RNA–Protein interactions for RNA: ENST00000373668.7

COL16A1-202, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL16A1, Length 3,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-202ENST00000373668 UQCRHP07919 91 aa16.56■□□□□ 0.24
COL16A1-202ENST00000373668 MPHOSPH8Q99549 860 aa16.56■□□□□ 0.24
COL16A1-202ENST00000373668 SNAP23O00161 211 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 FBXW7Q969H0 707 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 PDCL3Q9H2J4 239 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 PXDNQ92626 1479 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 NEURL1BA8MQ27 555 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 NBPF26B4DH59 902 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 METTL24Q5JXM2 366 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 TTC22Q5TAA0 569 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 NBPF14Q5TI25 921 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 NBPF10Q6P3W6 841 aaKnown RBP16.55■□□□□ 0.24
COL16A1-202ENST00000373668 VPS37DQ86XT2 251 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 NBPF15Q8N660 670 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
COL16A1-202ENST00000373668 TFCP2Q12800 502 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 RBSNQ9H1K0 784 aa16.55■□□□□ 0.24
COL16A1-202ENST00000373668 GSPT1P15170 499 aaKnown RBP16.54■□□□□ 0.24
COL16A1-202ENST00000373668 UNC5CLQ8IV45 518 aa16.54■□□□□ 0.24
COL16A1-202ENST00000373668 ERC2O15083 957 aa16.54■□□□□ 0.24
COL16A1-202ENST00000373668 IGKV5-2P06315 115 aa16.54■□□□□ 0.24
COL16A1-202ENST00000373668 CNTROBQ8N137 903 aa16.54■□□□□ 0.24
COL16A1-202ENST00000373668 KIAA2012Q0VF49 1180 aa16.53■□□□□ 0.24
COL16A1-202ENST00000373668 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
COL16A1-202ENST00000373668 HLFQ16534 295 aa16.53■□□□□ 0.24
COL16A1-202ENST00000373668 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
COL16A1-202ENST00000373668 ATG3Q9NT62 314 aa16.53■□□□□ 0.24
COL16A1-202ENST00000373668 GNPATO15228 680 aa16.53■□□□□ 0.24
COL16A1-202ENST00000373668 KIF2CQ99661 725 aa16.53■□□□□ 0.24
COL16A1-202ENST00000373668 SYAP1Q96A49 352 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-202ENST00000373668 CWC22Q9HCG8 908 aaKnown RBP16.52■□□□□ 0.24
COL16A1-202ENST00000373668 SRCAPQ6ZRS2 3230 aa16.52■□□□□ 0.24
COL16A1-202ENST00000373668 GOLIM4O00461 696 aa16.52■□□□□ 0.24
COL16A1-202ENST00000373668 MEGF6O75095 1541 aa16.52■□□□□ 0.23
COL16A1-202ENST00000373668 OFD1O75665 1012 aa16.52■□□□□ 0.23
COL16A1-202ENST00000373668 SLC4A8Q2Y0W8 1093 aa16.52■□□□□ 0.23
COL16A1-202ENST00000373668 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.23
COL16A1-202ENST00000373668 QTRT2Q9H974 415 aaKnown RBP16.52■□□□□ 0.23
COL16A1-202ENST00000373668 GDPD2Q9HCC8 539 aa16.52■□□□□ 0.23
COL16A1-202ENST00000373668 GOLGB1Q14789 3259 aaKnown RBP16.51■□□□□ 0.23
COL16A1-202ENST00000373668 ZPR1O75312 459 aa16.51■□□□□ 0.23
COL16A1-202ENST00000373668 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
COL16A1-202ENST00000373668 TLR7Q9NYK1 1049 aaKnown RBP16.51■□□□□ 0.23
COL16A1-202ENST00000373668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.51■□□□□ 0.23
COL16A1-202ENST00000373668 ERVV-2B6SEH9 535 aa16.51■□□□□ 0.23
COL16A1-202ENST00000373668 IDH1O75874 414 aaKnown RBP16.51■□□□□ 0.23
COL16A1-202ENST00000373668 HSP90B1P14625 803 aaKnown RBP16.51■□□□□ 0.23
COL16A1-202ENST00000373668 CPA1P15085 419 aa16.51■□□□□ 0.23
COL16A1-202ENST00000373668 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
COL16A1-202ENST00000373668 KIF20BQ96Q89 1820 aa16.51■□□□□ 0.23
COL16A1-202ENST00000373668 TAF5LO75529 589 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 STK3Q13188 491 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 LOC102724428A0A0B4J2F2 783 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 SIK1P57059 783 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 DBNDD2Q9BQY9 259 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 TRIM37O94972 964 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 LRRC24Q50LG9 513 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 TTC39AQ5SRH9 613 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 CCDC39Q9UFE4 941 aa16.5■□□□□ 0.23
COL16A1-202ENST00000373668 IRS4O14654 1257 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-202ENST00000373668 CSPP1Q1MSJ5 1256 aa16.49■□□□□ 0.23
COL16A1-202ENST00000373668 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
COL16A1-202ENST00000373668 USP26Q9BXU7 913 aa16.49■□□□□ 0.23
COL16A1-202ENST00000373668 SHPRHQ149N8 1683 aa16.49■□□□□ 0.23
COL16A1-202ENST00000373668 MARCH10Q8NA82 808 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-202ENST00000373668 LMBRD1Q9NUN5 540 aa16.49■□□□□ 0.23
COL16A1-202ENST00000373668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.49■□□□□ 0.232e-9■■■■□ 23.1
COL16A1-202ENST00000373668 KIF24Q5T7B8 1368 aa16.49■□□□□ 0.23
COL16A1-202ENST00000373668 EAF2Q96CJ1 260 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-202ENST00000373668 ECHDC1Q9NTX5 307 aa16.49■□□□□ 0.23
COL16A1-202ENST00000373668 MTMR7Q9Y216 660 aa16.49■□□□□ 0.23
COL16A1-202ENST00000373668 PPP1R9BQ96SB3 815 aa16.48■□□□□ 0.23
COL16A1-202ENST00000373668 CCNL1Q9UK58 526 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-202ENST00000373668 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
COL16A1-202ENST00000373668 ADAMTSL3P82987 1691 aa16.47■□□□□ 0.23
COL16A1-202ENST00000373668 MBD3O95983 291 aa16.47■□□□□ 0.23
COL16A1-202ENST00000373668 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-202ENST00000373668 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
COL16A1-202ENST00000373668 CHGBP05060 677 aa16.46■□□□□ 0.23
COL16A1-202ENST00000373668 RFC4P35249 363 aa16.46■□□□□ 0.23
COL16A1-202ENST00000373668 DDIT3P35638 169 aa16.46■□□□□ 0.23
COL16A1-202ENST00000373668 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.23
COL16A1-202ENST00000373668 HOXB7P09629 217 aa16.46■□□□□ 0.23
COL16A1-202ENST00000373668 IFIT1P09914 478 aaKnown RBP16.46■□□□□ 0.23
COL16A1-202ENST00000373668 CRKLP46109 303 aaKnown RBP16.46■□□□□ 0.23
COL16A1-202ENST00000373668 BABAM1Q9NWV8 329 aa16.46■□□□□ 0.23
COL16A1-202ENST00000373668 SRP68Q9UHB9 627 aaKnown RBP16.46■□□□□ 0.23
COL16A1-202ENST00000373668 GLRX3O76003 335 aaKnown RBP16.46■□□□□ 0.23
COL16A1-202ENST00000373668 CCDC129Q6ZRS4 1044 aa16.46■□□□□ 0.23
COL16A1-202ENST00000373668 AK7Q96M32 723 aa16.46■□□□□ 0.23
COL16A1-202ENST00000373668 PRDM10Q9NQV6 1147 aa16.46■□□□□ 0.23
COL16A1-202ENST00000373668 PDIA6Q15084 440 aa16.45■□□□□ 0.22
COL16A1-202ENST00000373668 BCL11BQ9C0K0 894 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-202ENST00000373668 ADCY9O60503 1353 aa16.45■□□□□ 0.22
COL16A1-202ENST00000373668 HAND2P61296 217 aa16.45■□□□□ 0.22
COL16A1-202ENST00000373668 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
COL16A1-202ENST00000373668 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-202ENST00000373668 LRRC2Q9BYS8 371 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms