RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 STARD3NLO95772 234 aa21.7■■□□□ 1.06
CTSA-204ENST00000372484 FOXO4P98177 505 aa21.7■■□□□ 1.06
CTSA-204ENST00000372484 KIAA1211Q6ZU35 1233 aa21.7■■□□□ 1.06
CTSA-204ENST00000372484 RUFY2Q8WXA3 655 aa21.7■■□□□ 1.06
CTSA-204ENST00000372484 CHMP3Q9Y3E7 222 aa21.7■■□□□ 1.06
CTSA-204ENST00000372484 PHLPP1O60346 1717 aa21.7■■□□□ 1.06
CTSA-204ENST00000372484 RAD50Q92878 1312 aa21.69■■□□□ 1.06
CTSA-204ENST00000372484 ADAMTS2O95450 1211 aa21.69■■□□□ 1.06
CTSA-204ENST00000372484 HSPA4P34932 840 aa21.69■■□□□ 1.06
CTSA-204ENST00000372484 TNPO1Q92973 898 aaKnown RBP21.69■■□□□ 1.06
CTSA-204ENST00000372484 WNK3Q9BYP7 1800 aa21.69■■□□□ 1.06
CTSA-204ENST00000372484 BCL9O00512 1426 aa21.68■■□□□ 1.06
CTSA-204ENST00000372484 TFCP2Q12800 502 aa21.68■■□□□ 1.06
CTSA-204ENST00000372484 IL17RAQ96F46 866 aa21.68■■□□□ 1.06
CTSA-204ENST00000372484 LRP6O75581 1613 aa21.67■■□□□ 1.06
CTSA-204ENST00000372484 SYTL4Q96C24 671 aaPredicted RBP21.67■■□□□ 1.06
CTSA-204ENST00000372484 LSG1Q9H089 658 aaKnown RBP21.67■■□□□ 1.06
CTSA-204ENST00000372484 MCM2P49736 904 aa21.67■■□□□ 1.06
CTSA-204ENST00000372484 TNNI3KQ59H18 835 aa21.67■■□□□ 1.06
CTSA-204ENST00000372484 BOLA2Q9H3K6 86 aa21.67■■□□□ 1.06
CTSA-204ENST00000372484 FPGT-TNNI3KV9GXZ4 949 aa21.67■■□□□ 1.06
CTSA-204ENST00000372484 KIF6Q6ZMV9 814 aa21.66■■□□□ 1.06
CTSA-204ENST00000372484 TCIRG1Q13488 830 aa21.65■■□□□ 1.06
CTSA-204ENST00000372484 GBP4Q96PP9 640 aa21.65■■□□□ 1.06
CTSA-204ENST00000372484 ISCA1Q9BUE6 129 aa21.65■■□□□ 1.06
CTSA-204ENST00000372484 DDX11L8A8MPP1 907 aa21.64■■□□□ 1.06
CTSA-204ENST00000372484 HIP1O00291 1037 aa21.64■■□□□ 1.06
CTSA-204ENST00000372484 ARXQ96QS3 562 aa21.64■■□□□ 1.06
CTSA-204ENST00000372484 CWC22Q9HCG8 908 aaKnown RBP21.64■■□□□ 1.06
CTSA-204ENST00000372484 DBNLQ9UJU6 430 aaKnown RBP21.64■■□□□ 1.06
CTSA-204ENST00000372484 CDCA7Q9BWT1 371 aaPredicted RBP21.64■■□□□ 1.05
CTSA-204ENST00000372484 UPF3BQ9BZI7 483 aaKnown RBP21.64■■□□□ 1.05
CTSA-204ENST00000372484 TMX3Q96JJ7 454 aa21.62■■□□□ 1.05
CTSA-204ENST00000372484 SPATA31A1Q5TZJ5 1347 aa21.62■■□□□ 1.05
CTSA-204ENST00000372484 PRIM1P49642 420 aaKnown RBP21.62■■□□□ 1.05
CTSA-204ENST00000372484 SLC4A9Q96Q91 983 aa21.62■■□□□ 1.05
CTSA-204ENST00000372484 FSD1Q9BTV5 496 aa21.62■■□□□ 1.05
CTSA-204ENST00000372484 NRAPQ86VF7 1730 aa21.62■■□□□ 1.05
CTSA-204ENST00000372484 ATP5JP18859 108 aa21.61■■□□□ 1.05
CTSA-204ENST00000372484 SSFA2P28290 1259 aa21.61■■□□□ 1.05
CTSA-204ENST00000372484 TRIM28Q13263 835 aaKnown RBP21.61■■□□□ 1.05
CTSA-204ENST00000372484 ZGPATQ8N5A5 531 aaKnown RBP21.61■■□□□ 1.05
CTSA-204ENST00000372484 THRAP3Q9Y2W1 955 aaKnown RBP21.61■■□□□ 1.05
CTSA-204ENST00000372484 SNX14Q9Y5W7 946 aa21.61■■□□□ 1.05
CTSA-204ENST00000372484 DOT1LQ8TEK3 1739 aa21.61■■□□□ 1.05
CTSA-204ENST00000372484 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.61■■□□□ 1.05
CTSA-204ENST00000372484 NUTM2BA6NNL0 878 aaPredicted RBP21.61■■□□□ 1.05
CTSA-204ENST00000372484 NUTM2EB1AL46 878 aaPredicted RBP21.61■■□□□ 1.05
CTSA-204ENST00000372484 CYP19A1P11511 503 aaPredicted RBP21.61■■□□□ 1.05
CTSA-204ENST00000372484 NUCB2P80303 420 aa21.61■■□□□ 1.05
CTSA-204ENST00000372484 NUTM2AQ8IVF1 878 aaPredicted RBP21.61■■□□□ 1.05
CTSA-204ENST00000372484 DDB1Q16531 1140 aa21.6■■□□□ 1.05
CTSA-204ENST00000372484 IL27Q8NEV9 243 aa21.6■■□□□ 1.05
CTSA-204ENST00000372484 FAM227BQ96M60 508 aa21.6■■□□□ 1.05
CTSA-204ENST00000372484 MAP3K15Q6ZN16 1313 aa21.6■■□□□ 1.05
CTSA-204ENST00000372484 PIP4K2BP78356 416 aa21.59■■□□□ 1.05
CTSA-204ENST00000372484 PTH1RQ03431 593 aa21.59■■□□□ 1.05
CTSA-204ENST00000372484 NMIQ13287 307 aaPredicted RBP21.59■■□□□ 1.05
CTSA-204ENST00000372484 ATG9AQ7Z3C6 839 aa21.59■■□□□ 1.05
CTSA-204ENST00000372484 DBNDD2Q9BQY9 259 aa21.59■■□□□ 1.05
CTSA-204ENST00000372484 TRAK2O60296 914 aa21.59■■□□□ 1.05
CTSA-204ENST00000372484 NOL8Q76FK4 1167 aaKnown RBP21.59■■□□□ 1.05
CTSA-204ENST00000372484 RASEFQ8IZ41 740 aa21.59■■□□□ 1.05
CTSA-204ENST00000372484 IL15P40933 162 aaPredicted RBP21.58■■□□□ 1.05
CTSA-204ENST00000372484 GIGYF2Q6Y7W6 1299 aaKnown RBP21.58■■□□□ 1.05
CTSA-204ENST00000372484 ZNF594Q96JF6 807 aaPredicted RBP21.58■■□□□ 1.04
CTSA-204ENST00000372484 CCDC171Q6TFL3 1326 aa21.57■■□□□ 1.04
CTSA-204ENST00000372484 PCCAP05165 728 aaPredicted RBP21.57■■□□□ 1.04
CTSA-204ENST00000372484 FAM89AQ96GI7 184 aa21.57■■□□□ 1.04
CTSA-204ENST00000372484 ZBTB1Q9Y2K1 713 aa21.57■■□□□ 1.04
CTSA-204ENST00000372484 A0A0G2JS52 829 aa21.56■■□□□ 1.04
CTSA-204ENST00000372484 EYA2O00167 538 aa21.56■■□□□ 1.04
CTSA-204ENST00000372484 TOM1O60784 492 aa21.56■■□□□ 1.04
CTSA-204ENST00000372484 ZBTB38Q8NAP3 1195 aaPredicted RBP21.56■■□□□ 1.04
CTSA-204ENST00000372484 EDC3Q96F86 508 aaKnown RBP21.56■■□□□ 1.04
CTSA-204ENST00000372484 A0A0D9SFI3 127 aa21.56■■□□□ 1.04
CTSA-204ENST00000372484 CUL4AQ13619 759 aa21.56■■□□□ 1.04
CTSA-204ENST00000372484 HLFQ16534 295 aa21.56■■□□□ 1.04
CTSA-204ENST00000372484 CCDC57Q2TAC2 916 aa21.56■■□□□ 1.04
CTSA-204ENST00000372484 LRRC24Q50LG9 513 aa21.56■■□□□ 1.04
CTSA-204ENST00000372484 NEUROD6Q96NK8 337 aa21.56■■□□□ 1.04
CTSA-204ENST00000372484 PKP1Q13835 747 aa21.55■■□□□ 1.04
CTSA-204ENST00000372484 PRPF40BQ6NWY9 871 aaKnown RBP21.55■■□□□ 1.04
CTSA-204ENST00000372484 CLEC17AQ6ZS10 378 aa21.55■■□□□ 1.04
CTSA-204ENST00000372484 GPR108Q9NPR9 543 aa21.55■■□□□ 1.04
CTSA-204ENST00000372484 CCDC9Q9Y3X0 531 aaKnown RBP21.55■■□□□ 1.04
CTSA-204ENST00000372484 SPATA31A5Q5VU36 1347 aa21.55■■□□□ 1.04
CTSA-204ENST00000372484 SPATA31A7Q8IWB4 1347 aa21.55■■□□□ 1.04
CTSA-204ENST00000372484 CIAO1O76071 339 aa21.55■■□□□ 1.04
CTSA-204ENST00000372484 CYP2E1P05181 493 aaPredicted RBP21.55■■□□□ 1.04
CTSA-204ENST00000372484 HSP90AB3PQ58FF7 597 aa21.55■■□□□ 1.04
CTSA-204ENST00000372484 DNAJC2Q99543 621 aaKnown RBP21.55■■□□□ 1.04
CTSA-204ENST00000372484 SNRKQ9NRH2 765 aa21.55■■□□□ 1.04
CTSA-204ENST00000372484 GPTP24298 496 aa21.54■■□□□ 1.04
CTSA-204ENST00000372484 KCNJ4P48050 445 aa21.54■■□□□ 1.04
CTSA-204ENST00000372484 HAUS7Q99871 368 aa21.54■■□□□ 1.04
CTSA-204ENST00000372484 NDUFB9Q9Y6M9 179 aa21.54■■□□□ 1.04
CTSA-204ENST00000372484 NWD2Q9ULI1 1742 aa21.54■■□□□ 1.04
CTSA-204ENST00000372484 TIMM10P62072 90 aa21.53■■□□□ 1.04
CTSA-204ENST00000372484 NECTIN1Q15223 517 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms