RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 COL4A5P29400 1685 aa22.96■■□□□ 1.27
HLA-A-201ENST00000376802 ADAMTSL1Q8N6G6 1762 aa22.96■■□□□ 1.27
HLA-A-201ENST00000376802 PROSER3Q2NL68 480 aa22.96■■□□□ 1.27
HLA-A-201ENST00000376802 C3orf67Q6ZVT6 689 aa22.96■■□□□ 1.27
HLA-A-201ENST00000376802 CREBZFQ9NS37 354 aa22.96■■□□□ 1.27
HLA-A-201ENST00000376802 BABAM1Q9NWV8 329 aa22.96■■□□□ 1.27
HLA-A-201ENST00000376802 LDHDQ86WU2 507 aa22.95■■□□□ 1.26
HLA-A-201ENST00000376802 PASKQ96RG2 1323 aa22.95■■□□□ 1.26
HLA-A-201ENST00000376802 ANXA1P04083 346 aa22.94■■□□□ 1.26
HLA-A-201ENST00000376802 EIF2S2P20042 333 aaKnown RBP22.94■■□□□ 1.26
HLA-A-201ENST00000376802 RPGRQ92834 1020 aaKnown RBP22.94■■□□□ 1.26
HLA-A-201ENST00000376802 CRAMP1Q96RY5 1269 aa22.94■■□□□ 1.26
HLA-A-201ENST00000376802 ANKRD36CQ5JPF3 1778 aa22.93■■□□□ 1.26
HLA-A-201ENST00000376802 CC2D2BQ6DHV5 1058 aa22.93■■□□□ 1.26
HLA-A-201ENST00000376802 ITGBL1O95965 494 aaPredicted RBP22.92■■□□□ 1.26
HLA-A-201ENST00000376802 PARP10Q53GL7 1025 aa22.92■■□□□ 1.26
HLA-A-201ENST00000376802 HACL1Q9UJ83 578 aa22.92■■□□□ 1.26
HLA-A-201ENST00000376802 LAMB2P55268 1798 aa22.91■■□□□ 1.26
HLA-A-201ENST00000376802 HSPA1AP0DMV8 641 aaKnown RBP22.91■■□□□ 1.26
HLA-A-201ENST00000376802 HSPA1BP0DMV9 641 aaKnown RBP22.91■■□□□ 1.26
HLA-A-201ENST00000376802 SLC10A5Q5PT55 438 aa22.91■■□□□ 1.26
HLA-A-201ENST00000376802 PPP1R42Q7Z4L9 355 aa22.91■■□□□ 1.26
HLA-A-201ENST00000376802 RBM17Q96I25 401 aaKnown RBP22.91■■□□□ 1.26
HLA-A-201ENST00000376802 RNF123Q5XPI4 1314 aa22.91■■□□□ 1.26
HLA-A-201ENST00000376802 EPHX2P34913 555 aa22.9■■□□□ 1.26
HLA-A-201ENST00000376802 LMOD3Q0VAK6 560 aa22.9■■□□□ 1.26
HLA-A-201ENST00000376802 DDX10Q13206 875 aaKnown RBP22.9■■□□□ 1.26
HLA-A-201ENST00000376802 LTBP1Q14766 1721 aa22.9■■□□□ 1.26
HLA-A-201ENST00000376802 EAPPQ56P03 285 aaPredicted RBP22.9■■□□□ 1.26
HLA-A-201ENST00000376802 GPC2Q8N158 579 aa22.9■■□□□ 1.26
HLA-A-201ENST00000376802 MKRN1Q9UHC7 482 aaKnown RBP22.9■■□□□ 1.26
HLA-A-201ENST00000376802 MYBBP1AQ9BQG0 1328 aaKnown RBP22.9■■□□□ 1.26
HLA-A-201ENST00000376802 CHL1O00533 1208 aa22.89■■□□□ 1.26
HLA-A-201ENST00000376802 GRIPAP1Q4V328 841 aa22.89■■□□□ 1.26
HLA-A-201ENST00000376802 CCDC146Q8IYE0 955 aa22.89■■□□□ 1.26
HLA-A-201ENST00000376802 JDP2Q8WYK2 163 aa22.89■■□□□ 1.26
HLA-A-201ENST00000376802 PPEF1O14829 653 aaPredicted RBP22.88■■□□□ 1.25
HLA-A-201ENST00000376802 KRT24Q2M2I5 525 aa22.88■■□□□ 1.25
HLA-A-201ENST00000376802 COPS6Q7L5N1 327 aa22.88■■□□□ 1.25
HLA-A-201ENST00000376802 NECTIN2Q92692 538 aa22.88■■□□□ 1.25
HLA-A-201ENST00000376802 NLRP3Q96P20 1036 aa22.88■■□□□ 1.25
HLA-A-201ENST00000376802 UTP14AQ9BVJ6 771 aaKnown RBP22.88■■□□□ 1.25
HLA-A-201ENST00000376802 TRIM35Q9UPQ4 493 aa22.88■■□□□ 1.25
HLA-A-201ENST00000376802 TCERG1O14776 1098 aaKnown RBP22.87■■□□□ 1.25
HLA-A-201ENST00000376802 NEUROD2Q15784 382 aa22.87■■□□□ 1.25
HLA-A-201ENST00000376802 PNMA8AQ86V59 439 aaPredicted RBP22.86■■□□□ 1.25
HLA-A-201ENST00000376802 NLRP10Q86W26 655 aa22.86■■□□□ 1.25
HLA-A-201ENST00000376802 XAGE3Q8WTP9 111 aa22.86■■□□□ 1.25
HLA-A-201ENST00000376802 CNTNAP1P78357 1384 aa22.86■■□□□ 1.25
HLA-A-201ENST00000376802 TAF1P21675 1872 aa22.86■■□□□ 1.25
HLA-A-201ENST00000376802 AIMP1Q12904 312 aaKnown RBP22.85■■□□□ 1.25
HLA-A-201ENST00000376802 RUNDC1Q96C34 613 aa22.85■■□□□ 1.25
HLA-A-201ENST00000376802 EIF6P56537 245 aaKnown RBP22.84■■□□□ 1.25
HLA-A-201ENST00000376802 LARGE2Q8N3Y3 721 aa22.84■■□□□ 1.25
HLA-A-201ENST00000376802 DDX21Q9NR30 783 aaKnown RBP eCLIP22.84■■□□□ 1.25
HLA-A-201ENST00000376802 CLEC11AQ9Y240 323 aa22.84■■□□□ 1.25
HLA-A-201ENST00000376802 ATP6V0A2Q9Y487 856 aa22.84■■□□□ 1.25
HLA-A-201ENST00000376802 TMEM88BA6NKF7 163 aa22.83■■□□□ 1.25
HLA-A-201ENST00000376802 MAP1SQ66K74 1059 aaPredicted RBP22.83■■□□□ 1.25
HLA-A-201ENST00000376802 CNTROBQ8N137 903 aa22.83■■□□□ 1.25
HLA-A-201ENST00000376802 GJA3Q9Y6H8 435 aa22.83■■□□□ 1.25
HLA-A-201ENST00000376802 SCNN1DP51172 638 aa22.82■■□□□ 1.24
HLA-A-201ENST00000376802 TCIRG1Q13488 830 aa22.82■■□□□ 1.24
HLA-A-201ENST00000376802 TNS4Q8IZW8 715 aa22.82■■□□□ 1.24
HLA-A-201ENST00000376802 ADAMTS8Q9UP79 889 aa22.82■■□□□ 1.24
HLA-A-201ENST00000376802 ABCC4O15439 1325 aa22.82■■□□□ 1.24
HLA-A-201ENST00000376802 HCLS1P14317 486 aaPredicted RBP22.82■■□□□ 1.24
HLA-A-201ENST00000376802 EPS15P42566 896 aa22.82■■□□□ 1.24
HLA-A-201ENST00000376802 HSP90AB3PQ58FF7 597 aa22.82■■□□□ 1.24
HLA-A-201ENST00000376802 AOC3Q16853 763 aa22.81■■□□□ 1.24
HLA-A-201ENST00000376802 RTFDC1Q9BY42 306 aaPredicted RBP22.81■■□□□ 1.24
HLA-A-201ENST00000376802 VPS33BQ9H267 617 aa22.81■■□□□ 1.24
HLA-A-201ENST00000376802 CHPF2Q9P2E5 772 aa22.81■■□□□ 1.24
HLA-A-201ENST00000376802 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
HLA-A-201ENST00000376802 DDX60Q8IY21 1712 aaKnown RBP22.8■■□□□ 1.24
HLA-A-201ENST00000376802 BBOX1O75936 387 aa22.8■■□□□ 1.24
HLA-A-201ENST00000376802 VEGFBP49765 207 aa22.8■■□□□ 1.24
HLA-A-201ENST00000376802 NIM1KQ8IY84 436 aa22.8■■□□□ 1.24
HLA-A-201ENST00000376802 TRMT112Q9UI30 125 aaKnown RBP22.8■■□□□ 1.24
HLA-A-201ENST00000376802 PPIP5K2O43314 1243 aa22.79■■□□□ 1.24
HLA-A-201ENST00000376802 WDR43Q15061 677 aaKnown RBP eCLIP22.79■■□□□ 1.24
HLA-A-201ENST00000376802 SP8Q8IXZ3 490 aa22.79■■□□□ 1.24
HLA-A-201ENST00000376802 SH3TC1Q8TE82 1336 aa22.78■■□□□ 1.24
HLA-A-201ENST00000376802 LMOD1P29536 600 aaPredicted RBP22.78■■□□□ 1.24
HLA-A-201ENST00000376802 ZNF428Q96B54 188 aa22.78■■□□□ 1.24
HLA-A-201ENST00000376802 HOXB7P09629 217 aa22.77■■□□□ 1.24
HLA-A-201ENST00000376802 HDGFL1Q5TGJ6 251 aa22.77■■□□□ 1.24
HLA-A-201ENST00000376802 PLBD2Q8NHP8 589 aa22.77■■□□□ 1.24
HLA-A-201ENST00000376802 TMX4Q9H1E5 349 aaPredicted RBP22.77■■□□□ 1.24
HLA-A-201ENST00000376802 LRRC37AA6NMS7 1700 aa22.76■■□□□ 1.23
HLA-A-201ENST00000376802 FOXN1O15353 648 aa22.76■■□□□ 1.23
HLA-A-201ENST00000376802 CXCL9Q07325 125 aa22.76■■□□□ 1.23
HLA-A-201ENST00000376802 CFAP44Q96MT7 982 aa22.76■■□□□ 1.23
HLA-A-201ENST00000376802 TRPM7Q96QT4 1865 aa22.75■■□□□ 1.23
HLA-A-201ENST00000376802 RASSF10A6NK89 507 aa22.75■■□□□ 1.23
HLA-A-201ENST00000376802 FMR1Q06787 632 aaKnown RBP eCLIP22.75■■□□□ 1.23
HLA-A-201ENST00000376802 DPP8Q6V1X1 898 aaPredicted RBP22.75■■□□□ 1.23
HLA-A-201ENST00000376802 ANKRD13DQ6ZTN6 518 aa22.75■■□□□ 1.23
HLA-A-201ENST00000376802 MPNDQ8N594 471 aa22.75■■□□□ 1.23
HLA-A-201ENST00000376802 SUPT20HQ8NEM7 779 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 291.6 ms