RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 HDAC1Q13547 482 aaPredicted RBP14.28□□□□□ -0.12
NPLOC4-202ENST00000374747 JAKMIP3Q5VZ66 844 aa14.28□□□□□ -0.12
NPLOC4-202ENST00000374747 SHROOM2Q13796 1616 aa14.27□□□□□ -0.12
NPLOC4-202ENST00000374747 RNF17Q9BXT8 1623 aaKnown RBP14.27□□□□□ -0.12
NPLOC4-202ENST00000374747 MCM3P25205 808 aa14.27□□□□□ -0.12
NPLOC4-202ENST00000374747 ZNF397Q8NF99 534 aaPredicted RBP14.27□□□□□ -0.12
NPLOC4-202ENST00000374747 CEP131Q9UPN4 1083 aa14.27□□□□□ -0.12
NPLOC4-202ENST00000374747 KIF5CO60282 957 aa14.27□□□□□ -0.12
NPLOC4-202ENST00000374747 IL13P35225 146 aa14.27□□□□□ -0.12
NPLOC4-202ENST00000374747 FERMT3Q86UX7 667 aa14.27□□□□□ -0.12
NPLOC4-202ENST00000374747 CWC25Q9NXE8 425 aaPredicted RBP14.27□□□□□ -0.12
NPLOC4-202ENST00000374747 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.13
NPLOC4-202ENST00000374747 URI1O94763 535 aaPredicted RBP14.27□□□□□ -0.13
NPLOC4-202ENST00000374747 IMMTQ16891 758 aaKnown RBP14.27□□□□□ -0.13
NPLOC4-202ENST00000374747 CABLES1Q8TDN4 633 aa14.27□□□□□ -0.13
NPLOC4-202ENST00000374747 UBAC1Q9BSL1 405 aa14.27□□□□□ -0.13
NPLOC4-202ENST00000374747 DDX11Q96FC9 970 aa14.27□□□□□ -0.13
NPLOC4-202ENST00000374747 ZBTB3Q9H5J0 574 aa14.27□□□□□ -0.13
NPLOC4-202ENST00000374747 KDM5AP29375 1690 aaKnown RBP14.27□□□□□ -0.13
NPLOC4-202ENST00000374747 UBAP1LF5GYI3 381 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 IL2RBP14784 551 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 WWC2Q6AWC2 1192 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 ANKRD13DQ6ZTN6 518 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 CCDC83Q8IWF9 413 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 DHX37Q8IY37 1157 aaKnown RBP14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 SEPT11Q9NVA2 429 aaKnown RBP14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 CASQ1P31415 396 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 MCM5P33992 734 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 CLIP2Q9UDT6 1046 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 CHPF2Q9P2E5 772 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 IFIT1P09914 478 aaKnown RBP14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 IQGAP1P46940 1657 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 PLEKHG1Q9ULL1 1385 aa14.26□□□□□ -0.13
NPLOC4-202ENST00000374747 NEMFO60524 1076 aa14.25□□□□□ -0.13
NPLOC4-202ENST00000374747 VAMP4O75379 141 aa14.25□□□□□ -0.13
NPLOC4-202ENST00000374747 TNNT1P13805 278 aa14.25□□□□□ -0.13
NPLOC4-202ENST00000374747 SH2B1Q9NRF2 756 aaPredicted RBP14.25□□□□□ -0.13
NPLOC4-202ENST00000374747 ALDH1L1O75891 902 aa14.25□□□□□ -0.13
NPLOC4-202ENST00000374747 SPA17Q15506 151 aa14.25□□□□□ -0.13
NPLOC4-202ENST00000374747 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
NPLOC4-202ENST00000374747 ANKRD18BA2A2Z9 1011 aa14.25□□□□□ -0.13
NPLOC4-202ENST00000374747 SSBP05455 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
NPLOC4-202ENST00000374747 KIF4BQ2VIQ3 1234 aa14.25□□□□□ -0.13
NPLOC4-202ENST00000374747 TOP1P11387 765 aaKnown RBP14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 PPP1R42Q7Z4L9 355 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 PAF1Q8N7H5 531 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 DYDC1Q8WWB3 177 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 TBC1D2Q9BYX2 928 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 TET3O43151 1660 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 SSFA2P28290 1259 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 DCAF5Q96JK2 942 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 ORAI2Q96SN7 254 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 USP25Q9UHP3 1055 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 CTAGE5O15320 804 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 TDO2P48775 406 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 LRP2BPQ9P2M1 347 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 ATP2B2Q01814 1243 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 TSPOAP1O95153 1857 aa14.24□□□□□ -0.13
NPLOC4-202ENST00000374747 BMP2KLQ5H9B9 411 aa14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 FAM107BQ9H098 131 aa14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 RAI14Q9P0K7 980 aa14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 SYNMO15061 1565 aa14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 IDH1O75874 414 aaKnown RBP14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 BOLA2Q9H3K6 86 aa14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 ANXA1P04083 346 aa14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 KSR2Q6VAB6 950 aa14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 KRI1Q8N9T8 703 aaKnown RBP14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 ABCC3O15438 1527 aa14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 UBE3BQ7Z3V4 1068 aa14.23□□□□□ -0.13
NPLOC4-202ENST00000374747 KIF1BO60333 1816 aa14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 MAP2K1Q02750 393 aaPredicted RBP14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 ECHDC1Q9NTX5 307 aa14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 SLC39A6Q13433 755 aa14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 MYOM1P52179 1685 aa14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 ATP5J2-PTCD1G3V325 749 aa14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 CAVIN4Q5BKX8 364 aa14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 XAGE3Q8WTP9 111 aa14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 C16orf45Q96MC5 204 aaPredicted RBP14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 CCDC8Q9H0W5 538 aaPredicted RBP14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 PRPF40BQ6NWY9 871 aaKnown RBP14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 MEIS3Q99687 375 aa14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 GPTP24298 496 aa14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 ANKRD44Q8N8A2 993 aa14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
NPLOC4-202ENST00000374747 NLRP1Q9C000 1473 aa14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 CLASP1Q7Z460 1538 aa14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 POLR3GO15318 223 aaPredicted RBP14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 GSDMDP57764 484 aa14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 AIDAQ96BJ3 306 aa14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 ARHGAP31Q2M1Z3 1444 aa14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 RNMTO43148 476 aaKnown RBP14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 MICALCLQ6ZW33 695 aa14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 COPS6Q7L5N1 327 aa14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 SMARCC1Q92922 1105 aaPredicted RBP14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 DDX19AQ9NUU7 478 aaKnown RBP14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 SLC5A1P13866 664 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms