RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 CRAMP1Q96RY5 1269 aa30.5■■■□□ 2.47
C9orf47-202ENST00000375850 ZNF541Q9H0D2 1346 aa30.49■■■□□ 2.47
C9orf47-202ENST00000375850 SNED1Q8TER0 1413 aa30.49■■■□□ 2.47
C9orf47-202ENST00000375850 GPTP24298 496 aa30.49■■■□□ 2.47
C9orf47-202ENST00000375850 RIPK4P57078 832 aa30.49■■■□□ 2.47
C9orf47-202ENST00000375850 GPC2Q8N158 579 aa30.49■■■□□ 2.47
C9orf47-202ENST00000375850 RBM17Q96I25 401 aaKnown RBP30.49■■■□□ 2.47
C9orf47-202ENST00000375850 HSPA1AP0DMV8 641 aaKnown RBP30.48■■■□□ 2.47
C9orf47-202ENST00000375850 HSPA1BP0DMV9 641 aaKnown RBP30.48■■■□□ 2.47
C9orf47-202ENST00000375850 SUSD4Q5VX71 490 aa30.48■■■□□ 2.47
C9orf47-202ENST00000375850 PASKQ96RG2 1323 aa30.47■■■□□ 2.47
C9orf47-202ENST00000375850 NTSR2O95665 410 aa30.47■■■□□ 2.47
C9orf47-202ENST00000375850 NUP98P52948 1817 aa30.47■■■□□ 2.47
C9orf47-202ENST00000375850 RNF123Q5XPI4 1314 aa30.47■■■□□ 2.47
C9orf47-202ENST00000375850 EPHX2P34913 555 aa30.46■■■□□ 2.47
C9orf47-202ENST00000375850 EIF6P56537 245 aaKnown RBP30.45■■■□□ 2.47
C9orf47-202ENST00000375850 TMX4Q9H1E5 349 aaPredicted RBP30.45■■■□□ 2.47
C9orf47-202ENST00000375850 EAPPQ56P03 285 aaPredicted RBP30.44■■■□□ 2.46
C9orf47-202ENST00000375850 NLRP3Q96P20 1036 aa30.44■■■□□ 2.46
C9orf47-202ENST00000375850 TMPOP42166 694 aaKnown RBP30.43■■■□□ 2.46
C9orf47-202ENST00000375850 HSP90AB3PQ58FF7 597 aa30.43■■■□□ 2.46
C9orf47-202ENST00000375850 LRP10Q7Z4F1 713 aa30.43■■■□□ 2.46
C9orf47-202ENST00000375850 PPEF1O14829 653 aaPredicted RBP30.42■■■□□ 2.46
C9orf47-202ENST00000375850 EIF2S2P20042 333 aaKnown RBP30.42■■■□□ 2.46
C9orf47-202ENST00000375850 PDIA6Q15084 440 aa30.42■■■□□ 2.46
C9orf47-202ENST00000375850 SLC10A5Q5PT55 438 aa30.42■■■□□ 2.46
C9orf47-202ENST00000375850 TNS4Q8IZW8 715 aa30.42■■■□□ 2.46
C9orf47-202ENST00000375850 UTP14AQ9BVJ6 771 aaKnown RBP30.42■■■□□ 2.46
C9orf47-202ENST00000375850 VPS33BQ9H267 617 aa30.42■■■□□ 2.46
C9orf47-202ENST00000375850 CNTNAP1P78357 1384 aa30.41■■■□□ 2.46
C9orf47-202ENST00000375850 TMEM88BA6NKF7 163 aa30.41■■■□□ 2.46
C9orf47-202ENST00000375850 ITGBL1O95965 494 aaPredicted RBP30.41■■■□□ 2.46
C9orf47-202ENST00000375850 MKRN1Q9UHC7 482 aaKnown RBP30.41■■■□□ 2.46
C9orf47-202ENST00000375850 CLEC11AQ9Y240 323 aa30.41■■■□□ 2.46
C9orf47-202ENST00000375850 LMOD1P29536 600 aaPredicted RBP30.39■■■□□ 2.46
C9orf47-202ENST00000375850 LARGE2Q8N3Y3 721 aa30.39■■■□□ 2.46
C9orf47-202ENST00000375850 PCNTO95613 3336 aa30.39■■■□□ 2.46
C9orf47-202ENST00000375850 MYBBP1AQ9BQG0 1328 aaKnown RBP30.38■■■□□ 2.45
C9orf47-202ENST00000375850 ATP6V0A2Q9Y487 856 aa30.36■■■□□ 2.45
C9orf47-202ENST00000375850 NIM1KQ8IY84 436 aa30.35■■■□□ 2.45
C9orf47-202ENST00000375850 CNTROBQ8N137 903 aa30.35■■■□□ 2.45
C9orf47-202ENST00000375850 SUPT20HQ8NEM7 779 aa30.35■■■□□ 2.45
C9orf47-202ENST00000375850 ADAMTSL1Q8N6G6 1762 aa30.35■■■□□ 2.45
C9orf47-202ENST00000375850 COPS6Q7L5N1 327 aa30.34■■■□□ 2.45
C9orf47-202ENST00000375850 DDX21Q9NR30 783 aaKnown RBP eCLIP30.34■■■□□ 2.45
C9orf47-202ENST00000375850 GJA3Q9Y6H8 435 aa30.34■■■□□ 2.45
C9orf47-202ENST00000375850 CHL1O00533 1208 aa30.33■■■□□ 2.45
C9orf47-202ENST00000375850 BBOX1O75936 387 aa30.33■■■□□ 2.45
C9orf47-202ENST00000375850 PROSER3Q2NL68 480 aa30.33■■■□□ 2.45
C9orf47-202ENST00000375850 C3orf67Q6ZVT6 689 aa30.33■■■□□ 2.45
C9orf47-202ENST00000375850 PPIP5K2O43314 1243 aa30.31■■■□□ 2.44
C9orf47-202ENST00000375850 HOXB7P09629 217 aa30.31■■■□□ 2.44
C9orf47-202ENST00000375850 TCIRG1Q13488 830 aa30.31■■■□□ 2.44
C9orf47-202ENST00000375850 NLRP10Q86W26 655 aa30.31■■■□□ 2.44
C9orf47-202ENST00000375850 XAGE3Q8WTP9 111 aa30.31■■■□□ 2.44
C9orf47-202ENST00000375850 RUNDC1Q96C34 613 aa30.31■■■□□ 2.44
C9orf47-202ENST00000375850 ABCC4O15439 1325 aa30.3■■■□□ 2.44
C9orf47-202ENST00000375850 ANXA1P04083 346 aa30.3■■■□□ 2.44
C9orf47-202ENST00000375850 WDR43Q15061 677 aaKnown RBP eCLIP30.3■■■□□ 2.44
C9orf47-202ENST00000375850 MAP1SQ66K74 1059 aaPredicted RBP30.3■■■□□ 2.44
C9orf47-202ENST00000375850 USP50Q70EL3 339 aaPredicted RBP30.3■■■□□ 2.44
C9orf47-202ENST00000375850 RTFDC1Q9BY42 306 aaPredicted RBP30.3■■■□□ 2.44
C9orf47-202ENST00000375850 RASSF10A6NK89 507 aa30.29■■■□□ 2.44
C9orf47-202ENST00000375850 TCERG1O14776 1098 aaKnown RBP30.29■■■□□ 2.44
C9orf47-202ENST00000375850 SCNN1DP51172 638 aa30.29■■■□□ 2.44
C9orf47-202ENST00000375850 AIMP1Q12904 312 aaKnown RBP30.29■■■□□ 2.44
C9orf47-202ENST00000375850 SP8Q8IXZ3 490 aa30.29■■■□□ 2.44
C9orf47-202ENST00000375850 COL4A5P29400 1685 aa30.29■■■□□ 2.44
C9orf47-202ENST00000375850 SH3TC1Q8TE82 1336 aa30.28■■■□□ 2.44
C9orf47-202ENST00000375850 TMC4Q7Z404 712 aa30.28■■■□□ 2.44
C9orf47-202ENST00000375850 AIDAQ96BJ3 306 aa30.28■■■□□ 2.44
C9orf47-202ENST00000375850 TRMT112Q9UI30 125 aaKnown RBP30.28■■■□□ 2.44
C9orf47-202ENST00000375850 VEGFBP49765 207 aa30.27■■■□□ 2.44
C9orf47-202ENST00000375850 NEUROD2Q15784 382 aa30.27■■■□□ 2.44
C9orf47-202ENST00000375850 DDX46Q7L014 1031 aaKnown RBP30.27■■■□□ 2.44
C9orf47-202ENST00000375850 DPP8Q6V1X1 898 aaPredicted RBP30.26■■■□□ 2.43
C9orf47-202ENST00000375850 NECTIN2Q92692 538 aa30.26■■■□□ 2.43
C9orf47-202ENST00000375850 ZNRF3Q9ULT6 936 aa30.26■■■□□ 2.43
C9orf47-202ENST00000375850 DDX10Q13206 875 aaKnown RBP30.25■■■□□ 2.43
C9orf47-202ENST00000375850 AOC3Q16853 763 aa30.25■■■□□ 2.43
C9orf47-202ENST00000375850 DEFB115Q30KQ5 88 aa30.25■■■□□ 2.43
C9orf47-202ENST00000375850 CCDC146Q8IYE0 955 aa30.25■■■□□ 2.43
C9orf47-202ENST00000375850 PRDM10Q9NQV6 1147 aa30.25■■■□□ 2.43
C9orf47-202ENST00000375850 EPS15P42566 896 aa30.24■■■□□ 2.43
C9orf47-202ENST00000375850 GRAPQ13588 217 aa30.24■■■□□ 2.43
C9orf47-202ENST00000375850 MPNDQ8N594 471 aa30.24■■■□□ 2.43
C9orf47-202ENST00000375850 PLBD2Q8NHP8 589 aa30.24■■■□□ 2.43
C9orf47-202ENST00000375850 GRAPLQ8TC17 118 aaPredicted RBP30.24■■■□□ 2.43
C9orf47-202ENST00000375850 DBF4Q9UBU7 674 aaPredicted RBP30.24■■■□□ 2.43
C9orf47-202ENST00000375850 TRIM35Q9UPQ4 493 aa30.24■■■□□ 2.43
C9orf47-202ENST00000375850 CDHR2Q9BYE9 1310 aa30.23■■■□□ 2.43
C9orf47-202ENST00000375850 HCLS1P14317 486 aaPredicted RBP30.23■■■□□ 2.43
C9orf47-202ENST00000375850 CTCFP49711 727 aaPredicted RBP30.23■■■□□ 2.43
C9orf47-202ENST00000375850 HDGFL1Q5TGJ6 251 aa30.23■■■□□ 2.43
C9orf47-202ENST00000375850 ADARB2Q9NS39 739 aaKnown RBP30.22■■■□□ 2.43
C9orf47-202ENST00000375850 GPRC5DQ9NZD1 345 aa30.22■■■□□ 2.43
C9orf47-202ENST00000375850 CHPF2Q9P2E5 772 aa30.22■■■□□ 2.43
C9orf47-202ENST00000375850 LAS1LQ9Y4W2 734 aaKnown RBP30.22■■■□□ 2.43
C9orf47-202ENST00000375850 ANKRD36CQ5JPF3 1778 aa30.22■■■□□ 2.43
C9orf47-202ENST00000375850 FOXN1O15353 648 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms