RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PRDM16Q9HAZ2 1276 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 CHPF2Q9P2E5 772 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 TRIM6-TRIM34B2RNG4 842 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 CLSTN1O94985 981 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 CCT4P50991 539 aaKnown RBP7.8□□□□□ -1.16
CHD6-202ENST00000373222 TAF7Q15545 349 aaPredicted RBP7.8□□□□□ -1.16
CHD6-202ENST00000373222 ZNF467Q7Z7K2 595 aaPredicted RBP7.8□□□□□ -1.16
CHD6-202ENST00000373222 ZNF526Q8TF50 670 aaPredicted RBP7.8□□□□□ -1.16
CHD6-202ENST00000373222 PCDHB8Q9UN66 801 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 PHF8Q9UPP1 1060 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 RGPD5Q99666 1765 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 PXDNQ92626 1479 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 DDX11L8A8MPP1 907 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 PROSER3Q2NL68 480 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 FOXD4L6Q3SYB3 417 aaPredicted RBP7.8□□□□□ -1.16
CHD6-202ENST00000373222 CCDC30Q5VVM6 783 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 FOXD4L3Q6VB84 417 aaPredicted RBP7.8□□□□□ -1.16
CHD6-202ENST00000373222 LARP6Q9BRS8 491 aaKnown RBP7.8□□□□□ -1.16
CHD6-202ENST00000373222 MFRPQ9BY79 579 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 ZDHHC9Q9Y397 364 aa7.8□□□□□ -1.16
CHD6-202ENST00000373222 CHD2O14647 1828 aaKnown RBP7.8□□□□□ -1.16
CHD6-202ENST00000373222 BAG4O95429 457 aaKnown RBP7.79□□□□□ -1.16
CHD6-202ENST00000373222 MX1P20591 662 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 MCTP1Q6DN14 999 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 MRRFQ96E11 262 aaKnown RBP7.79□□□□□ -1.16
CHD6-202ENST00000373222 UPF3BQ9BZI7 483 aaKnown RBP7.79□□□□□ -1.16
CHD6-202ENST00000373222 LRRCC1Q9C099 1032 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 GRPEL1Q9HAV7 217 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 SOS1Q07889 1333 aaPredicted RBP7.79□□□□□ -1.16
CHD6-202ENST00000373222 PI4KAP2A4QPH2 592 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 HMMRO75330 724 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 RABEP1Q15276 862 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 PPP1R42Q7Z4L9 355 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 ANKRD13AQ8IZ07 590 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 PI4KAP1Q8N8J0 262 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 DDX17Q92841 729 aaKnown RBP7.79□□□□□ -1.16
CHD6-202ENST00000373222 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.79□□□□□ -1.16
CHD6-202ENST00000373222 ERBB4Q15303 1308 aa7.79□□□□□ -1.16
CHD6-202ENST00000373222 IBTKQ9P2D0 1353 aaPredicted RBP7.79□□□□□ -1.16
CHD6-202ENST00000373222 ERC2O15083 957 aa7.78□□□□□ -1.16
CHD6-202ENST00000373222 PBX2P40425 430 aa7.78□□□□□ -1.16
CHD6-202ENST00000373222 NEK4P51957 841 aa7.78□□□□□ -1.16
CHD6-202ENST00000373222 ATP8B2P98198 1209 aa7.78□□□□□ -1.16
CHD6-202ENST00000373222 L1TD1Q5T7N2 865 aaKnown RBP7.78□□□□□ -1.16
CHD6-202ENST00000373222 ANO2Q9NQ90 1003 aa7.78□□□□□ -1.16
CHD6-202ENST00000373222 NSFL1CQ9UNZ2 370 aaKnown RBP7.78□□□□□ -1.16
CHD6-202ENST00000373222 AXIN2Q9Y2T1 843 aa7.78□□□□□ -1.16
CHD6-202ENST00000373222 NFAT5O94916 1531 aa7.78□□□□□ -1.16
CHD6-202ENST00000373222 UBTFL1P0CB47 393 aaPredicted RBP7.78□□□□□ -1.16
CHD6-202ENST00000373222 EIF4A1P60842 406 aaKnown RBP7.78□□□□□ -1.16
CHD6-202ENST00000373222 PSME1Q06323 249 aa7.78□□□□□ -1.16
CHD6-202ENST00000373222 GBP4Q96PP9 640 aa7.78□□□□□ -1.16
CHD6-202ENST00000373222 ESYT1Q9BSJ8 1104 aa7.78□□□□□ -1.16
CHD6-202ENST00000373222 RBM27Q9P2N5 1060 aaKnown RBP7.78□□□□□ -1.16
CHD6-202ENST00000373222 N4BP2Q86UW6 1770 aaPredicted RBP7.77□□□□□ -1.16
CHD6-202ENST00000373222 SURF6O75683 361 aaKnown RBP7.77□□□□□ -1.17
CHD6-202ENST00000373222 NCLP19338 710 aaKnown RBP7.77□□□□□ -1.17
CHD6-202ENST00000373222 CHMLP26374 656 aa7.77□□□□□ -1.17
CHD6-202ENST00000373222 FAM43AQ8N2R8 423 aa7.77□□□□□ -1.17
CHD6-202ENST00000373222 DRC1Q96MC2 740 aa7.77□□□□□ -1.17
CHD6-202ENST00000373222 OSBPL3Q9H4L5 887 aa7.77□□□□□ -1.17
CHD6-202ENST00000373222 SRGAP3O43295 1099 aa7.77□□□□□ -1.17
CHD6-202ENST00000373222 CYP2E1P05181 493 aaPredicted RBP7.77□□□□□ -1.17
CHD6-202ENST00000373222 PIP4K2AP48426 406 aaPredicted RBP7.77□□□□□ -1.17
CHD6-202ENST00000373222 COL9A3Q14050 684 aaPredicted RBP7.77□□□□□ -1.17
CHD6-202ENST00000373222 SKIV2LQ15477 1246 aaKnown RBP7.77□□□□□ -1.17
CHD6-202ENST00000373222 CWF19L2Q2TBE0 894 aaKnown RBP7.77□□□□□ -1.17
CHD6-202ENST00000373222 GPR153Q6NV75 609 aa7.77□□□□□ -1.17
CHD6-202ENST00000373222 ZNF530Q6P9A1 599 aaPredicted RBP7.77□□□□□ -1.17
CHD6-202ENST00000373222 IP6K1Q92551 441 aa7.77□□□□□ -1.17
CHD6-202ENST00000373222 PA2G4Q9UQ80 394 aaKnown RBP7.77□□□□□ -1.17
CHD6-202ENST00000373222 DDX49Q9Y6V7 483 aaKnown RBP7.77□□□□□ -1.17
CHD6-202ENST00000373222 CEMIPQ8WUJ3 1361 aa7.77□□□□□ -1.17
CHD6-202ENST00000373222 KDM3BQ7LBC6 1761 aa7.77□□□□□ -1.17
CHD6-202ENST00000373222 ANKARQ7Z5J8 1434 aa7.77□□□□□ -1.17
CHD6-202ENST00000373222 GNAI3P08754 354 aa7.76□□□□□ -1.17
CHD6-202ENST00000373222 CPA1P15085 419 aa7.76□□□□□ -1.17
CHD6-202ENST00000373222 CAVIN1Q6NZI2 390 aaKnown RBP7.76□□□□□ -1.17
CHD6-202ENST00000373222 DDX54Q8TDD1 881 aaKnown RBP7.76□□□□□ -1.17
CHD6-202ENST00000373222 TMX3Q96JJ7 454 aa7.76□□□□□ -1.17
CHD6-202ENST00000373222 ADCY9O60503 1353 aa7.76□□□□□ -1.17
CHD6-202ENST00000373222 BTBD11A6QL63 1104 aa7.76□□□□□ -1.17
CHD6-202ENST00000373222 REC8O95072 547 aa7.76□□□□□ -1.17
CHD6-202ENST00000373222 CASC1Q6TDU7 716 aa7.76□□□□□ -1.17
CHD6-202ENST00000373222 LMBRD1Q9NUN5 540 aa7.76□□□□□ -1.17
CHD6-202ENST00000373222 USP54Q70EL1 1684 aa7.76□□□□□ -1.17
CHD6-202ENST00000373222 HTATSF1O43719 755 aaKnown RBP7.75□□□□□ -1.17
CHD6-202ENST00000373222 PRPF40AO75400 957 aaKnown RBP7.75□□□□□ -1.17
CHD6-202ENST00000373222 PYGBP11216 843 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 MRE11P49959 708 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 ZC3H6P61129 1189 aaKnown RBP7.75□□□□□ -1.17
CHD6-202ENST00000373222 SLC39A6Q13433 755 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 BEND3Q5T5X7 828 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 IFFO2Q5TF58 517 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 GPT2Q8TD30 523 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 SSH3Q8TE77 659 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 JARID2Q92833 1246 aaPredicted RBP7.75□□□□□ -1.17
CHD6-202ENST00000373222 SRCIN1Q9C0H9 1055 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 GDPD2Q9HCC8 539 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 SPG7Q9UQ90 795 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms