RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CYP2E1P05181 493 aaPredicted RBP24.46■■□□□ 1.51
VSX1-202ENST00000376709 ARXQ96QS3 562 aa24.46■■□□□ 1.51
VSX1-202ENST00000376709 TLR7Q9NYK1 1049 aaKnown RBP24.46■■□□□ 1.51
VSX1-202ENST00000376709 GOLGA6L3A6NEY3 463 aa24.46■■□□□ 1.51
VSX1-202ENST00000376709 COPRSQ9NQ92 184 aa24.46■■□□□ 1.51
VSX1-202ENST00000376709 DISP2A7MBM2 1401 aa24.45■■□□□ 1.5
VSX1-202ENST00000376709 A1BGP04217 495 aa24.45■■□□□ 1.5
VSX1-202ENST00000376709 RTN4Q9NQC3 1192 aaKnown RBP24.45■■□□□ 1.5
VSX1-202ENST00000376709 COL15A1P39059 1388 aa24.45■■□□□ 1.5
VSX1-202ENST00000376709 RABL6Q3YEC7 729 aaPredicted RBP24.44■■□□□ 1.5
VSX1-202ENST00000376709 PTPN12Q05209 780 aaKnown RBP24.43■■□□□ 1.5
VSX1-202ENST00000376709 TTLL7Q6ZT98 887 aa24.43■■□□□ 1.5
VSX1-202ENST00000376709 SNX14Q9Y5W7 946 aa24.43■■□□□ 1.5
VSX1-202ENST00000376709 CUL4AQ13619 759 aa24.43■■□□□ 1.5
VSX1-202ENST00000376709 HIP1O00291 1037 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 RFX5P48382 616 aaPredicted RBP24.42■■□□□ 1.5
VSX1-202ENST00000376709 PIGBQ92521 554 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 BOLA2Q9H3K6 86 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 PHLPP1O60346 1717 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 ADAMTS2O95450 1211 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 NUP188Q5SRE5 1749 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 ASAP1Q9ULH1 1129 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 CASP7P55210 303 aa24.41■■□□□ 1.5
VSX1-202ENST00000376709 CWC25Q9NXE8 425 aaPredicted RBP24.41■■□□□ 1.5
VSX1-202ENST00000376709 FSD2A1L4K1 749 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 MCTP1Q6DN14 999 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 INTS4Q96HW7 963 aaKnown RBP24.4■■□□□ 1.5
VSX1-202ENST00000376709 RASEFQ8IZ41 740 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 FSD1Q9BTV5 496 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 ZBTB3Q9H5J0 574 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 CHMP3Q9Y3E7 222 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 TFCP2Q12800 502 aa24.39■■□□□ 1.5
VSX1-202ENST00000376709 LMBR1LQ6UX01 489 aa24.39■■□□□ 1.5
VSX1-202ENST00000376709 PLCH1Q4KWH8 1693 aa24.39■■□□□ 1.5
VSX1-202ENST00000376709 PTH1RQ03431 593 aa24.39■■□□□ 1.49
VSX1-202ENST00000376709 TNNI3KQ59H18 835 aa24.39■■□□□ 1.49
VSX1-202ENST00000376709 FPGT-TNNI3KV9GXZ4 949 aa24.39■■□□□ 1.49
VSX1-202ENST00000376709 H7C1W4 665 aa24.38■■□□□ 1.49
VSX1-202ENST00000376709 ZDHHC9Q9Y397 364 aa24.38■■□□□ 1.49
VSX1-202ENST00000376709 NMIQ13287 307 aaPredicted RBP24.37■■□□□ 1.49
VSX1-202ENST00000376709 FAM227BQ96M60 508 aa24.37■■□□□ 1.49
VSX1-202ENST00000376709 ATG3Q9NT62 314 aa24.37■■□□□ 1.49
VSX1-202ENST00000376709 DDX49Q9Y6V7 483 aaKnown RBP24.37■■□□□ 1.49
VSX1-202ENST00000376709 ITGB4P16144 1822 aa24.36■■□□□ 1.49
VSX1-202ENST00000376709 CCDC171Q6TFL3 1326 aa24.36■■□□□ 1.49
VSX1-202ENST00000376709 PIP4K2BP78356 416 aa24.36■■□□□ 1.49
VSX1-202ENST00000376709 DBNLQ9UJU6 430 aaKnown RBP24.36■■□□□ 1.49
VSX1-202ENST00000376709 EXOC5O00471 708 aa24.36■■□□□ 1.49
VSX1-202ENST00000376709 FOXO4P98177 505 aa24.36■■□□□ 1.49
VSX1-202ENST00000376709 PRPF40BQ6NWY9 871 aaKnown RBP24.36■■□□□ 1.49
VSX1-202ENST00000376709 CASTP20810 708 aaKnown RBP24.35■■□□□ 1.49
VSX1-202ENST00000376709 CCDC191Q8NCU4 936 aa24.35■■□□□ 1.49
VSX1-202ENST00000376709 ZNF330Q9Y3S2 320 aaPredicted RBP24.35■■□□□ 1.49
VSX1-202ENST00000376709 TJP1Q07157 1748 aa24.35■■□□□ 1.49
VSX1-202ENST00000376709 XRCC6P12956 609 aaKnown RBP eCLIP24.35■■□□□ 1.49
VSX1-202ENST00000376709 KCNJ4P48050 445 aa24.35■■□□□ 1.49
VSX1-202ENST00000376709 DNAJC10Q8IXB1 793 aa24.35■■□□□ 1.49
VSX1-202ENST00000376709 KLHL40Q2TBA0 621 aa24.34■■□□□ 1.49
VSX1-202ENST00000376709 TTC14Q96N46 770 aa24.34■■□□□ 1.49
VSX1-202ENST00000376709 WNK3Q9BYP7 1800 aa24.34■■□□□ 1.49
VSX1-202ENST00000376709 NUTM2BA6NNL0 878 aaPredicted RBP24.33■■□□□ 1.49
VSX1-202ENST00000376709 NUTM2EB1AL46 878 aaPredicted RBP24.33■■□□□ 1.49
VSX1-202ENST00000376709 ATP5JP18859 108 aa24.33■■□□□ 1.49
VSX1-202ENST00000376709 AK2P54819 239 aa24.33■■□□□ 1.49
VSX1-202ENST00000376709 FOXD4L5Q5VV16 416 aaPredicted RBP24.33■■□□□ 1.49
VSX1-202ENST00000376709 NUTM2AQ8IVF1 878 aaPredicted RBP24.33■■□□□ 1.49
VSX1-202ENST00000376709 FOXD4L4Q8WXT5 416 aaPredicted RBP24.33■■□□□ 1.49
VSX1-202ENST00000376709 ZKSCAN1P17029 563 aaPredicted RBP24.33■■□□□ 1.48
VSX1-202ENST00000376709 ISY1Q9ULR0 285 aaKnown RBP24.33■■□□□ 1.48
VSX1-202ENST00000376709 A0A0D9SFI3 127 aa24.32■■□□□ 1.48
VSX1-202ENST00000376709 JAKMIP1Q96N16 626 aaKnown RBP24.32■■□□□ 1.48
VSX1-202ENST00000376709 BCL9O00512 1426 aa24.32■■□□□ 1.48
VSX1-202ENST00000376709 RBM8AQ9Y5S9 174 aaKnown RBP24.32■■□□□ 1.48
VSX1-202ENST00000376709 MRE11P49959 708 aa24.31■■□□□ 1.48
VSX1-202ENST00000376709 NECTIN1Q15223 517 aa24.31■■□□□ 1.48
VSX1-202ENST00000376709 VSIG10Q8N0Z9 540 aa24.31■■□□□ 1.48
VSX1-202ENST00000376709 SYTL4Q96C24 671 aaPredicted RBP24.31■■□□□ 1.48
VSX1-202ENST00000376709 TEX13AQ9BXU3 409 aaPredicted RBP24.31■■□□□ 1.48
VSX1-202ENST00000376709 LIMCH1Q9UPQ0 1083 aa24.31■■□□□ 1.48
VSX1-202ENST00000376709 NRAPQ86VF7 1730 aa24.31■■□□□ 1.48
VSX1-202ENST00000376709 BRD1O95696 1058 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 MAP4K1Q92918 833 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 EDC3Q96F86 508 aaKnown RBP24.3■■□□□ 1.48
VSX1-202ENST00000376709 DBNDD2Q9BQY9 259 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 LMBRD1Q9NUN5 540 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 LRP6O75581 1613 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 CPA1P15085 419 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 PANK2Q9BZ23 570 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 SNRKQ9NRH2 765 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 SPATA31A1Q5TZJ5 1347 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 ADCK5Q3MIX3 580 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 KCNB2Q92953 911 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 CYP46A1Q9Y6A2 500 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 KAT6BQ8WYB5 2073 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 CREB3L3Q68CJ9 461 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 RUFY3Q7L099 469 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 DNAJC2Q99543 621 aaKnown RBP24.29■■□□□ 1.48
VSX1-202ENST00000376709 TM6SF1Q9BZW5 370 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 PRPF40AO75400 957 aaKnown RBP24.28■■□□□ 1.48
VSX1-202ENST00000376709 STARD3NLO95772 234 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms