RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 STK38Q15208 465 aa16.16■□□□□ 0.18
MCF2L-204ENST00000375608 LEO1Q8WVC0 666 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-204ENST00000375608 SHROOM2Q13796 1616 aa16.16■□□□□ 0.18
MCF2L-204ENST00000375608 SMTNL1A8MU46 457 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 ANKRD1Q15327 319 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 IL17REQ8NFR9 667 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 EVI5LQ96CN4 794 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 LGR6Q9HBX8 967 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 CCDC171Q6TFL3 1326 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 SKIDA1Q1XH10 827 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 TMC6Q7Z403 805 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 KIF24Q5T7B8 1368 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 CPLX1O14810 134 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 ZBTB22O15209 634 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 DDX46Q7L014 1031 aaKnown RBP16.15■□□□□ 0.18
MCF2L-204ENST00000375608 SSH3Q8TE77 659 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 STAP2Q9UGK3 403 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 CFAP45Q9UL16 551 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 NPHP3Q7Z494 1330 aa16.15■□□□□ 0.18
MCF2L-204ENST00000375608 ZCCHC11Q5TAX3 1644 aaKnown RBP16.14■□□□□ 0.17
MCF2L-204ENST00000375608 CEP57L1Q8IYX8 460 aa16.14■□□□□ 0.17
MCF2L-204ENST00000375608 OGFRQ9NZT2 677 aa16.14■□□□□ 0.17
MCF2L-204ENST00000375608 EDC4Q6P2E9 1401 aaKnown RBP16.14■□□□□ 0.17
MCF2L-204ENST00000375608 RPAP1Q9BWH6 1393 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-204ENST00000375608 ATP2B1P20020 1258 aa16.14■□□□□ 0.17
MCF2L-204ENST00000375608 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■■■□ 22.9
MCF2L-204ENST00000375608 Q6ZUG5 572 aa16.14■□□□□ 0.17
MCF2L-204ENST00000375608 SLC27A2O14975 620 aa16.13■□□□□ 0.17
MCF2L-204ENST00000375608 NCBP1Q09161 790 aaKnown RBP16.13■□□□□ 0.17
MCF2L-204ENST00000375608 PI4K2BQ8TCG2 481 aa16.13■□□□□ 0.17
MCF2L-204ENST00000375608 URI1O94763 535 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-204ENST00000375608 TTLL5Q6EMB2 1281 aa16.13■□□□□ 0.17
MCF2L-204ENST00000375608 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
MCF2L-204ENST00000375608 PTPN21Q16825 1174 aa16.13■□□□□ 0.17
MCF2L-204ENST00000375608 ERC1Q8IUD2 1116 aa16.13■□□□□ 0.17
MCF2L-204ENST00000375608 NCOA5Q9HCD5 579 aaKnown RBP16.13■□□□□ 0.17
MCF2L-204ENST00000375608 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
MCF2L-204ENST00000375608 A0A0D9SFI3 127 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 OTUD7BQ6GQQ9 843 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 SYT10Q6XYQ8 523 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 SYNE3Q6ZMZ3 975 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 KRT222Q8N1A0 295 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 PAXBP1Q9Y5B6 917 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 EID1Q9Y6B2 187 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 PRR36Q9H6K5 1346 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 A0A0G2JS52 829 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 NEK1Q96PY6 1258 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 NAT10Q9H0A0 1025 aaKnown RBP16.12■□□□□ 0.17
MCF2L-204ENST00000375608 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-204ENST00000375608 SERPINC1P01008 464 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 SFPQP23246 707 aaKnown RBP eCLIP16.12■□□□□ 0.17
MCF2L-204ENST00000375608 WASHC4Q2M389 1173 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 ZSWIM4Q9H7M6 989 aa16.12■□□□□ 0.17
MCF2L-204ENST00000375608 ABCC3O15438 1527 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 CCDC66A2RUB6 948 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 KIF20AO95235 890 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 DDX58O95786 925 aaKnown RBP16.11■□□□□ 0.17
MCF2L-204ENST00000375608 SNW1Q13573 536 aaKnown RBP16.11■□□□□ 0.17
MCF2L-204ENST00000375608 CCDC144BQ3MJ40 725 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 CCDC144CPQ8IYA2 1237 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 TTC14Q96N46 770 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 CCDC85AQ96PX6 553 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-204ENST00000375608 A0A1B0GVL5 298 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 USP27XA6NNY8 438 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 HIP1O00291 1037 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 SEC62Q99442 399 aaKnown RBP16.11■□□□□ 0.17
MCF2L-204ENST00000375608 LMOD1P29536 600 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-204ENST00000375608 HAND2P61296 217 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 UBXN4Q92575 508 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 SPTLC3Q9NUV7 552 aa16.11■□□□□ 0.17
MCF2L-204ENST00000375608 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
MCF2L-204ENST00000375608 CEBPAP49715 358 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-204ENST00000375608 LRRC59Q96AG4 307 aaKnown RBP16.1■□□□□ 0.17
MCF2L-204ENST00000375608 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
MCF2L-204ENST00000375608 APOBRQ0VD83 1088 aa16.1■□□□□ 0.17
MCF2L-204ENST00000375608 FEZ1Q99689 392 aa16.1■□□□□ 0.17
MCF2L-204ENST00000375608 TOMM22Q9NS69 142 aa16.1■□□□□ 0.17
MCF2L-204ENST00000375608 ANO10Q9NW15 660 aa16.1■□□□□ 0.17
MCF2L-204ENST00000375608 DNAI1Q9UI46 699 aa16.1■□□□□ 0.17
MCF2L-204ENST00000375608 STX1AQ16623 288 aa16.09■□□□□ 0.17
MCF2L-204ENST00000375608 EAF2Q96CJ1 260 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-204ENST00000375608 CLSTN2Q9H4D0 955 aa16.09■□□□□ 0.17
MCF2L-204ENST00000375608 ZSWIM6Q9HCJ5 1215 aa16.09■□□□□ 0.17
MCF2L-204ENST00000375608 ADGRB3O60242 1522 aa16.09■□□□□ 0.17
MCF2L-204ENST00000375608 MROH2AA6NES4 1674 aa16.09■□□□□ 0.17
MCF2L-204ENST00000375608 PPRC1Q5VV67 1664 aaKnown RBP16.09■□□□□ 0.17
MCF2L-204ENST00000375608 ATP5J2-PTCD1G3V325 749 aa16.09■□□□□ 0.17
MCF2L-204ENST00000375608 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
MCF2L-204ENST00000375608 CSB-PGBD3P0DP91 1061 aa16.09■□□□□ 0.17
MCF2L-204ENST00000375608 COL9A3Q14050 684 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-204ENST00000375608 C11orf57Q6ZUT1 292 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-204ENST00000375608 METP08581 1390 aa16.09■□□□□ 0.17
MCF2L-204ENST00000375608 ERCC6LQ2NKX8 1250 aa16.09■□□□□ 0.17
MCF2L-204ENST00000375608 CFAP100Q494V2 611 aa16.09■□□□□ 0.17
MCF2L-204ENST00000375608 ADGRB2O60241 1585 aa16.08■□□□□ 0.17
MCF2L-204ENST00000375608 APPP05067 770 aa16.08■□□□□ 0.17
MCF2L-204ENST00000375608 PSME1Q06323 249 aa16.08■□□□□ 0.17
MCF2L-204ENST00000375608 SLC39A6Q13433 755 aa16.08■□□□□ 0.17
MCF2L-204ENST00000375608 CHGBP05060 677 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms