTO00411 1230 aaKnown RBP26.82■■□□□ 1.88
CBWD3-202ENST00000377342 C9orf78Q9NZ63 289 aaPredicted RBP26.82■■□□□ 1.88
CBWD3-202ENST00000377342 ANKRD31Q8N7Z5 1873 aa26.82■■□□□ 1.88
CBWD3-202ENST00000377342 PCCAP05165 728 aaPredicted RBP26.82■■□□□ 1.88
CBWD3-202ENST00000377342 SYNE4Q8N205 404 aa26.82■■□□□ 1.88
CBWD3-202ENST00000377342 ZBTB38Q8NAP3 1195 aaPredicted RBP26.82■■□□□ 1.88
CBWD3-202ENST00000377342 ABCC12Q96J65 1359 aa26.81■■□□□ 1.88
CBWD3-202ENST00000377342 RTL5Q5HYW3 569 aaPredicted RBP26.81■■□□□ 1.88
CBWD3-202ENST00000377342 FAM89AQ96GI7 184 aa26.81■■□□□ 1.88
CBWD3-202ENST00000377342 UTP14AQ9BVJ6 771 aaKnown RBP26.81■■□□□ 1.88
CBWD3-202ENST00000377342 TRMT112Q9UI30 125 aaKnown RBP26.81■■□□□ 1.88
CBWD3-202ENST00000377342 MMP10P09238 476 aa26.8■■□□□ 1.88
CBWD3-202ENST00000377342 PPP1R42Q7Z4L9 355 aa26.8■■□□□ 1.88
CBWD3-202ENST00000377342 GNAI3P08754 354 aa26.79■■□□□ 1.88
CBWD3-202ENST00000377342 UBTFL1P0CB47 393 aaPredicted RBP26.79■■□□□ 1.88
CBWD3-202ENST00000377342 KAZALD1Q96I82 304 aa26.79■■□□□ 1.88
CBWD3-202ENST00000377342 C1orf115Q9H7X2 142 aa26.79■■□□□ 1.88
CBWD3-202ENST00000377342 ZBTB7AO95365 584 aa26.79■■□□□ 1.88
CBWD3-202ENST00000377342 NBPF5PQ86XG9 351 aaPredicted RBP26.79■■□□□ 1.88
CBWD3-202ENST00000377342 NUTM1Q86Y26 1132 aa26.79■■□□□ 1.88
CBWD3-202ENST00000377342 SH3TC1Q8TE82 1336 aa26.79■■□□□ 1.88
CBWD3-202ENST00000377342 CDHR2Q9BYE9 1310 aa26.79■■□□□ 1.88
CBWD3-202ENST00000377342 SUCLG2Q96I99 432 aa26.78■■□□□ 1.88
CBWD3-202ENST00000377342 SERPINB2P05120 415 aa26.77■■□□□ 1.88
CBWD3-202ENST00000377342 ERFEQ4G0M1 354 aa26.77■■□□□ 1.88
CBWD3-202ENST00000377342 LRRFIP2Q9Y608 721 aaKnown RBP26.77■■□□□ 1.88
CBWD3-202ENST00000377342 PRR5LQ6MZQ0 368 aa26.76■■□□□ 1.87
CBWD3-202ENST00000377342 NYXQ9GZU5 481 aa26.76■■□□□ 1.87
CBWD3-202ENST00000377342 MTFR1LQ9H019 292 aa26.76■■□□□ 1.87
CBWD3-202ENST00000377342 RIC1Q4ADV7 1423 aa26.75■■□□□ 1.87
CBWD3-202ENST00000377342 EPHA10Q5JZY3 1008 aa26.75■■□□□ 1.87
CBWD3-202ENST00000377342 CNBD1Q8NA66 436 aa26.75■■□□□ 1.87
CBWD3-202ENST00000377342 CHMP4BQ9H444 224 aaKnown RBP26.75■■□□□ 1.87
CBWD3-202ENST00000377342 GNAI2P04899 355 aa26.74■■□□□ 1.87
CBWD3-202ENST00000377342 KIF13BQ9NQT8 1826 aa26.74■■□□□ 1.87
CBWD3-202ENST00000377342 IRS4O14654 1257 aaPredicted RBP26.73■■□□□ 1.87
CBWD3-202ENST00000377342 TPTE2Q6XPS3 522 aa26.73■■□□□ 1.87
CBWD3-202ENST00000377342 CCDC24Q8N4L8 307 aa26.73■■□□□ 1.87
CBWD3-202ENST00000377342 PARP3Q9Y6F1 533 aa26.73■■□□□ 1.87
CBWD3-202ENST00000377342 COL11A2P13942 1736 aaPredicted RBP26.73■■□□□ 1.87
CBWD3-202ENST00000377342 PLA2G12BQ9BX93 195 aa26.73■■□□□ 1.87
CBWD3-202ENST00000377342 BICC1Q9H694 974 aaKnown RBP26.73■■□□□ 1.87
CBWD3-202ENST00000377342 HCLS1P14317 486 aaPredicted RBP26.72■■□□□ 1.87
CBWD3-202ENST00000377342 FOXO4P98177 505 aa26.72■■□□□ 1.87
CBWD3-202ENST00000377342 ANKRD44Q8N8A2 993 aa26.72■■□□□ 1.87
CBWD3-202ENST00000377342 AAMPQ13685 434 aa26.71■■□□□ 1.87
CBWD3-202ENST00000377342 SGIP1Q9BQI5 828 aa26.71■■□□□ 1.87
CBWD3-202ENST00000377342 ATF5Q9Y2D1 282 aaPredicted RBP26.71■■□□□ 1.87
CBWD3-202ENST00000377342 SLC10A5Q5PT55 438 aa26.7■■□□□ 1.87
CBWD3-202ENST00000377342 PCDHB15Q9Y5E8 787 aa26.7■■□□□ 1.87
CBWD3-202ENST00000377342 C10orf71Q711Q0 1435 aa26.7■■□□□ 1.86
CBWD3-202ENST00000377342 RABL6Q3YEC7 729 aaPredicted RBP26.7■■□□□ 1.86
CBWD3-202ENST00000377342 C3orf67Q6ZVT6 689 aa26.7■■□□□ 1.86
CBWD3-202ENST00000377342 COL4A1P02462 1669 aa26.69■■□□□ 1.86
CBWD3-202ENST00000377342 GTF2E1P29083 439 aaPredicted RBP26.69■■□□□ 1.86
CBWD3-202ENST00000377342 CEP85Q6P2H3 762 aa26.69■■□□□ 1.86
CBWD3-202ENST00000377342 PDE8AO60658 829 aa26.68■■□□□ 1.86
CBWD3-202ENST00000377342 KIAA1551Q9HCM1 1747 aa26.68■■□□□ 1.86
CBWD3-202ENST00000377342 TAF1P21675 1872 aa26.67■■□□□ 1.86
CBWD3-202ENST00000377342 PTGER2P43116 358 aa26.67■■□□□ 1.86
CBWD3-202ENST00000377342 CTSWP56202 376 aa26.67■■□□□ 1.86
CBWD3-202ENST00000377342 NPHP1O15259 732 aa26.66■■□□□ 1.86
CBWD3-202ENST00000377342 ST5P78524 1137 aa26.66■■□□□ 1.86
CBWD3-202ENST00000377342 MTX1Q13505 466 aa26.66■■□□□ 1.86
CBWD3-202ENST00000377342 SIRT2Q8IXJ6 389 aa26.66■■□□□ 1.86
CBWD3-202ENST00000377342 HDAC5Q9UQL6 1122 aa26.66■■□□□ 1.86
CBWD3-202ENST00000377342 DLEC1Q9Y238 1755 aa26.66■■□□□ 1.86
CBWD3-202ENST00000377342 SPEF2Q9C093 1822 aa26.65■■□□□ 1.86
CBWD3-202ENST00000377342 ERICH6BQ5W0A0 696 aa26.65■■□□□ 1.86
CBWD3-202ENST00000377342 LRP5O75197 1615 aa26.65■■□□□ 1.86
CBWD3-202ENST00000377342 PNMA6EA0A0J9YXQ4 647 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms