RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CYP2E1P05181 493 aaPredicted RBP24.46■■□□□ 1.51
VSX1-202ENST00000376709 ARXQ96QS3 562 aa24.46■■□□□ 1.51
VSX1-202ENST00000376709 TLR7Q9NYK1 1049 aaKnown RBP24.46■■□□□ 1.51
VSX1-202ENST00000376709 GOLGA6L3A6NEY3 463 aa24.46■■□□□ 1.51
VSX1-202ENST00000376709 COPRSQ9NQ92 184 aa24.46■■□□□ 1.51
VSX1-202ENST00000376709 DISP2A7MBM2 1401 aa24.45■■□□□ 1.5
VSX1-202ENST00000376709 A1BGP04217 495 aa24.45■■□□□ 1.5
VSX1-202ENST00000376709 RTN4Q9NQC3 1192 aaKnown RBP24.45■■□□□ 1.5
VSX1-202ENST00000376709 COL15A1P39059 1388 aa24.45■■□□□ 1.5
VSX1-202ENST00000376709 RABL6Q3YEC7 729 aaPredicted RBP24.44■■□□□ 1.5
VSX1-202ENST00000376709 PTPN12Q05209 780 aaKnown RBP24.43■■□□□ 1.5
VSX1-202ENST00000376709 TTLL7Q6ZT98 887 aa24.43■■□□□ 1.5
VSX1-202ENST00000376709 SNX14Q9Y5W7 946 aa24.43■■□□□ 1.5
VSX1-202ENST00000376709 CUL4AQ13619 759 aa24.43■■□□□ 1.5
VSX1-202ENST00000376709 HIP1O00291 1037 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 RFX5P48382 616 aaPredicted RBP24.42■■□□□ 1.5
VSX1-202ENST00000376709 PIGBQ92521 554 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 BOLA2Q9H3K6 86 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 PHLPP1O60346 1717 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 ADAMTS2O95450 1211 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 NUP188Q5SRE5 1749 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 ASAP1Q9ULH1 1129 aa24.42■■□□□ 1.5
VSX1-202ENST00000376709 CASP7P55210 303 aa24.41■■□□□ 1.5
VSX1-202ENST00000376709 CWC25Q9NXE8 425 aaPredicted RBP24.41■■□□□ 1.5
VSX1-202ENST00000376709 FSD2A1L4K1 749 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 MCTP1Q6DN14 999 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 INTS4Q96HW7 963 aaKnown RBP24.4■■□□□ 1.5
VSX1-202ENST00000376709 RASEFQ8IZ41 740 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 FSD1Q9BTV5 496 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 ZBTB3Q9H5J0 574 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 CHMP3Q9Y3E7 222 aa24.4■■□□□ 1.5
VSX1-202ENST00000376709 TFCP2Q12800 502 aa24.39■■□□□ 1.5
VSX1-202ENST00000376709 LMBR1LQ6UX01 489 aa24.39■■□□□ 1.5
VSX1-202ENST00000376709 PLCH1Q4KWH8 1693 aa24.39■■□□□ 1.5
VSX1-202ENST00000376709 PTH1RQ03431 593 aa24.39■■□□□ 1.49
VSX1-202ENST00000376709 TNNI3KQ59H18 835 aa24.39■■□□□ 1.49
VSX1-202ENST00000376709 FPGT-TNNI3KV9GXZ4 949 aa24.39■■□□□ 1.49
VSX1-202ENST00000376709 H7C1W4 665 aa24.38■■□□□ 1.49
VSX1-202ENST00000376709 ZDHHC9Q9Y397 364 aa24.38■■□□□ 1.49
VSX1-202ENST00000376709 NMIQ13287 307 aaPredicted RBP24.37■■□□□ 1.49
VSX1-202ENST00000376709 FAM227BQ96M60 508 aa24.37■■□□□ 1.49
VSX1-202ENST00000376709 ATG3Q9NT62 314 aa24.37■■□□□ 1.49
VSX1-202ENST00000376709 DDX49Q9Y6V7 483 aaKnown RBP24.37■■□□□ 1.49
VSX1-202ENST00000376709 ITGB4P16144 1822 aa24.36■■□□□ 1.49
VSX1-202ENST00000376709 CCDC171Q6TFL3 1326 aa24.36■■□□□ 1.49
VSX1-202ENST00000376709 PIP4K2BP78356 416 aa24.36■■□□□ 1.49
VSX1-202ENST00000376709 DBNLQ9UJU6 430 aaKnown RBP24.36■■□□□ 1.49
VSX1-202ENST00000376709 EXOC5O00471 708 aa24.36■■□□□ 1.49
VSX1-202ENST00000376709 FOXO4P98177 505 aa24.36■■□□□ 1.49
VSX1-202ENST00000376709 PRPF40BQ6NWY9 871 aaKnown RBP24.36■■□□□ 1.49
VSX1-202ENST00000376709 CASTP20810 708 aaKnown RBP24.35■■□□□ 1.49
VSX1-202ENST00000376709 CCDC191Q8NCU4 936 aa24.35■■□□□ 1.49
VSX1-202ENST00000376709 ZNF330Q9Y3S2 320 aaPredicted RBP24.35■■□□□ 1.49
VSX1-202ENST00000376709 TJP1Q07157 1748 aa24.35■■□□□ 1.49
VSX1-202ENST00000376709 XRCC6P12956 609 aaKnown RBP eCLIP24.35■■□□□ 1.49
VSX1-202ENST00000376709 KCNJ4P48050 445 aa24.35■■□□□ 1.49
VSX1-202ENST00000376709 DNAJC10Q8IXB1 793 aa24.35■■□□□ 1.49
VSX1-202ENST00000376709 KLHL40Q2TBA0 621 aa24.34■■□□□ 1.49
VSX1-202ENST00000376709 TTC14Q96N46 770 aa24.34■■□□□ 1.49
VSX1-202ENST00000376709 WNK3Q9BYP7 1800 aa24.34■■□□□ 1.49
VSX1-202ENST00000376709 NUTM2BA6NNL0 878 aaPredicted RBP24.33■■□□□ 1.49
VSX1-202ENST00000376709 NUTM2EB1AL46 878 aaPredicted RBP24.33■■□□□ 1.49
VSX1-202ENST00000376709 ATP5JP18859 108 aa24.33■■□□□ 1.49
VSX1-202ENST00000376709 AK2P54819 239 aa24.33■■□□□ 1.49
VSX1-202ENST00000376709 FOXD4L5Q5VV16 416 aaPredicted RBP24.33■■□□□ 1.49
VSX1-202ENST00000376709 NUTM2AQ8IVF1 878 aaPredicted RBP24.33■■□□□ 1.49
VSX1-202ENST00000376709 FOXD4L4Q8WXT5 416 aaPredicted RBP24.33■■□□□ 1.49
VSX1-202ENST00000376709 ZKSCAN1P17029 563 aaPredicted RBP24.33■■□□□ 1.48
VSX1-202ENST00000376709 ISY1Q9ULR0 285 aaKnown RBP24.33■■□□□ 1.48
VSX1-202ENST00000376709 A0A0D9SFI3 127 aa24.32■■□□□ 1.48
VSX1-202ENST00000376709 JAKMIP1Q96N16 626 aaKnown RBP24.32■■□□□ 1.48
VSX1-202ENST00000376709 BCL9O00512 1426 aa24.32■■□□□ 1.48
VSX1-202ENST00000376709 RBM8AQ9Y5S9 174 aaKnown RBP24.32■■□□□ 1.48
VSX1-202ENST00000376709 MRE11P49959 708 aa24.31■■□□□ 1.48
VSX1-202ENST00000376709 NECTIN1Q15223 517 aa24.31■■□□□ 1.48
VSX1-202ENST00000376709 VSIG10Q8N0Z9 540 aa24.31■■□□□ 1.48
VSX1-202ENST00000376709 SYTL4Q96C24 671 aaPredicted RBP24.31■■□□□ 1.48
VSX1-202ENST00000376709 TEX13AQ9BXU3 409 aaPredicted RBP24.31■■□□□ 1.48
VSX1-202ENST00000376709 LIMCH1Q9UPQ0 1083 aa24.31■■□□□ 1.48
VSX1-202ENST00000376709 NRAPQ86VF7 1730 aa24.31■■□□□ 1.48
VSX1-202ENST00000376709 BRD1O95696 1058 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 MAP4K1Q92918 833 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 EDC3Q96F86 508 aaKnown RBP24.3■■□□□ 1.48
VSX1-202ENST00000376709 DBNDD2Q9BQY9 259 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 LMBRD1Q9NUN5 540 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 LRP6O75581 1613 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 CPA1P15085 419 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 PANK2Q9BZ23 570 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 SNRKQ9NRH2 765 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 SPATA31A1Q5TZJ5 1347 aa24.3■■□□□ 1.48
VSX1-202ENST00000376709 ADCK5Q3MIX3 580 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 KCNB2Q92953 911 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 CYP46A1Q9Y6A2 500 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 KAT6BQ8WYB5 2073 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 CREB3L3Q68CJ9 461 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 RUFY3Q7L099 469 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 DNAJC2Q99543 621 aaKnown RBP24.29■■□□□ 1.48
VSX1-202ENST00000376709 TM6SF1Q9BZW5 370 aa24.29■■□□□ 1.48
VSX1-202ENST00000376709 PRPF40AO75400 957 aaKnown RBP24.28■■□□□ 1.48
VSX1-202ENST00000376709 STARD3NLO95772 234 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms