RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CNNM3Q8NE01 707 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 CCDC112Q8NEF3 446 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 STX8Q9UNK0 236 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 SLC26A6Q9BXS9 759 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 NYXQ9GZU5 481 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 IL16Q14005 1332 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 BIVM-ERCC5R4GMW8 1640 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 SPA17Q15506 151 aa15.77■□□□□ 0.12
GPC6-201ENST00000377047 ATP2B3Q16720 1220 aa15.77■□□□□ 0.12
GPC6-201ENST00000377047 ZGPATQ8N5A5 531 aaKnown RBP15.77■□□□□ 0.12
GPC6-201ENST00000377047 RTCBQ9Y3I0 505 aaKnown RBP15.77■□□□□ 0.12
GPC6-201ENST00000377047 PPFIA3O75145 1194 aa15.77■□□□□ 0.12
GPC6-201ENST00000377047 FGFR1OPO95684 399 aaKnown RBP15.77■□□□□ 0.12
GPC6-201ENST00000377047 POLD1P28340 1107 aa15.77■□□□□ 0.12
GPC6-201ENST00000377047 C19orf44Q9H6X5 657 aa15.77■□□□□ 0.12
GPC6-201ENST00000377047 PLEKHH1Q9ULM0 1364 aa15.77■□□□□ 0.12
GPC6-201ENST00000377047 ANO10Q9NW15 660 aa15.77■□□□□ 0.12
GPC6-201ENST00000377047 CETN2P41208 172 aa15.77■□□□□ 0.11
GPC6-201ENST00000377047 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.11
GPC6-201ENST00000377047 NEK1Q96PY6 1258 aa15.77■□□□□ 0.11
GPC6-201ENST00000377047 MPHOSPH6Q99547 160 aaKnown RBP15.77■□□□□ 0.11
GPC6-201ENST00000377047 FAM193AP78312 1265 aa15.77■□□□□ 0.11
GPC6-201ENST00000377047 SLC4A4Q9Y6R1 1079 aa15.77■□□□□ 0.11
GPC6-201ENST00000377047 ZNF804AQ7Z570 1209 aa15.76■□□□□ 0.11
GPC6-201ENST00000377047 TCP11L1Q9NUJ3 509 aa15.76■□□□□ 0.11
GPC6-201ENST00000377047 NFATC2IPQ8NCF5 419 aa15.76■□□□□ 0.11
GPC6-201ENST00000377047 KIF20AO95235 890 aa15.76■□□□□ 0.11
GPC6-201ENST00000377047 GJB2P29033 226 aa15.76■□□□□ 0.11
GPC6-201ENST00000377047 RHPN1Q8TCX5 695 aa15.76■□□□□ 0.11
GPC6-201ENST00000377047 TSPYL1Q9H0U9 437 aa15.76■□□□□ 0.11
GPC6-201ENST00000377047 LMBR1LQ6UX01 489 aa15.75■□□□□ 0.11
GPC6-201ENST00000377047 GBP2P32456 591 aaPredicted RBP15.75■□□□□ 0.11
GPC6-201ENST00000377047 CCDC191Q8NCU4 936 aa15.75■□□□□ 0.11
GPC6-201ENST00000377047 NBPF14Q5TI25 921 aa15.75■□□□□ 0.11
GPC6-201ENST00000377047 VSIG10Q8N0Z9 540 aa15.75■□□□□ 0.11
GPC6-201ENST00000377047 ERLIN1O75477 346 aa15.75■□□□□ 0.11
GPC6-201ENST00000377047 ORC3Q9UBD5 711 aaPredicted RBP15.75■□□□□ 0.11
GPC6-201ENST00000377047 RALGAPBQ86X10 1494 aa15.75■□□□□ 0.11
GPC6-201ENST00000377047 GRM8O00222 908 aa15.75■□□□□ 0.11
GPC6-201ENST00000377047 IDEP14735 1019 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 WTAPQ15007 396 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 NAA16Q6N069 864 aaPredicted RBP15.74■□□□□ 0.11
GPC6-201ENST00000377047 TBC1D9Q6ZT07 1266 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 VPS36Q86VN1 386 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 FSIP1Q8NA03 581 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 VEZTQ9HBM0 779 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 RBM26Q5T8P6 1007 aaKnown RBP15.74■□□□□ 0.11
GPC6-201ENST00000377047 MEIS3Q99687 375 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 CCDC183Q5T5S1 534 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 CCDC148Q8NFR7 591 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 TPTE2Q6XPS3 522 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 AMPD3Q01432 767 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 KSR2Q6VAB6 950 aa15.74■□□□□ 0.11
GPC6-201ENST00000377047 MTHFSDQ2M296 383 aaKnown RBP15.73■□□□□ 0.11
GPC6-201ENST00000377047 SYCP3Q8IZU3 236 aa15.73■□□□□ 0.11
GPC6-201ENST00000377047 CWC15Q9P013 229 aaKnown RBP15.73■□□□□ 0.11
GPC6-201ENST00000377047 IFIT1BQ5T764 474 aaKnown RBP15.73■□□□□ 0.11
GPC6-201ENST00000377047 TTC22Q5TAA0 569 aa15.73■□□□□ 0.11
GPC6-201ENST00000377047 CCDC97Q96F63 343 aaPredicted RBP15.73■□□□□ 0.11
GPC6-201ENST00000377047 MCM5P33992 734 aa15.73■□□□□ 0.11
GPC6-201ENST00000377047 HMG20BQ9P0W2 317 aa15.73■□□□□ 0.11
GPC6-201ENST00000377047 PPM1FP49593 454 aaPredicted RBP15.73■□□□□ 0.11
GPC6-201ENST00000377047 PANK2Q9BZ23 570 aa15.73■□□□□ 0.11
GPC6-201ENST00000377047 ASXL1Q8IXJ9 1541 aa15.73■□□□□ 0.11
GPC6-201ENST00000377047 KRT23Q9C075 422 aa15.73■□□□□ 0.11
GPC6-201ENST00000377047 RIMBP2O15034 1052 aa15.72■□□□□ 0.11
GPC6-201ENST00000377047 TCERG1LQ5VWI1 586 aa15.72■□□□□ 0.11
GPC6-201ENST00000377047 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.72■□□□□ 0.11
GPC6-201ENST00000377047 BTG4Q9NY30 223 aa15.72■□□□□ 0.11
GPC6-201ENST00000377047 ANAPC15P60006 121 aa15.72■□□□□ 0.11
GPC6-201ENST00000377047 DRC1Q96MC2 740 aa15.72■□□□□ 0.11
GPC6-201ENST00000377047 TFIP11Q9UBB9 837 aaKnown RBP15.72■□□□□ 0.11
GPC6-201ENST00000377047 BRPF3Q9ULD4 1205 aa15.72■□□□□ 0.11
GPC6-201ENST00000377047 PRKCSHP14314 528 aaPredicted RBP15.72■□□□□ 0.11
GPC6-201ENST00000377047 LEKR1Q6ZMV7 388 aa15.72■□□□□ 0.11
GPC6-201ENST00000377047 TRAPPC8Q9Y2L5 1435 aa15.72■□□□□ 0.11
GPC6-201ENST00000377047 ABCC1P33527 1531 aa15.72■□□□□ 0.11
GPC6-201ENST00000377047 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
GPC6-201ENST00000377047 MTIF2P46199 727 aaKnown RBP15.72■□□□□ 0.11
GPC6-201ENST00000377047 FLT4P35916 1363 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 ZFYP08048 801 aaPredicted RBP15.71■□□□□ 0.11
GPC6-201ENST00000377047 CCDC40Q4G0X9 1142 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 CKAP2LQ8IYA6 745 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 NUP88Q99567 741 aaPredicted RBP15.71■□□□□ 0.11
GPC6-201ENST00000377047 ZC3H12CQ9C0D7 883 aaKnown RBP15.71■□□□□ 0.11
GPC6-201ENST00000377047 TOP1P11387 765 aaKnown RBP15.71■□□□□ 0.11
GPC6-201ENST00000377047 UBA7P41226 1012 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 TDRD12Q587J7 1177 aaKnown RBP15.71■□□□□ 0.11
GPC6-201ENST00000377047 FERMT2Q96AC1 680 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 IL15P40933 162 aaPredicted RBP15.71■□□□□ 0.11
GPC6-201ENST00000377047 STXBP4Q6ZWJ1 553 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 BICD1Q96G01 975 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 KLF18A0A0U1RQI7 1052 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 ALDH1L1O75891 902 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 GCP02774 474 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 SFPQP23246 707 aaKnown RBP eCLIP15.71■□□□□ 0.111e-6■■□□□ 14.3
GPC6-201ENST00000377047 C8orf58Q8NAV2 365 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 VTI1AQ96AJ9 217 aa15.71■□□□□ 0.11
GPC6-201ENST00000377047 USP8P40818 1118 aa15.71■□□□□ 0.1
GPC6-201ENST00000377047 CETN1Q12798 172 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms