RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 FOXO4P98177 505 aa30.5■■■□□ 2.47
CTSA-203ENST00000372459 LMBR1LQ6UX01 489 aa30.5■■■□□ 2.47
CTSA-203ENST00000372459 NGLY1Q96IV0 654 aa30.5■■■□□ 2.47
CTSA-203ENST00000372459 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.5■■■□□ 2.47
CTSA-203ENST00000372459 TRIM28Q13263 835 aaKnown RBP30.5■■■□□ 2.47
CTSA-203ENST00000372459 MAP3K15Q6ZN16 1313 aa30.5■■■□□ 2.47
CTSA-203ENST00000372459 ACSBG1Q96GR2 724 aa30.48■■■□□ 2.47
CTSA-203ENST00000372459 VPS72Q15906 364 aa30.48■■■□□ 2.47
CTSA-203ENST00000372459 EAF2Q96CJ1 260 aaPredicted RBP30.48■■■□□ 2.47
CTSA-203ENST00000372459 A0A0G2JS52 829 aa30.47■■■□□ 2.47
CTSA-203ENST00000372459 MAP4K4O95819 1239 aaPredicted RBP30.47■■■□□ 2.47
CTSA-203ENST00000372459 BCL9LQ86UU0 1499 aa30.47■■■□□ 2.47
CTSA-203ENST00000372459 GIGYF2Q6Y7W6 1299 aaKnown RBP30.46■■■□□ 2.47
CTSA-203ENST00000372459 ARXQ96QS3 562 aa30.46■■■□□ 2.47
CTSA-203ENST00000372459 SLKQ9H2G2 1235 aaPredicted RBP30.46■■■□□ 2.47
CTSA-203ENST00000372459 ZBTB1Q9Y2K1 713 aa30.46■■■□□ 2.47
CTSA-203ENST00000372459 RABEP1Q15276 862 aa30.46■■■□□ 2.47
CTSA-203ENST00000372459 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.46■■■□□ 2.47
CTSA-203ENST00000372459 CHMP3Q9Y3E7 222 aa30.45■■■□□ 2.47
CTSA-203ENST00000372459 SPATA31A6Q5VVP1 1343 aa30.45■■■□□ 2.46
CTSA-203ENST00000372459 HSP90AB3PQ58FF7 597 aa30.45■■■□□ 2.46
CTSA-203ENST00000372459 IL6STP40189 918 aaPredicted RBP30.44■■■□□ 2.46
CTSA-203ENST00000372459 FAM98CQ17RN3 349 aaKnown RBP30.44■■■□□ 2.46
CTSA-203ENST00000372459 CCDC8Q9H0W5 538 aaPredicted RBP30.44■■■□□ 2.46
CTSA-203ENST00000372459 FNBP4Q8N3X1 1017 aaPredicted RBP30.43■■■□□ 2.46
CTSA-203ENST00000372459 ANTXR1Q9H6X2 564 aa30.43■■■□□ 2.46
CTSA-203ENST00000372459 PCCAP05165 728 aaPredicted RBP30.41■■■□□ 2.46
CTSA-203ENST00000372459 EPB41L2O43491 1005 aaKnown RBP30.41■■■□□ 2.46
CTSA-203ENST00000372459 ANO2Q9NQ90 1003 aa30.4■■■□□ 2.46
CTSA-203ENST00000372459 MCCP23508 829 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 ATP6V1AP38606 617 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 TFCP2Q12800 502 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 NFKBIBQ15653 356 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 HLFQ16534 295 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 ZBTB38Q8NAP3 1195 aaPredicted RBP30.39■■■□□ 2.46
CTSA-203ENST00000372459 EVI5LQ96CN4 794 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 TLR7Q9NYK1 1049 aaKnown RBP30.39■■■□□ 2.46
CTSA-203ENST00000372459 LOC102724428A0A0B4J2F2 783 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 ERVV-1B6SEH8 477 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 SIK1P57059 783 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 TNNI3KQ59H18 835 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 SPRYD3Q8NCJ5 442 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 FPGT-TNNI3KV9GXZ4 949 aa30.39■■■□□ 2.46
CTSA-203ENST00000372459 SMARCC1Q92922 1105 aaPredicted RBP30.38■■■□□ 2.45
CTSA-203ENST00000372459 DZIP3Q86Y13 1208 aaKnown RBP30.37■■■□□ 2.45
CTSA-203ENST00000372459 ANKRD36CQ5JPF3 1778 aa30.37■■■□□ 2.45
CTSA-203ENST00000372459 PALLDQ8WX93 1383 aa30.37■■■□□ 2.45
CTSA-203ENST00000372459 K7ELQ4 463 aaPredicted RBP30.37■■■□□ 2.45
CTSA-203ENST00000372459 PLA2G12BQ9BX93 195 aa30.37■■■□□ 2.45
CTSA-203ENST00000372459 CICQ96RK0 1608 aaPredicted RBP30.37■■■□□ 2.45
CTSA-203ENST00000372459 CD2BP2O95400 341 aaKnown RBP30.36■■■□□ 2.45
CTSA-203ENST00000372459 CERKQ8TCT0 537 aa30.36■■■□□ 2.45
CTSA-203ENST00000372459 CCDC87Q9NVE4 849 aa30.36■■■□□ 2.45
CTSA-203ENST00000372459 SGSM2O43147 1006 aa30.35■■■□□ 2.45
CTSA-203ENST00000372459 NLRP10Q86W26 655 aa30.35■■■□□ 2.45
CTSA-203ENST00000372459 USP21Q9UK80 565 aa30.35■■■□□ 2.45
CTSA-203ENST00000372459 FAM89AQ96GI7 184 aa30.35■■■□□ 2.45
CTSA-203ENST00000372459 IL15P40933 162 aaPredicted RBP30.34■■■□□ 2.45
CTSA-203ENST00000372459 EIF5P55010 431 aaKnown RBP30.34■■■□□ 2.45
CTSA-203ENST00000372459 INTS5Q6P9B9 1019 aaKnown RBP30.34■■■□□ 2.45
CTSA-203ENST00000372459 DIAPH3Q9NSV4 1193 aa30.34■■■□□ 2.45
CTSA-203ENST00000372459 CDHR2Q9BYE9 1310 aa30.34■■■□□ 2.45
CTSA-203ENST00000372459 GPTP24298 496 aa30.34■■■□□ 2.45
CTSA-203ENST00000372459 CRKLP46109 303 aaKnown RBP30.34■■■□□ 2.45
CTSA-203ENST00000372459 RUFY2Q8WXA3 655 aa30.34■■■□□ 2.45
CTSA-203ENST00000372459 ATG9AQ7Z3C6 839 aa30.33■■■□□ 2.45
CTSA-203ENST00000372459 IL25Q9H293 177 aa30.33■■■□□ 2.45
CTSA-203ENST00000372459 TBC1D2BQ9UPU7 963 aa30.33■■■□□ 2.45
CTSA-203ENST00000372459 NUP98P52948 1817 aa30.33■■■□□ 2.45
CTSA-203ENST00000372459 KCNQ2O43526 872 aa30.32■■■□□ 2.44
CTSA-203ENST00000372459 CIAO1O76071 339 aa30.32■■■□□ 2.44
CTSA-203ENST00000372459 ANAPC15P60006 121 aa30.32■■■□□ 2.44
CTSA-203ENST00000372459 CCDC57Q2TAC2 916 aa30.32■■■□□ 2.44
CTSA-203ENST00000372459 DBNLQ9UJU6 430 aaKnown RBP30.32■■■□□ 2.44
CTSA-203ENST00000372459 EYA2O00167 538 aa30.32■■■□□ 2.44
CTSA-203ENST00000372459 ST18O60284 1047 aa30.32■■■□□ 2.44
CTSA-203ENST00000372459 BOLA2Q9H3K6 86 aa30.32■■■□□ 2.44
CTSA-203ENST00000372459 RREB1Q92766 1687 aa30.31■■■□□ 2.44
CTSA-203ENST00000372459 HIP1O00291 1037 aa30.31■■■□□ 2.44
CTSA-203ENST00000372459 CWC27Q6UX04 472 aaKnown RBP30.31■■■□□ 2.44
CTSA-203ENST00000372459 GPR108Q9NPR9 543 aa30.31■■■□□ 2.44
CTSA-203ENST00000372459 ITPK1Q13572 414 aa30.3■■■□□ 2.44
CTSA-203ENST00000372459 CHMP5Q9NZZ3 219 aa30.3■■■□□ 2.44
CTSA-203ENST00000372459 CSF1RP07333 972 aa30.3■■■□□ 2.44
CTSA-203ENST00000372459 ATP5JP18859 108 aa30.3■■■□□ 2.44
CTSA-203ENST00000372459 FBXO3Q9UK99 471 aa30.29■■■□□ 2.44
CTSA-203ENST00000372459 KIAA1211Q6ZU35 1233 aa30.28■■■□□ 2.44
CTSA-203ENST00000372459 ZNF594Q96JF6 807 aaPredicted RBP30.28■■■□□ 2.44
CTSA-203ENST00000372459 RAD50Q92878 1312 aa30.27■■■□□ 2.44
CTSA-203ENST00000372459 HSP90AA1P07900 732 aaKnown RBP30.27■■■□□ 2.44
CTSA-203ENST00000372459 ZNF34Q8IZ26 560 aa30.27■■■□□ 2.44
CTSA-203ENST00000372459 IL17RAQ96F46 866 aa30.27■■■□□ 2.44
CTSA-203ENST00000372459 DBNDD2Q9BQY9 259 aa30.27■■■□□ 2.44
CTSA-203ENST00000372459 LRRC24Q50LG9 513 aa30.26■■■□□ 2.44
CTSA-203ENST00000372459 TRMT112Q9UI30 125 aaKnown RBP30.26■■■□□ 2.44
CTSA-203ENST00000372459 ZNF831Q5JPB2 1677 aa30.26■■■□□ 2.43
CTSA-203ENST00000372459 HSPA4P34932 840 aa30.26■■■□□ 2.43
CTSA-203ENST00000372459 MEX3CQ5U5Q3 659 aaKnown RBP30.26■■■□□ 2.43
CTSA-203ENST00000372459 LSG1Q9H089 658 aaKnown RBP30.26■■■□□ 2.43
CTSA-203ENST00000372459 IFIT5Q13325 482 aaKnown RBP30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms