RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 FLT4P35916 1363 aa28.22■■■□□ 2.11
CCND3-202ENST00000372988 ZKSCAN1P17029 563 aaPredicted RBP28.22■■■□□ 2.11
CCND3-202ENST00000372988 CREB3L3Q68CJ9 461 aa28.22■■■□□ 2.11
CCND3-202ENST00000372988 DDX54Q8TDD1 881 aaKnown RBP28.22■■■□□ 2.11
CCND3-202ENST00000372988 BABAM1Q9NWV8 329 aa28.22■■■□□ 2.11
CCND3-202ENST00000372988 GNAT3A8MTJ3 354 aa28.22■■■□□ 2.11
CCND3-202ENST00000372988 NBPF7P0C2Y1 421 aaPredicted RBP28.22■■■□□ 2.11
CCND3-202ENST00000372988 RBM6P78332 1123 aaKnown RBP28.22■■■□□ 2.11
CCND3-202ENST00000372988 DNAJC25Q9H1X3 360 aa28.22■■■□□ 2.11
CCND3-202ENST00000372988 FAM53CQ9NYF3 392 aa28.22■■■□□ 2.11
CCND3-202ENST00000372988 GOLGA6L4A6NEF3 574 aa28.21■■■□□ 2.11
CCND3-202ENST00000372988 RBM8AQ9Y5S9 174 aaKnown RBP28.21■■■□□ 2.11
CCND3-202ENST00000372988 NR1I2O75469 434 aa28.21■■■□□ 2.11
CCND3-202ENST00000372988 CAVIN2O95810 425 aa28.21■■■□□ 2.11
CCND3-202ENST00000372988 SARM1Q6SZW1 724 aa28.21■■■□□ 2.11
CCND3-202ENST00000372988 ZNF397Q8NF99 534 aaPredicted RBP28.21■■■□□ 2.11
CCND3-202ENST00000372988 LRRC8AQ8IWT6 810 aa28.2■■■□□ 2.1
CCND3-202ENST00000372988 TFIP11Q9UBB9 837 aaKnown RBP28.2■■■□□ 2.1
CCND3-202ENST00000372988 SOX12O15370 315 aa28.19■■■□□ 2.1
CCND3-202ENST00000372988 PGBD1Q96JS3 809 aa28.19■■■□□ 2.1
CCND3-202ENST00000372988 TERF2Q15554 542 aa28.19■■■□□ 2.1
CCND3-202ENST00000372988 NYAP1Q6ZVC0 841 aa28.19■■■□□ 2.1
CCND3-202ENST00000372988 MAP4K1Q92918 833 aa28.19■■■□□ 2.1
CCND3-202ENST00000372988 ALDH8A1Q9H2A2 487 aaPredicted RBP28.19■■■□□ 2.1
CCND3-202ENST00000372988 ECHDC1Q9NTX5 307 aa28.19■■■□□ 2.1
CCND3-202ENST00000372988 NEMFO60524 1076 aa28.18■■■□□ 2.1
CCND3-202ENST00000372988 COL9A3Q14050 684 aaPredicted RBP28.18■■■□□ 2.1
CCND3-202ENST00000372988 KMT5BQ4FZB7 885 aa28.18■■■□□ 2.1
CCND3-202ENST00000372988 HDGFL1Q5TGJ6 251 aa28.18■■■□□ 2.1
CCND3-202ENST00000372988 KRT222Q8N1A0 295 aa28.18■■■□□ 2.1
CCND3-202ENST00000372988 IL17REQ8NFR9 667 aa28.18■■■□□ 2.1
CCND3-202ENST00000372988 IQCB1Q15051 598 aa28.18■■■□□ 2.1
CCND3-202ENST00000372988 TAF7Q15545 349 aaPredicted RBP28.18■■■□□ 2.1
CCND3-202ENST00000372988 LARP1Q6PKG0 1096 aaKnown RBP28.18■■■□□ 2.1
CCND3-202ENST00000372988 PSMA5P28066 241 aa28.17■■■□□ 2.1
CCND3-202ENST00000372988 MRFAP1L1Q96HT8 127 aa28.17■■■□□ 2.1
CCND3-202ENST00000372988 SLC27A2O14975 620 aa28.16■■■□□ 2.1
CCND3-202ENST00000372988 BEND3Q5T5X7 828 aa28.16■■■□□ 2.1
CCND3-202ENST00000372988 EVI5LQ96CN4 794 aa28.16■■■□□ 2.1
CCND3-202ENST00000372988 SNRKQ9NRH2 765 aa28.16■■■□□ 2.1
CCND3-202ENST00000372988 USP27XA6NNY8 438 aa28.16■■■□□ 2.1
CCND3-202ENST00000372988 GIGYF1O75420 1035 aaPredicted RBP28.16■■■□□ 2.1
CCND3-202ENST00000372988 ANKRD1Q15327 319 aa28.16■■■□□ 2.1
CCND3-202ENST00000372988 ZNF215Q9UL58 517 aaPredicted RBP28.16■■■□□ 2.1
CCND3-202ENST00000372988 FGD1P98174 961 aa28.15■■■□□ 2.1
CCND3-202ENST00000372988 CLASRPQ8N2M8 674 aaKnown RBP28.15■■■□□ 2.1
CCND3-202ENST00000372988 ZNF592Q92610 1267 aa28.15■■■□□ 2.1
CCND3-202ENST00000372988 ROBO2Q9HCK4 1378 aa28.15■■■□□ 2.1
CCND3-202ENST00000372988 MTX1Q13505 466 aa28.14■■■□□ 2.1
CCND3-202ENST00000372988 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.13■■■□□ 2.09
CCND3-202ENST00000372988 OS9Q13438 667 aaPredicted RBP28.13■■■□□ 2.09
CCND3-202ENST00000372988 BICD2Q8TD16 824 aa28.13■■■□□ 2.09
CCND3-202ENST00000372988 TOB2Q14106 344 aaPredicted RBP28.13■■■□□ 2.09
CCND3-202ENST00000372988 ARID5BQ14865 1188 aa28.13■■■□□ 2.09
CCND3-202ENST00000372988 PTPN14Q15678 1187 aa28.13■■■□□ 2.09
CCND3-202ENST00000372988 SLFNL1Q499Z3 407 aa28.13■■■□□ 2.09
CCND3-202ENST00000372988 ERO1AQ96HE7 468 aa28.13■■■□□ 2.09
CCND3-202ENST00000372988 NPHP4O75161 1426 aaPredicted RBP28.13■■■□□ 2.09
CCND3-202ENST00000372988 RPS6KB1P23443 525 aa28.12■■■□□ 2.09
CCND3-202ENST00000372988 GPATCH3Q96I76 525 aa28.12■■■□□ 2.09
CCND3-202ENST00000372988 KCND1Q9NSA2 647 aa28.12■■■□□ 2.09
CCND3-202ENST00000372988 BLOC1S2Q6QNY1 142 aa28.12■■■□□ 2.09
CCND3-202ENST00000372988 FAM227BQ96M60 508 aa28.12■■■□□ 2.09
CCND3-202ENST00000372988 ADCY9O60503 1353 aa28.11■■■□□ 2.09
CCND3-202ENST00000372988 ERBB3P21860 1342 aa28.11■■■□□ 2.09
CCND3-202ENST00000372988 KCNJ4P48050 445 aa28.11■■■□□ 2.09
CCND3-202ENST00000372988 NMIQ13287 307 aaPredicted RBP28.11■■■□□ 2.09
CCND3-202ENST00000372988 DNAAF4Q8WXU2 420 aa28.11■■■□□ 2.09
CCND3-202ENST00000372988 RESTQ13127 1097 aa28.1■■■□□ 2.09
CCND3-202ENST00000372988 TMEM51Q9NW97 253 aa28.1■■■□□ 2.09
CCND3-202ENST00000372988 GOLGA6L19H0YKK7 550 aa28.1■■■□□ 2.09
CCND3-202ENST00000372988 HIP1O00291 1037 aa28.1■■■□□ 2.09
CCND3-202ENST00000372988 SKILP12757 684 aa28.1■■■□□ 2.09
CCND3-202ENST00000372988 CCZ1BP86790 482 aa28.1■■■□□ 2.09
CCND3-202ENST00000372988 CCZ1P86791 482 aaPredicted RBP28.1■■■□□ 2.09
CCND3-202ENST00000372988 FBXO38Q6PIJ6 1188 aa28.1■■■□□ 2.09
CCND3-202ENST00000372988 C11orf57Q6ZUT1 292 aaPredicted RBP28.1■■■□□ 2.09
CCND3-202ENST00000372988 GTF2E1P29083 439 aaPredicted RBP28.09■■■□□ 2.09
CCND3-202ENST00000372988 AMPHP49418 695 aa28.09■■■□□ 2.09
CCND3-202ENST00000372988 TCEANC2Q96MN5 208 aa28.09■■■□□ 2.09
CCND3-202ENST00000372988 NWD1Q149M9 1564 aa28.08■■■□□ 2.09
CCND3-202ENST00000372988 IFIT2P09913 472 aaKnown RBP28.08■■■□□ 2.09
CCND3-202ENST00000372988 PTPRUQ92729 1446 aa28.08■■■□□ 2.09
CCND3-202ENST00000372988 CCAR2Q8N163 923 aaKnown RBP28.07■■■□□ 2.08
CCND3-202ENST00000372988 TAF6LQ9Y6J9 622 aa28.07■■■□□ 2.08
CCND3-202ENST00000372988 PI4KAP2A4QPH2 592 aa28.07■■■□□ 2.08
CCND3-202ENST00000372988 CCDC69A6NI79 296 aa28.07■■■□□ 2.08
CCND3-202ENST00000372988 FAM193AP78312 1265 aa28.07■■■□□ 2.08
CCND3-202ENST00000372988 RNF20Q5VTR2 975 aa28.07■■■□□ 2.08
CCND3-202ENST00000372988 PI4KAP1Q8N8J0 262 aa28.07■■■□□ 2.08
CCND3-202ENST00000372988 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.07■■■□□ 2.08
CCND3-202ENST00000372988 V9GYY5 206 aaPredicted RBP28.07■■■□□ 2.08
CCND3-202ENST00000372988 AGLP35573 1532 aa28.07■■■□□ 2.08
CCND3-202ENST00000372988 CCDC66A2RUB6 948 aa28.06■■■□□ 2.08
CCND3-202ENST00000372988 ELF2Q15723 593 aa28.06■■■□□ 2.08
CCND3-202ENST00000372988 STX1AQ16623 288 aa28.06■■■□□ 2.08
CCND3-202ENST00000372988 ERC1Q8IUD2 1116 aa28.06■■■□□ 2.08
CCND3-202ENST00000372988 BBXQ8WY36 941 aaPredicted RBP28.06■■■□□ 2.08
CCND3-202ENST00000372988 JCADQ9P266 1359 aa28.06■■■□□ 2.08
CCND3-202ENST00000372988 NUTM2FA1L443 756 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms