RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 KCPQ6ZWJ8 1503 aa14.77□□□□□ -0.05
UBR4-203ENST00000375225 GLI3P10071 1580 aa14.77□□□□□ -0.05
UBR4-203ENST00000375225 SGSM2O43147 1006 aa14.76□□□□□ -0.05
UBR4-203ENST00000375225 MBD3O95983 291 aa14.76□□□□□ -0.05
UBR4-203ENST00000375225 EVI5LQ96CN4 794 aa14.76□□□□□ -0.05
UBR4-203ENST00000375225 FAM98CQ17RN3 349 aaKnown RBP14.76□□□□□ -0.05
UBR4-203ENST00000375225 AFF2P51816 1311 aa14.75□□□□□ -0.05
UBR4-203ENST00000375225 KAT6BQ8WYB5 2073 aa14.75□□□□□ -0.05
UBR4-203ENST00000375225 THSD7AQ9UPZ6 1657 aa14.75□□□□□ -0.05
UBR4-203ENST00000375225 BCL9O00512 1426 aa14.74□□□□□ -0.05
UBR4-203ENST00000375225 A0A0G2JS52 829 aa14.74□□□□□ -0.05
UBR4-203ENST00000375225 PRAMEF22A3QJZ6 481 aa14.74□□□□□ -0.05
UBR4-203ENST00000375225 PDIA4P13667 645 aaKnown RBP14.74□□□□□ -0.05
UBR4-203ENST00000375225 NCLP19338 710 aaKnown RBP14.74□□□□□ -0.05
UBR4-203ENST00000375225 SYAP1Q96A49 352 aaPredicted RBP14.74□□□□□ -0.05
UBR4-203ENST00000375225 TRIM44Q96DX7 344 aaPredicted RBP14.74□□□□□ -0.05
UBR4-203ENST00000375225 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.74□□□□□ -0.05
UBR4-203ENST00000375225 ERBB4Q15303 1308 aa14.74□□□□□ -0.05
UBR4-203ENST00000375225 ANXA1P04083 346 aa14.73□□□□□ -0.05
UBR4-203ENST00000375225 PIGBQ92521 554 aa14.73□□□□□ -0.05
UBR4-203ENST00000375225 SYTL4Q96C24 671 aaPredicted RBP14.73□□□□□ -0.05
UBR4-203ENST00000375225 RTN4Q9NQC3 1192 aaKnown RBP14.73□□□□□ -0.05
UBR4-203ENST00000375225 TRPC5Q9UL62 973 aaPredicted RBP14.73□□□□□ -0.05
UBR4-203ENST00000375225 WDR33Q9C0J8 1336 aaKnown RBP14.73□□□□□ -0.05
UBR4-203ENST00000375225 ATRNO75882 1429 aa14.73□□□□□ -0.05
UBR4-203ENST00000375225 ZNF445P59923 1031 aa14.72□□□□□ -0.05
UBR4-203ENST00000375225 ZGPATQ8N5A5 531 aaKnown RBP14.72□□□□□ -0.05
UBR4-203ENST00000375225 ARXQ96QS3 562 aa14.72□□□□□ -0.05
UBR4-203ENST00000375225 METTL22Q9BUU2 404 aaPredicted RBP14.72□□□□□ -0.05
UBR4-203ENST00000375225 TEX13AQ9BXU3 409 aaPredicted RBP14.72□□□□□ -0.05
UBR4-203ENST00000375225 PTCD1O75127 700 aaKnown RBP14.71□□□□□ -0.05
UBR4-203ENST00000375225 ZKSCAN1P17029 563 aaPredicted RBP14.71□□□□□ -0.05
UBR4-203ENST00000375225 AIMP1Q12904 312 aaKnown RBP14.71□□□□□ -0.05
UBR4-203ENST00000375225 AACSQ86V21 672 aa14.71□□□□□ -0.05
UBR4-203ENST00000375225 VSIG10Q8N0Z9 540 aa14.71□□□□□ -0.05
UBR4-203ENST00000375225 MARCH10Q8NA82 808 aaPredicted RBP14.71□□□□□ -0.05
UBR4-203ENST00000375225 ZSCAN31Q96LW9 406 aaPredicted RBP14.71□□□□□ -0.05
UBR4-203ENST00000375225 LSG1Q9H089 658 aaKnown RBP14.71□□□□□ -0.05
UBR4-203ENST00000375225 LMBRD1Q9NUN5 540 aa14.71□□□□□ -0.05
UBR4-203ENST00000375225 ATP6V1DQ9Y5K8 247 aa14.71□□□□□ -0.05
UBR4-203ENST00000375225 COL15A1P39059 1388 aa14.71□□□□□ -0.05
UBR4-203ENST00000375225 BRD1O95696 1058 aa14.71□□□□□ -0.06
UBR4-203ENST00000375225 CCDC173Q0VFZ6 552 aa14.71□□□□□ -0.06
UBR4-203ENST00000375225 PROSER3Q2NL68 480 aa14.71□□□□□ -0.06
UBR4-203ENST00000375225 SUCLG2Q96I99 432 aa14.71□□□□□ -0.06
UBR4-203ENST00000375225 GJD4Q96KN9 370 aaPredicted RBP14.71□□□□□ -0.06
UBR4-203ENST00000375225 TM6SF1Q9BZW5 370 aa14.71□□□□□ -0.06
UBR4-203ENST00000375225 PALD1Q9ULE6 856 aa14.71□□□□□ -0.06
UBR4-203ENST00000375225 USP16Q9Y5T5 823 aa14.71□□□□□ -0.06
UBR4-203ENST00000375225 NEURL1BA8MQ27 555 aa14.7□□□□□ -0.06
UBR4-203ENST00000375225 PHF14O94880 888 aa14.7□□□□□ -0.06
UBR4-203ENST00000375225 PSMA5P28066 241 aa14.7□□□□□ -0.06
UBR4-203ENST00000375225 PRIM1P49642 420 aaKnown RBP14.7□□□□□ -0.06
UBR4-203ENST00000375225 CSPP1Q1MSJ5 1256 aa14.7□□□□□ -0.06
UBR4-203ENST00000375225 CWF19L2Q2TBE0 894 aaKnown RBP14.7□□□□□ -0.06
UBR4-203ENST00000375225 RNF20Q5VTR2 975 aa14.7□□□□□ -0.06
UBR4-203ENST00000375225 CWC27Q6UX04 472 aaKnown RBP14.7□□□□□ -0.06
UBR4-203ENST00000375225 BICC1Q9H694 974 aaKnown RBP14.7□□□□□ -0.06
UBR4-203ENST00000375225 ATG3Q9NT62 314 aa14.7□□□□□ -0.06
UBR4-203ENST00000375225 LIMCH1Q9UPQ0 1083 aa14.7□□□□□ -0.06
UBR4-203ENST00000375225 PRPF40AO75400 957 aaKnown RBP14.69□□□□□ -0.06
UBR4-203ENST00000375225 MAP4K4O95819 1239 aaPredicted RBP14.69□□□□□ -0.06
UBR4-203ENST00000375225 MYL6BP14649 208 aa14.69□□□□□ -0.06
UBR4-203ENST00000375225 GCKRQ14397 625 aa14.69□□□□□ -0.06
UBR4-203ENST00000375225 PDIA6Q15084 440 aa14.69□□□□□ -0.06
UBR4-203ENST00000375225 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
UBR4-203ENST00000375225 XAGE3Q8WTP9 111 aa14.69□□□□□ -0.06
UBR4-203ENST00000375225 SH2B1Q9NRF2 756 aaPredicted RBP14.69□□□□□ -0.06
UBR4-203ENST00000375225 ASAP1Q9ULH1 1129 aa14.69□□□□□ -0.06
UBR4-203ENST00000375225 SNX14Q9Y5W7 946 aa14.69□□□□□ -0.06
UBR4-203ENST00000375225 NASPP49321 788 aaPredicted RBP14.68□□□□□ -0.06
UBR4-203ENST00000375225 KLHL34Q8N239 644 aa14.68□□□□□ -0.06
UBR4-203ENST00000375225 RFX7Q2KHR2 1363 aa14.68□□□□□ -0.06
UBR4-203ENST00000375225 STARD3NLO95772 234 aa14.67□□□□□ -0.06
UBR4-203ENST00000375225 KCNJ4P48050 445 aa14.67□□□□□ -0.06
UBR4-203ENST00000375225 ANKRD1Q15327 319 aa14.67□□□□□ -0.06
UBR4-203ENST00000375225 VPS53Q5VIR6 699 aa14.67□□□□□ -0.06
UBR4-203ENST00000375225 CAVIN1Q6NZI2 390 aaKnown RBP14.67□□□□□ -0.06
UBR4-203ENST00000375225 COPS6Q7L5N1 327 aa14.67□□□□□ -0.06
UBR4-203ENST00000375225 TICAM2Q86XR7 235 aa14.67□□□□□ -0.06
UBR4-203ENST00000375225 ACSBG1Q96GR2 724 aa14.67□□□□□ -0.06
UBR4-203ENST00000375225 MYD88Q99836 296 aa14.67□□□□□ -0.06
UBR4-203ENST00000375225 CYP46A1Q9Y6A2 500 aa14.67□□□□□ -0.06
UBR4-203ENST00000375225 AFDNP55196 1824 aaKnown RBP14.67□□□□□ -0.06
UBR4-203ENST00000375225 ARFGEF2Q9Y6D5 1785 aa14.67□□□□□ -0.06
UBR4-203ENST00000375225 KCNB2Q92953 911 aa14.66□□□□□ -0.06
UBR4-203ENST00000375225 UPF3BQ9BZI7 483 aaKnown RBP14.66□□□□□ -0.06
UBR4-203ENST00000375225 TJP1Q07157 1748 aa14.66□□□□□ -0.06
UBR4-203ENST00000375225 NHSQ6T4R5 1651 aa14.66□□□□□ -0.06
UBR4-203ENST00000375225 CICQ96RK0 1608 aaPredicted RBP14.66□□□□□ -0.06
UBR4-203ENST00000375225 IGKV5-2P06315 115 aa14.66□□□□□ -0.06
UBR4-203ENST00000375225 ZSCAN23Q3MJ62 389 aa14.66□□□□□ -0.06
UBR4-203ENST00000375225 PLBD2Q8NHP8 589 aa14.66□□□□□ -0.06
UBR4-203ENST00000375225 SMARCC1Q92922 1105 aaPredicted RBP14.66□□□□□ -0.06
UBR4-203ENST00000375225 PANK2Q9BZ23 570 aa14.66□□□□□ -0.06
UBR4-203ENST00000375225 QTRT2Q9H974 415 aaKnown RBP14.66□□□□□ -0.06
UBR4-203ENST00000375225 COPRSQ9NQ92 184 aa14.66□□□□□ -0.06
UBR4-203ENST00000375225 HMG20BQ9P0W2 317 aa14.66□□□□□ -0.06
UBR4-203ENST00000375225 PA2G4Q9UQ80 394 aaKnown RBP14.66□□□□□ -0.06
UBR4-203ENST00000375225 SMC3Q9UQE7 1217 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms