RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 STK38Q15208 465 aa16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 OTUD7BQ6GQQ9 843 aa16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 SH2B1Q9NRF2 756 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 KIAA0232Q92628 1395 aa16.97■□□□□ 0.31
TNFRSF1B-201ENST00000376259 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
TNFRSF1B-201ENST00000376259 Q6ZUG5 572 aa16.97■□□□□ 0.31
TNFRSF1B-201ENST00000376259 CCDC144CPQ8IYA2 1237 aa16.97■□□□□ 0.31
TNFRSF1B-201ENST00000376259 DDX17Q92841 729 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1B-201ENST00000376259 EIF4A1P60842 406 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1B-201ENST00000376259 ORAI2Q96SN7 254 aa16.97■□□□□ 0.31
TNFRSF1B-201ENST00000376259 TNNT1P13805 278 aa16.97■□□□□ 0.31
TNFRSF1B-201ENST00000376259 TIMM10P62072 90 aa16.97■□□□□ 0.31
TNFRSF1B-201ENST00000376259 PTPRMP28827 1452 aa16.97■□□□□ 0.31
TNFRSF1B-201ENST00000376259 CAMSAP1Q5T5Y3 1602 aa16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 KSR2Q6VAB6 950 aa16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 TTC6Q86TZ1 520 aa16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 PROSER2Q86WR7 435 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 OSBPL3Q9H4L5 887 aa16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 RALYLQ86SE5 291 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 CCDC112Q8NEF3 446 aa16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 NEK1Q96PY6 1258 aa16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 STRN4Q9NRL3 753 aa16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 ATP10DQ9P241 1426 aa16.96■□□□□ 0.31
TNFRSF1B-201ENST00000376259 DYNC1I1O14576 645 aa16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 RRP12Q5JTH9 1297 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 NFXL1Q6ZNB6 911 aa16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 LSG1Q9H089 658 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 PYCARDQ9ULZ3 195 aa16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 MTMR6Q9Y217 621 aa16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 A0A0U1RQG5 324 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 CUL4AQ13619 759 aa16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 NRBP1Q9UHY1 535 aa16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 HIP1O00291 1037 aa16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 CABP4P57796 275 aa16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 APOBRQ0VD83 1088 aa16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 TFCP2Q12800 502 aa16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 FTOQ9C0B1 505 aaKnown RBP eCLIP16.95■□□□□ 0.3
TNFRSF1B-201ENST00000376259 PLEKHG3A1L390 1219 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 SLC27A2O14975 620 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 MAPK8IP2Q13387 824 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 ANKRD1Q15327 319 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 BEND3Q5T5X7 828 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 LMBR1LQ6UX01 489 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 PDILTQ8N807 584 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 SCAND2PQ9GZW5 306 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 PI4K2BQ8TCG2 481 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 DBNDD2Q9BQY9 259 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 CPS1P31327 1500 aa16.94■□□□□ 0.3
TNFRSF1B-201ENST00000376259 TULP1O00294 542 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 HS1BP3Q53T59 392 aa16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 MED14O60244 1454 aa16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 MCM5P33992 734 aa16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 FSIP1Q8NA03 581 aa16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 NCOA3Q9Y6Q9 1424 aa16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 TTC21AQ8NDW8 1320 aa16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 CD163L1Q9NR16 1453 aa16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 SBNO1A3KN83 1393 aa16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 AATKQ6ZMQ8 1374 aa16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 FAM200AQ8TCP9 573 aa16.93■□□□□ 0.3
TNFRSF1B-201ENST00000376259 RXRAP19793 462 aa16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 TTLL5Q6EMB2 1281 aa16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 ANKRD13DQ6ZTN6 518 aa16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 CCAR1Q8IX12 1150 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 INO80Q9ULG1 1556 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 RIOK3O14730 519 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 ZNF500O60304 480 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 ZNF589Q86UQ0 364 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 NRXN1Q9ULB1 1477 aa16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 SHPRHQ149N8 1683 aa16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 VPS53Q5VIR6 699 aa16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 TAF6LQ9Y6J9 622 aa16.92■□□□□ 0.3
TNFRSF1B-201ENST00000376259 ARHGEF40Q8TER5 1519 aa16.91■□□□□ 0.3
TNFRSF1B-201ENST00000376259 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1B-201ENST00000376259 GCP02774 474 aa16.91■□□□□ 0.3
TNFRSF1B-201ENST00000376259 U2AF2P26368 475 aaKnown RBP eCLIP16.91■□□□□ 0.3
TNFRSF1B-201ENST00000376259 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
TNFRSF1B-201ENST00000376259 LINS1Q8NG48 757 aa16.91■□□□□ 0.3
TNFRSF1B-201ENST00000376259 STAP2Q9UGK3 403 aa16.91■□□□□ 0.3
TNFRSF1B-201ENST00000376259 COL3A1P02461 1466 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1B-201ENST00000376259 SETBP1Q9Y6X0 1596 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 PES1O00541 588 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 NR1I2O75469 434 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 TRDNQ13061 729 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 MTMR7Q9Y216 660 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 NEXMIFQ5QGS0 1516 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 HECW2Q9P2P5 1572 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 ALKQ9UM73 1620 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 IFIT1P09914 478 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 RNMTO43148 476 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 IDH1O75874 414 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 TPM4P67936 248 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 UVSSAQ2YD98 709 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 PIBF1Q8WXW3 757 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 CBX8Q9HC52 389 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 CFAP45Q9UL16 551 aa16.9■□□□□ 0.3
TNFRSF1B-201ENST00000376259 CDK12Q9NYV4 1490 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms