RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 C10orf67Q8IYJ2 551 aa24.25■■□□□ 1.47
TMEFF1-201ENST00000374879 LCMT1Q9UIC8 334 aa24.25■■□□□ 1.47
TMEFF1-201ENST00000374879 ROBO2Q9HCK4 1378 aa24.25■■□□□ 1.47
TMEFF1-201ENST00000374879 SLC4A10Q6U841 1118 aa24.25■■□□□ 1.47
TMEFF1-201ENST00000374879 CHMP4CQ96CF2 233 aa24.25■■□□□ 1.47
TMEFF1-201ENST00000374879 HYPKQ9NX55 129 aa24.25■■□□□ 1.47
TMEFF1-201ENST00000374879 USP16Q9Y5T5 823 aa24.25■■□□□ 1.47
TMEFF1-201ENST00000374879 FILIP1Q7Z7B0 1213 aa24.24■■□□□ 1.47
TMEFF1-201ENST00000374879 SMARCE1Q969G3 411 aa24.24■■□□□ 1.47
TMEFF1-201ENST00000374879 SYTL4Q96C24 671 aaPredicted RBP24.24■■□□□ 1.47
TMEFF1-201ENST00000374879 NUTM2FA1L443 756 aa24.24■■□□□ 1.47
TMEFF1-201ENST00000374879 EPB41L2O43491 1005 aaKnown RBP24.24■■□□□ 1.47
TMEFF1-201ENST00000374879 MAP4K4O95819 1239 aaPredicted RBP24.24■■□□□ 1.47
TMEFF1-201ENST00000374879 ARHGAP29Q52LW3 1261 aa24.24■■□□□ 1.47
TMEFF1-201ENST00000374879 CLSTN2Q9H4D0 955 aa24.24■■□□□ 1.47
TMEFF1-201ENST00000374879 L2HGDHQ9H9P8 463 aa24.24■■□□□ 1.47
TMEFF1-201ENST00000374879 STAP2Q9UGK3 403 aa24.24■■□□□ 1.47
TMEFF1-201ENST00000374879 ZRANB2O95218 330 aaKnown RBP eCLIP24.23■■□□□ 1.47
TMEFF1-201ENST00000374879 CHRM1P11229 460 aaPredicted RBP24.23■■□□□ 1.47
TMEFF1-201ENST00000374879 TTC21BQ7Z4L5 1316 aa24.23■■□□□ 1.47
TMEFF1-201ENST00000374879 DHX16O60231 1041 aaKnown RBP24.23■■□□□ 1.47
TMEFF1-201ENST00000374879 CASTP20810 708 aaKnown RBP24.23■■□□□ 1.47
TMEFF1-201ENST00000374879 LRRFIP2Q9Y608 721 aaKnown RBP24.23■■□□□ 1.47
TMEFF1-201ENST00000374879 ELP1O95163 1332 aa24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 GOLGA6L4A6NEF3 574 aa24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 MYO1CO00159 1063 aa24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 DDX19AQ9NUU7 478 aaKnown RBP24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 F6X3S4 739 aa24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 NR1I2O75469 434 aa24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 GYS2P54840 703 aa24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 TPM4P67936 248 aa24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 ST3GAL1Q11201 340 aa24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 TFIP11Q9UBB9 837 aaKnown RBP24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 TNRQ92752 1358 aa24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 ACEP12821 1306 aa24.22■■□□□ 1.47
TMEFF1-201ENST00000374879 CDC37L1Q7L3B6 337 aa24.21■■□□□ 1.47
TMEFF1-201ENST00000374879 MRFAP1L1Q96HT8 127 aa24.21■■□□□ 1.47
TMEFF1-201ENST00000374879 ZCCHC17Q9NP64 241 aaKnown RBP24.21■■□□□ 1.47
TMEFF1-201ENST00000374879 NRKQ7Z2Y5 1582 aa24.21■■□□□ 1.47
TMEFF1-201ENST00000374879 TMEM2Q9UHN6 1383 aa24.21■■□□□ 1.47
TMEFF1-201ENST00000374879 MCM10Q7L590 875 aa24.21■■□□□ 1.47
TMEFF1-201ENST00000374879 YY1AP1Q9H869 796 aa24.21■■□□□ 1.47
TMEFF1-201ENST00000374879 GOLGA6L19H0YKK7 550 aa24.2■■□□□ 1.47
TMEFF1-201ENST00000374879 IQCB1Q15051 598 aa24.2■■□□□ 1.47
TMEFF1-201ENST00000374879 CCDC93Q567U6 631 aa24.2■■□□□ 1.47
TMEFF1-201ENST00000374879 SARM1Q6SZW1 724 aa24.2■■□□□ 1.47
TMEFF1-201ENST00000374879 LSG1Q9H089 658 aaKnown RBP24.2■■□□□ 1.47
TMEFF1-201ENST00000374879 TTC21AQ8NDW8 1320 aa24.2■■□□□ 1.46
TMEFF1-201ENST00000374879 PNMA6EA0A0J9YXQ4 647 aa24.2■■□□□ 1.46
TMEFF1-201ENST00000374879 SGSM2O43147 1006 aa24.2■■□□□ 1.46
TMEFF1-201ENST00000374879 SLC4A2P04920 1241 aa24.2■■□□□ 1.46
TMEFF1-201ENST00000374879 SNW1Q13573 536 aaKnown RBP24.2■■□□□ 1.46
TMEFF1-201ENST00000374879 LARP1BQ659C4 914 aaKnown RBP24.2■■□□□ 1.46
TMEFF1-201ENST00000374879 NECAB1Q8N987 351 aa24.2■■□□□ 1.46
TMEFF1-201ENST00000374879 TMCO3Q6UWJ1 677 aa24.19■■□□□ 1.46
TMEFF1-201ENST00000374879 CCDC191Q8NCU4 936 aa24.19■■□□□ 1.46
TMEFF1-201ENST00000374879 SECISBP2LQ93073 1101 aaKnown RBP24.19■■□□□ 1.46
TMEFF1-201ENST00000374879 KIF2AO00139 706 aaPredicted RBP24.19■■□□□ 1.46
TMEFF1-201ENST00000374879 GNAI2P04899 355 aa24.19■■□□□ 1.46
TMEFF1-201ENST00000374879 ZSCAN26Q16670 478 aa24.19■■□□□ 1.46
TMEFF1-201ENST00000374879 HSP90AB2PQ58FF8 381 aa24.19■■□□□ 1.46
TMEFF1-201ENST00000374879 CHL1O00533 1208 aa24.18■■□□□ 1.46
TMEFF1-201ENST00000374879 SPATA32Q96LK8 384 aa24.18■■□□□ 1.46
TMEFF1-201ENST00000374879 KCND1Q9NSA2 647 aa24.18■■□□□ 1.46
TMEFF1-201ENST00000374879 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.18■■□□□ 1.46
TMEFF1-201ENST00000374879 SOX12O15370 315 aa24.17■■□□□ 1.46
TMEFF1-201ENST00000374879 HAP1P54257 671 aaPredicted RBP24.17■■□□□ 1.46
TMEFF1-201ENST00000374879 C11orf57Q6ZUT1 292 aaPredicted RBP24.17■■□□□ 1.46
TMEFF1-201ENST00000374879 SEC31AO94979 1220 aaKnown RBP24.17■■□□□ 1.46
TMEFF1-201ENST00000374879 CASQ1P31415 396 aa24.17■■□□□ 1.46
TMEFF1-201ENST00000374879 ME3Q16798 604 aa24.17■■□□□ 1.46
TMEFF1-201ENST00000374879 PDRG1Q9NUG6 133 aa24.17■■□□□ 1.46
TMEFF1-201ENST00000374879 OVOS2A0A0J9YW53 1432 aa24.17■■□□□ 1.46
TMEFF1-201ENST00000374879 OVOS2Q6IE36 1432 aa24.17■■□□□ 1.46
TMEFF1-201ENST00000374879 GEMIN8Q9NWZ8 242 aaKnown RBP24.16■■□□□ 1.46
TMEFF1-201ENST00000374879 G2E3Q7L622 706 aa24.16■■□□□ 1.46
TMEFF1-201ENST00000374879 IL1RAPL2Q9NP60 686 aa24.16■■□□□ 1.46
TMEFF1-201ENST00000374879 SPG7Q9UQ90 795 aa24.16■■□□□ 1.46
TMEFF1-201ENST00000374879 NPHP3Q7Z494 1330 aa24.16■■□□□ 1.46
TMEFF1-201ENST00000374879 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
TMEFF1-201ENST00000374879 GTF2A1P52655 376 aaPredicted RBP24.15■■□□□ 1.46
TMEFF1-201ENST00000374879 ADCK5Q3MIX3 580 aa24.15■■□□□ 1.46
TMEFF1-201ENST00000374879 GORABQ5T7V8 394 aa24.15■■□□□ 1.46
TMEFF1-201ENST00000374879 E4F1Q66K89 784 aaPredicted RBP24.15■■□□□ 1.46
TMEFF1-201ENST00000374879 NUTM1Q86Y26 1132 aa24.15■■□□□ 1.46
TMEFF1-201ENST00000374879 ATG3Q9NT62 314 aa24.15■■□□□ 1.46
TMEFF1-201ENST00000374879 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.15■■□□□ 1.46
TMEFF1-201ENST00000374879 LEO1Q8WVC0 666 aaPredicted RBP24.15■■□□□ 1.46
TMEFF1-201ENST00000374879 UBXN6Q9BZV1 441 aa24.15■■□□□ 1.46
TMEFF1-201ENST00000374879 ORC3Q9UBD5 711 aaPredicted RBP24.15■■□□□ 1.46
TMEFF1-201ENST00000374879 DDX54Q8TDD1 881 aaKnown RBP24.14■■□□□ 1.46
TMEFF1-201ENST00000374879 ZSCAN31Q96LW9 406 aaPredicted RBP24.14■■□□□ 1.46
TMEFF1-201ENST00000374879 SCAND2PQ9GZW5 306 aaPredicted RBP24.14■■□□□ 1.46
TMEFF1-201ENST00000374879 SH2B1Q9NRF2 756 aaPredicted RBP24.14■■□□□ 1.46
TMEFF1-201ENST00000374879 ARGLU1Q9NWB6 273 aaPredicted RBP24.14■■□□□ 1.46
TMEFF1-201ENST00000374879 PLEKHG3A1L390 1219 aa24.14■■□□□ 1.45
TMEFF1-201ENST00000374879 OAS2P29728 719 aaKnown RBP24.14■■□□□ 1.45
TMEFF1-201ENST00000374879 BICD2Q8TD16 824 aa24.14■■□□□ 1.45
TMEFF1-201ENST00000374879 PGBD1Q96JS3 809 aa24.14■■□□□ 1.45
TMEFF1-201ENST00000374879 PPP1R13BQ96KQ4 1090 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms