RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 MAGI1Q96QZ7 1491 aaPredicted RBP27.59■■■□□ 2.01
RAPGEF1-203ENST00000372195 AFMP43652 599 aa27.59■■■□□ 2.01
RAPGEF1-203ENST00000372195 PAFAH1B1P43034 410 aa27.58■■■□□ 2.01
RAPGEF1-203ENST00000372195 CCDC40Q4G0X9 1142 aa27.58■■■□□ 2.01
RAPGEF1-203ENST00000372195 ANAPC15P60006 121 aa27.58■■■□□ 2.01
RAPGEF1-203ENST00000372195 LDHAL6AQ6ZMR3 332 aa27.58■■■□□ 2.01
RAPGEF1-203ENST00000372195 GPATCH11Q8N954 259 aa27.57■■■□□ 2
RAPGEF1-203ENST00000372195 ZSCAN22P10073 491 aaPredicted RBP27.57■■■□□ 2
RAPGEF1-203ENST00000372195 CEBPAP49715 358 aaPredicted RBP27.57■■■□□ 2
RAPGEF1-203ENST00000372195 CCDC12Q8WUD4 166 aaPredicted RBP27.57■■■□□ 2
RAPGEF1-203ENST00000372195 JADE2Q9NQC1 790 aa27.57■■■□□ 2
RAPGEF1-203ENST00000372195 PHF8Q9UPP1 1060 aa27.57■■■□□ 2
RAPGEF1-203ENST00000372195 CTR9Q6PD62 1173 aa27.57■■■□□ 2
RAPGEF1-203ENST00000372195 PLB1Q6P1J6 1458 aa27.57■■■□□ 2
RAPGEF1-203ENST00000372195 MYO1BO43795 1136 aa27.57■■■□□ 2
RAPGEF1-203ENST00000372195 CUL5Q93034 780 aa27.57■■■□□ 2
RAPGEF1-203ENST00000372195 VPS36Q86VN1 386 aa27.56■■■□□ 2
RAPGEF1-203ENST00000372195 BRF1Q92994 677 aa27.56■■■□□ 2
RAPGEF1-203ENST00000372195 NOP2P46087 812 aaKnown RBP27.56■■■□□ 2
RAPGEF1-203ENST00000372195 LRSAM1Q6UWE0 723 aa27.56■■■□□ 2
RAPGEF1-203ENST00000372195 RNF41Q9H4P4 317 aaPredicted RBP27.56■■■□□ 2
RAPGEF1-203ENST00000372195 RPGRQ92834 1020 aaKnown RBP27.56■■■□□ 2
RAPGEF1-203ENST00000372195 LMAN1P49257 510 aa27.56■■■□□ 2
RAPGEF1-203ENST00000372195 MFSD6Q6ZSS7 791 aa27.56■■■□□ 2
RAPGEF1-203ENST00000372195 CHPF2Q9P2E5 772 aa27.56■■■□□ 2
RAPGEF1-203ENST00000372195 GSDMDP57764 484 aa27.55■■■□□ 2
RAPGEF1-203ENST00000372195 CWC25Q9NXE8 425 aaPredicted RBP27.55■■■□□ 2
RAPGEF1-203ENST00000372195 TSPY2A6NKD2 308 aa27.55■■■□□ 2
RAPGEF1-203ENST00000372195 GNG11P61952 73 aa27.55■■■□□ 2
RAPGEF1-203ENST00000372195 CCDC91Q7Z6B0 441 aa27.55■■■□□ 2
RAPGEF1-203ENST00000372195 MAATS1Q7Z4T9 603 aa27.55■■■□□ 2
RAPGEF1-203ENST00000372195 INCENPQ9NQS7 918 aa27.54■■■□□ 2
RAPGEF1-203ENST00000372195 FGFR1OPO95684 399 aaKnown RBP27.54■■■□□ 2
RAPGEF1-203ENST00000372195 CETN2P41208 172 aa27.54■■■□□ 2
RAPGEF1-203ENST00000372195 NCOA7Q8NI08 942 aa27.54■■■□□ 2
RAPGEF1-203ENST00000372195 CALML4Q96GE6 196 aa27.54■■■□□ 2
RAPGEF1-203ENST00000372195 FAM107BQ9H098 131 aa27.54■■■□□ 2
RAPGEF1-203ENST00000372195 KLF18A0A0U1RQI7 1052 aa27.54■■■□□ 2
RAPGEF1-203ENST00000372195 RBM25P49756 843 aaKnown RBP27.54■■■□□ 2
RAPGEF1-203ENST00000372195 KLHL40Q2TBA0 621 aa27.54■■■□□ 2
RAPGEF1-203ENST00000372195 SRRTQ9BXP5 876 aaKnown RBP27.54■■■□□ 2
RAPGEF1-203ENST00000372195 RAB34Q9BZG1 259 aa27.54■■■□□ 2
RAPGEF1-203ENST00000372195 IQSEC3Q9UPP2 1182 aaPredicted RBP27.54■■■□□ 2
RAPGEF1-203ENST00000372195 KIF14Q15058 1648 aa27.54■■■□□ 2
RAPGEF1-203ENST00000372195 WDR78Q5VTH9 848 aa27.53■■■□□ 2
RAPGEF1-203ENST00000372195 KAT14Q9H8E8 782 aa27.53■■■□□ 2
RAPGEF1-203ENST00000372195 SPECC1Q5M775 1068 aa27.53■■■□□ 2
RAPGEF1-203ENST00000372195 RHPN1Q8TCX5 695 aa27.53■■■□□ 2
RAPGEF1-203ENST00000372195 CCDC97Q96F63 343 aaPredicted RBP27.53■■■□□ 2
RAPGEF1-203ENST00000372195 MYCNP04198 464 aaPredicted RBP27.52■■■□□ 2
RAPGEF1-203ENST00000372195 IPO4Q8TEX9 1081 aaKnown RBP27.52■■■□□ 2
RAPGEF1-203ENST00000372195 MARCKSP29966 332 aaPredicted RBP27.52■■■□□ 2
RAPGEF1-203ENST00000372195 MCM3P25205 808 aa27.52■■■□□ 2
RAPGEF1-203ENST00000372195 ALS2CR12Q96Q35 445 aa27.52■■■□□ 2
RAPGEF1-203ENST00000372195 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.52■■■□□ 2
RAPGEF1-203ENST00000372195 SMARCC1Q92922 1105 aaPredicted RBP27.51■■■□□ 2
RAPGEF1-203ENST00000372195 C6orf229H3BNL8 230 aa27.51■■□□□ 1.99
RAPGEF1-203ENST00000372195 DRC1Q96MC2 740 aa27.51■■□□□ 1.99
RAPGEF1-203ENST00000372195 IDI1Q13907 227 aa27.51■■□□□ 1.99
RAPGEF1-203ENST00000372195 IQGAP2Q13576 1575 aa27.51■■□□□ 1.99
RAPGEF1-203ENST00000372195 CHRNA2Q15822 529 aa27.51■■□□□ 1.99
RAPGEF1-203ENST00000372195 CALCOCO1Q9P1Z2 691 aa27.51■■□□□ 1.99
RAPGEF1-203ENST00000372195 SCAF11Q99590 1463 aaKnown RBP27.51■■□□□ 1.99
RAPGEF1-203ENST00000372195 UBASH3AP57075 661 aa27.51■■□□□ 1.99
RAPGEF1-203ENST00000372195 PPP4R3AQ6IN85 833 aa27.51■■□□□ 1.99
RAPGEF1-203ENST00000372195 TCP11L1Q9NUJ3 509 aa27.51■■□□□ 1.99
RAPGEF1-203ENST00000372195 PIK3R4Q99570 1358 aa27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 PRC1O43663 620 aa27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 CCDC102BQ68D86 513 aa27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 Q6ZUG5 572 aa27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 CHST3Q7LGC8 479 aa27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 ATP2C2O75185 946 aa27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 V9GYY5 206 aaPredicted RBP27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 NEMFO60524 1076 aa27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 SYKP43405 635 aa27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 DNM1Q05193 864 aaKnown RBP27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 RRAGBQ5VZM2 374 aa27.5■■□□□ 1.99
RAPGEF1-203ENST00000372195 DNAJC25Q9H1X3 360 aa27.49■■□□□ 1.99
RAPGEF1-203ENST00000372195 CTNNA2P26232 953 aa27.49■■□□□ 1.99
RAPGEF1-203ENST00000372195 PUF60Q9UHX1 559 aaKnown RBP27.49■■□□□ 1.99
RAPGEF1-203ENST00000372195 RBM8AQ9Y5S9 174 aaKnown RBP27.49■■□□□ 1.99
RAPGEF1-203ENST00000372195 TRIM47Q96LD4 638 aa27.48■■□□□ 1.99
RAPGEF1-203ENST00000372195 TTF1Q15361 905 aaPredicted RBP27.48■■□□□ 1.99
RAPGEF1-203ENST00000372195 AOPEPQ8N6M6 819 aa27.48■■□□□ 1.99
RAPGEF1-203ENST00000372195 PA2G4Q9UQ80 394 aaKnown RBP27.48■■□□□ 1.99
RAPGEF1-203ENST00000372195 TERF1P54274 439 aa27.48■■□□□ 1.99
RAPGEF1-203ENST00000372195 C8orf58Q8NAV2 365 aa27.48■■□□□ 1.99
RAPGEF1-203ENST00000372195 CC2D2AQ9P2K1 1620 aa27.48■■□□□ 1.99
RAPGEF1-203ENST00000372195 XRCC6P12956 609 aaKnown RBP eCLIP27.48■■□□□ 1.99
RAPGEF1-203ENST00000372195 N4BP3O15049 544 aa27.47■■□□□ 1.99
RAPGEF1-203ENST00000372195 GCOM1H8Y6P7 765 aaPredicted RBP27.47■■□□□ 1.99
RAPGEF1-203ENST00000372195 MYZAPP0CAP1 466 aa27.47■■□□□ 1.99
RAPGEF1-203ENST00000372195 SLC39A6Q13433 755 aa27.47■■□□□ 1.99
RAPGEF1-203ENST00000372195 CCDC186Q7Z3E2 898 aa27.47■■□□□ 1.99
RAPGEF1-203ENST00000372195 ESYT1Q9BSJ8 1104 aa27.47■■□□□ 1.99
RAPGEF1-203ENST00000372195 SAMM50Q9Y512 469 aa27.47■■□□□ 1.99
RAPGEF1-203ENST00000372195 SYCP3Q8IZU3 236 aa27.47■■□□□ 1.99
RAPGEF1-203ENST00000372195 ANKRD24Q8TF21 1146 aa27.47■■□□□ 1.99
RAPGEF1-203ENST00000372195 ACEP12821 1306 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms