RNA–Protein interactions for RNA: ENST00000374602.2

TCEA3-202, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-202ENST00000374602 PNISRQ8TF01 805 aaKnown RBP8.59□□□□□ -1.03
TCEA3-202ENST00000374602 TMX4Q9H1E5 349 aaPredicted RBP8.59□□□□□ -1.03
TCEA3-202ENST00000374602 CEMIPQ8WUJ3 1361 aa8.59□□□□□ -1.03
TCEA3-202ENST00000374602 RNF123Q5XPI4 1314 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 ZNF541Q9H0D2 1346 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 RASSF10A6NK89 507 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 A1BGP04217 495 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 IARSP41252 1262 aaKnown RBP8.58□□□□□ -1.04
TCEA3-202ENST00000374602 LBX1P52954 281 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 DEFB115Q30KQ5 88 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 GRIPAP1Q4V328 841 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 GPC2Q8N158 579 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 NYXQ9GZU5 481 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 ZNF277Q9NRM2 450 aaPredicted RBP8.58□□□□□ -1.04
TCEA3-202ENST00000374602 NIP7Q9Y221 180 aaKnown RBP eCLIP8.58□□□□□ -1.04
TCEA3-202ENST00000374602 NUDCQ9Y266 331 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 DLG5Q8TDM6 1919 aa8.58□□□□□ -1.04
TCEA3-202ENST00000374602 NEFMP07197 916 aa8.57□□□□□ -1.04
TCEA3-202ENST00000374602 SNRPA1P09661 255 aaKnown RBP8.57□□□□□ -1.04
TCEA3-202ENST00000374602 CC2D2BQ6DHV5 1058 aa8.57□□□□□ -1.04
TCEA3-202ENST00000374602 CNTROBQ8N137 903 aa8.57□□□□□ -1.04
TCEA3-202ENST00000374602 WBP1LQ9NX94 342 aa8.57□□□□□ -1.04
TCEA3-202ENST00000374602 KDM3BQ7LBC6 1761 aa8.57□□□□□ -1.04
TCEA3-202ENST00000374602 WDR33Q9C0J8 1336 aaKnown RBP8.56□□□□□ -1.04
TCEA3-202ENST00000374602 PDE4DIPQ5VU43 2346 aa8.56□□□□□ -1.04
TCEA3-202ENST00000374602 IL17REQ8NFR9 667 aa8.56□□□□□ -1.04
TCEA3-202ENST00000374602 RPGRQ92834 1020 aaKnown RBP8.56□□□□□ -1.04
TCEA3-202ENST00000374602 PSMD1Q99460 953 aa8.56□□□□□ -1.04
TCEA3-202ENST00000374602 ANKRD36CQ5JPF3 1778 aa8.56□□□□□ -1.04
TCEA3-202ENST00000374602 RIC1Q4ADV7 1423 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 FAM177BA6PVY3 158 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 FZD9O00144 591 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 ITGBL1O95965 494 aaPredicted RBP8.55□□□□□ -1.04
TCEA3-202ENST00000374602 HSPA8P11142 646 aaKnown RBP8.55□□□□□ -1.04
TCEA3-202ENST00000374602 PRKAR2BP31323 418 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 HNRNPUQ00839 825 aaKnown RBP eCLIP8.55□□□□□ -1.04
TCEA3-202ENST00000374602 GRM1Q13255 1194 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 MAP1SQ66K74 1059 aaPredicted RBP8.55□□□□□ -1.04
TCEA3-202ENST00000374602 KIF6Q6ZMV9 814 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 NIM1KQ8IY84 436 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 SYNE4Q8N205 404 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 ABHD8Q96I13 439 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 GJA3Q9Y6H8 435 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 IBTKQ9P2D0 1353 aaPredicted RBP8.55□□□□□ -1.04
TCEA3-202ENST00000374602 CASP8AP2Q9UKL3 1982 aa8.55□□□□□ -1.04
TCEA3-202ENST00000374602 LTBP1Q14766 1721 aa8.54□□□□□ -1.04
TCEA3-202ENST00000374602 KLRG2A4D1S0 409 aaPredicted RBP8.54□□□□□ -1.04
TCEA3-202ENST00000374602 SPDYE2BA6NHP3 402 aa8.54□□□□□ -1.04
TCEA3-202ENST00000374602 CA12O43570 354 aa8.54□□□□□ -1.04
TCEA3-202ENST00000374602 SPDYE6P0CI01 402 aa8.54□□□□□ -1.04
TCEA3-202ENST00000374602 PIP4K2AP48426 406 aaPredicted RBP8.54□□□□□ -1.04
TCEA3-202ENST00000374602 SPDYE2Q495Y8 402 aa8.54□□□□□ -1.04
TCEA3-202ENST00000374602 LARGE2Q8N3Y3 721 aa8.54□□□□□ -1.04
TCEA3-202ENST00000374602 C7orf43Q8WVR3 580 aa8.54□□□□□ -1.04
TCEA3-202ENST00000374602 CAPNS2Q96L46 248 aa8.54□□□□□ -1.04
TCEA3-202ENST00000374602 DDX21Q9NR30 783 aaKnown RBP eCLIP8.54□□□□□ -1.04
TCEA3-202ENST00000374602 AKAP11Q9UKA4 1901 aa8.54□□□□□ -1.04
TCEA3-202ENST00000374602 DDX60Q8IY21 1712 aaKnown RBP8.54□□□□□ -1.04
TCEA3-202ENST00000374602 ABCC12Q96J65 1359 aa8.53□□□□□ -1.04
TCEA3-202ENST00000374602 CCDC85CA6NKD9 419 aa8.53□□□□□ -1.04
TCEA3-202ENST00000374602 SLC34A2O95436 690 aa8.53□□□□□ -1.04
TCEA3-202ENST00000374602 MLLT1Q03111 559 aaPredicted RBP8.53□□□□□ -1.04
TCEA3-202ENST00000374602 USP50Q70EL3 339 aaPredicted RBP8.53□□□□□ -1.04
TCEA3-202ENST00000374602 CFAP44Q96MT7 982 aa8.53□□□□□ -1.04
TCEA3-202ENST00000374602 USP16Q9Y5T5 823 aa8.53□□□□□ -1.04
TCEA3-202ENST00000374602 LAMB2P55268 1798 aa8.53□□□□□ -1.04
TCEA3-202ENST00000374602 ZBED9Q6R2W3 1325 aa8.53□□□□□ -1.04
TCEA3-202ENST00000374602 PPEF1O14829 653 aaPredicted RBP8.52□□□□□ -1.05
TCEA3-202ENST00000374602 PPIP5K2O43314 1243 aa8.52□□□□□ -1.05
TCEA3-202ENST00000374602 HTATSF1O43719 755 aaKnown RBP8.52□□□□□ -1.05
TCEA3-202ENST00000374602 U2AF1L5P0DN76 240 aaPredicted RBP8.52□□□□□ -1.05
TCEA3-202ENST00000374602 U2AF1Q01081 240 aaKnown RBP eCLIP8.52□□□□□ -1.05
TCEA3-202ENST00000374602 CRY2Q49AN0 593 aa8.52□□□□□ -1.05
TCEA3-202ENST00000374602 SUPT20HQ8NEM7 779 aa8.52□□□□□ -1.05
TCEA3-202ENST00000374602 RBM17Q96I25 401 aaKnown RBP8.52□□□□□ -1.05
TCEA3-202ENST00000374602 GPR101Q96P66 508 aaPredicted RBP8.52□□□□□ -1.05
TCEA3-202ENST00000374602 RSPH6AQ9H0K4 717 aa8.52□□□□□ -1.05
TCEA3-202ENST00000374602 PNNQ9H307 717 aaKnown RBP8.52□□□□□ -1.05
TCEA3-202ENST00000374602 FBXO3Q9UK99 471 aa8.52□□□□□ -1.05
TCEA3-202ENST00000374602 ADAMTS8Q9UP79 889 aa8.52□□□□□ -1.05
TCEA3-202ENST00000374602 CDHR2Q9BYE9 1310 aa8.52□□□□□ -1.05
TCEA3-202ENST00000374602 ERVV-1B6SEH8 477 aa8.51□□□□□ -1.05
TCEA3-202ENST00000374602 KCNQ3O43525 872 aa8.51□□□□□ -1.05
TCEA3-202ENST00000374602 MAP2K2P36507 400 aa8.51□□□□□ -1.05
TCEA3-202ENST00000374602 OLFM4Q6UX06 510 aa8.51□□□□□ -1.05
TCEA3-202ENST00000374602 MCM10Q7L590 875 aa8.51□□□□□ -1.05
TCEA3-202ENST00000374602 NGEFQ8N5V2 710 aa8.51□□□□□ -1.05
TCEA3-202ENST00000374602 VPS33BQ9H267 617 aa8.51□□□□□ -1.05
TCEA3-202ENST00000374602 ADARB2Q9NS39 739 aaKnown RBP8.51□□□□□ -1.05
TCEA3-202ENST00000374602 SNED1Q8TER0 1413 aa8.51□□□□□ -1.05
TCEA3-202ENST00000374602 MAP3K15Q6ZN16 1313 aa8.51□□□□□ -1.05
TCEA3-202ENST00000374602 PRAMEF22A3QJZ6 481 aa8.5□□□□□ -1.05
TCEA3-202ENST00000374602 SCNN1DP51172 638 aa8.5□□□□□ -1.05
TCEA3-202ENST00000374602 CYP4F22Q6NT55 531 aa8.5□□□□□ -1.05
TCEA3-202ENST00000374602 PPP1R42Q7Z4L9 355 aa8.5□□□□□ -1.05
TCEA3-202ENST00000374602 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
TCEA3-202ENST00000374602 TLL2Q9Y6L7 1015 aa8.5□□□□□ -1.05
TCEA3-202ENST00000374602 ERBB4Q15303 1308 aa8.5□□□□□ -1.05
TCEA3-202ENST00000374602 COL4A5P29400 1685 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms