RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 POLKQ9UBT6 870 aa10.93□□□□□ -0.66
YIPF3-201ENST00000372417 PGAP2Q9UHJ9 254 aa10.93□□□□□ -0.66
YIPF3-201ENST00000372417 COLQQ9Y215 455 aaPredicted RBP10.93□□□□□ -0.66
YIPF3-201ENST00000372417 KLRG2A4D1S0 409 aaPredicted RBP10.92□□□□□ -0.66
YIPF3-201ENST00000372417 ZNF157P51786 506 aaPredicted RBP10.92□□□□□ -0.66
YIPF3-201ENST00000372417 FBXO46Q6PJ61 603 aaPredicted RBP10.92□□□□□ -0.66
YIPF3-201ENST00000372417 NIM1KQ8IY84 436 aa10.92□□□□□ -0.66
YIPF3-201ENST00000372417 ZC3H15Q8WU90 426 aaKnown RBP10.92□□□□□ -0.66
YIPF3-201ENST00000372417 SIN3AQ96ST3 1273 aa10.92□□□□□ -0.66
YIPF3-201ENST00000372417 NUP98P52948 1817 aa10.91□□□□□ -0.66
YIPF3-201ENST00000372417 CAMTA2O94983 1202 aa10.91□□□□□ -0.66
YIPF3-201ENST00000372417 NEUROD1Q13562 356 aa10.91□□□□□ -0.66
YIPF3-201ENST00000372417 NPM2Q86SE8 214 aaKnown RBP10.91□□□□□ -0.66
YIPF3-201ENST00000372417 CSRNP1Q96S65 589 aa10.91□□□□□ -0.66
YIPF3-201ENST00000372417 GBA2Q9HCG7 927 aaPredicted RBP10.91□□□□□ -0.66
YIPF3-201ENST00000372417 CDHR2Q9BYE9 1310 aa10.9□□□□□ -0.66
YIPF3-201ENST00000372417 SLC10A3P09131 477 aa10.9□□□□□ -0.66
YIPF3-201ENST00000372417 IL6STP40189 918 aaPredicted RBP10.9□□□□□ -0.66
YIPF3-201ENST00000372417 CC2D2BQ6DHV5 1058 aa10.9□□□□□ -0.66
YIPF3-201ENST00000372417 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
YIPF3-201ENST00000372417 C2orf69Q8N8R5 385 aa10.9□□□□□ -0.66
YIPF3-201ENST00000372417 ZNF296Q8WUU4 475 aaPredicted RBP10.9□□□□□ -0.66
YIPF3-201ENST00000372417 GMPSP49915 693 aaPredicted RBP10.89□□□□□ -0.67
YIPF3-201ENST00000372417 USP48Q86UV5 1035 aa10.89□□□□□ -0.67
YIPF3-201ENST00000372417 AEBP1Q8IUX7 1158 aa10.89□□□□□ -0.67
YIPF3-201ENST00000372417 LGR6Q9HBX8 967 aa10.89□□□□□ -0.67
YIPF3-201ENST00000372417 NPC1L1Q9UHC9 1359 aa10.89□□□□□ -0.67
YIPF3-201ENST00000372417 HIRAP54198 1017 aaPredicted RBP10.88□□□□□ -0.67
YIPF3-201ENST00000372417 GRIPAP1Q4V328 841 aa10.88□□□□□ -0.67
YIPF3-201ENST00000372417 TTC5Q8N0Z6 440 aa10.88□□□□□ -0.67
YIPF3-201ENST00000372417 TRPM4Q8TD43 1214 aa10.88□□□□□ -0.67
YIPF3-201ENST00000372417 CARD14Q9BXL6 1004 aa10.88□□□□□ -0.67
YIPF3-201ENST00000372417 POTEFA5A3E0 1075 aa10.87□□□□□ -0.67
YIPF3-201ENST00000372417 RNMTO43148 476 aaKnown RBP10.87□□□□□ -0.67
YIPF3-201ENST00000372417 PPIP5K2O43314 1243 aa10.87□□□□□ -0.67
YIPF3-201ENST00000372417 TPTE2Q6XPS3 522 aa10.87□□□□□ -0.67
YIPF3-201ENST00000372417 DZIP3Q86Y13 1208 aaKnown RBP10.87□□□□□ -0.67
YIPF3-201ENST00000372417 BCL2L13Q9BXK5 485 aa10.87□□□□□ -0.67
YIPF3-201ENST00000372417 DDX60Q8IY21 1712 aaKnown RBP10.87□□□□□ -0.67
YIPF3-201ENST00000372417 RANBP2P49792 3224 aaKnown RBP10.86□□□□□ -0.67
YIPF3-201ENST00000372417 PITPNM2Q9BZ72 1349 aa10.86□□□□□ -0.67
YIPF3-201ENST00000372417 MNX1P50219 401 aaPredicted RBP10.86□□□□□ -0.67
YIPF3-201ENST00000372417 CXCL9Q07325 125 aa10.86□□□□□ -0.67
YIPF3-201ENST00000372417 INTS3Q68E01 1043 aaKnown RBP10.86□□□□□ -0.67
YIPF3-201ENST00000372417 DLK2Q6UY11 383 aa10.86□□□□□ -0.67
YIPF3-201ENST00000372417 TEX13AQ9BXU3 409 aaPredicted RBP10.86□□□□□ -0.67
YIPF3-201ENST00000372417 ZNF652Q9Y2D9 606 aa10.86□□□□□ -0.67
YIPF3-201ENST00000372417 HEG1Q9ULI3 1381 aa10.86□□□□□ -0.67
YIPF3-201ENST00000372417 UNC80Q8N2C7 3258 aa10.85□□□□□ -0.67
YIPF3-201ENST00000372417 TBC1D8O95759 1140 aa10.85□□□□□ -0.67
YIPF3-201ENST00000372417 TNNT2P45379 298 aaPredicted RBP10.85□□□□□ -0.67
YIPF3-201ENST00000372417 AOC3Q16853 763 aa10.85□□□□□ -0.67
YIPF3-201ENST00000372417 SULT6B1Q6IMI4 303 aa10.85□□□□□ -0.67
YIPF3-201ENST00000372417 CLEC4GQ6UXB4 293 aa10.85□□□□□ -0.67
YIPF3-201ENST00000372417 KRT26Q7Z3Y9 468 aa10.85□□□□□ -0.67
YIPF3-201ENST00000372417 RASAL3Q86YV0 1011 aa10.85□□□□□ -0.67
YIPF3-201ENST00000372417 ZNRF3Q9ULT6 936 aa10.85□□□□□ -0.67
YIPF3-201ENST00000372417 LAMB2P55268 1798 aa10.85□□□□□ -0.67
YIPF3-201ENST00000372417 FAM177BA6PVY3 158 aa10.84□□□□□ -0.67
YIPF3-201ENST00000372417 GPR25O00155 361 aa10.84□□□□□ -0.67
YIPF3-201ENST00000372417 NOM1Q5C9Z4 860 aaKnown RBP10.84□□□□□ -0.67
YIPF3-201ENST00000372417 H7C1D1 291 aa10.83□□□□□ -0.68
YIPF3-201ENST00000372417 A1BGP04217 495 aa10.83□□□□□ -0.68
YIPF3-201ENST00000372417 GTF2E1P29083 439 aaPredicted RBP10.83□□□□□ -0.68
YIPF3-201ENST00000372417 TNIP1Q15025 636 aa10.83□□□□□ -0.68
YIPF3-201ENST00000372417 CRY2Q49AN0 593 aa10.83□□□□□ -0.68
YIPF3-201ENST00000372417 CDCA8Q53HL2 280 aa10.83□□□□□ -0.68
YIPF3-201ENST00000372417 RPGRQ92834 1020 aaKnown RBP10.83□□□□□ -0.68
YIPF3-201ENST00000372417 ZNF496Q96IT1 587 aaPredicted RBP10.83□□□□□ -0.68
YIPF3-201ENST00000372417 VPS33BQ9H267 617 aa10.83□□□□□ -0.68
YIPF3-201ENST00000372417 CNOT7Q9UIV1 285 aaKnown RBP10.83□□□□□ -0.68
YIPF3-201ENST00000372417 NIP7Q9Y221 180 aaKnown RBP eCLIP10.83□□□□□ -0.68
YIPF3-201ENST00000372417 RIC1Q4ADV7 1423 aa10.83□□□□□ -0.68
YIPF3-201ENST00000372417 TAF1P21675 1872 aa10.83□□□□□ -0.68
YIPF3-201ENST00000372417 LAMB1P07942 1786 aa10.82□□□□□ -0.68
YIPF3-201ENST00000372417 KDM3BQ7LBC6 1761 aa10.82□□□□□ -0.68
YIPF3-201ENST00000372417 ADM5C9JUS6 153 aa10.82□□□□□ -0.68
YIPF3-201ENST00000372417 PPEF1O14829 653 aaPredicted RBP10.82□□□□□ -0.68
YIPF3-201ENST00000372417 FKTNO75072 461 aa10.82□□□□□ -0.68
YIPF3-201ENST00000372417 OTUD5Q96G74 571 aa10.82□□□□□ -0.68
YIPF3-201ENST00000372417 ANKRD36CQ5JPF3 1778 aa10.82□□□□□ -0.68
YIPF3-201ENST00000372417 ABCC12Q96J65 1359 aa10.81□□□□□ -0.68
YIPF3-201ENST00000372417 LAMB4A4D0S4 1761 aa10.81□□□□□ -0.68
YIPF3-201ENST00000372417 SHTN1A0MZ66 631 aa10.81□□□□□ -0.68
YIPF3-201ENST00000372417 TCERG1O14776 1098 aaKnown RBP10.81□□□□□ -0.68
YIPF3-201ENST00000372417 RAD17O75943 681 aa10.81□□□□□ -0.68
YIPF3-201ENST00000372417 EN2P19622 333 aaPredicted RBP10.81□□□□□ -0.68
YIPF3-201ENST00000372417 CHRDL2Q6WN34 429 aa10.81□□□□□ -0.68
YIPF3-201ENST00000372417 MICALL2Q8IY33 904 aa10.81□□□□□ -0.68
YIPF3-201ENST00000372417 DCPSQ96C86 337 aaKnown RBP10.81□□□□□ -0.68
YIPF3-201ENST00000372417 KIF7Q2M1P5 1343 aa10.81□□□□□ -0.68
YIPF3-201ENST00000372417 H0YGN5 161 aa10.8□□□□□ -0.68
YIPF3-201ENST00000372417 HOXA10P31260 410 aaPredicted RBP10.8□□□□□ -0.68
YIPF3-201ENST00000372417 SLC51AQ86UW1 340 aa10.8□□□□□ -0.68
YIPF3-201ENST00000372417 SUPT20HQ8NEM7 779 aa10.8□□□□□ -0.68
YIPF3-201ENST00000372417 TMX4Q9H1E5 349 aaPredicted RBP10.8□□□□□ -0.68
YIPF3-201ENST00000372417 PSME4Q14997 1843 aa10.79□□□□□ -0.68
YIPF3-201ENST00000372417 TBC1D10BQ4KMP7 808 aaPredicted RBP10.79□□□□□ -0.68
YIPF3-201ENST00000372417 ZNF790Q6PG37 636 aa10.79□□□□□ -0.68
YIPF3-201ENST00000372417 SAMD7Q7Z3H4 446 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms