RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 FLT4P35916 1363 aa22.76■■□□□ 1.23
LMO4-202ENST00000370544 KIF2AO00139 706 aaPredicted RBP22.76■■□□□ 1.23
LMO4-202ENST00000370544 JAKMIP3Q5VZ66 844 aa22.76■■□□□ 1.23
LMO4-202ENST00000370544 ABCC1P33527 1531 aa22.76■■□□□ 1.23
LMO4-202ENST00000370544 GRM8O00222 908 aa22.76■■□□□ 1.23
LMO4-202ENST00000370544 PDE1AP54750 535 aa22.76■■□□□ 1.23
LMO4-202ENST00000370544 DESP17661 470 aa22.76■■□□□ 1.23
LMO4-202ENST00000370544 PUS7Q96PZ0 661 aaKnown RBP22.76■■□□□ 1.23
LMO4-202ENST00000370544 ATP8B2P98198 1209 aa22.75■■□□□ 1.23
LMO4-202ENST00000370544 NBPF6Q5VWK0 638 aa22.75■■□□□ 1.23
LMO4-202ENST00000370544 NBPF5PQ86XG9 351 aaPredicted RBP22.75■■□□□ 1.23
LMO4-202ENST00000370544 NBPF4Q96M43 638 aa22.75■■□□□ 1.23
LMO4-202ENST00000370544 SEPT7Q16181 437 aaKnown RBP22.75■■□□□ 1.23
LMO4-202ENST00000370544 ADAMTS12P58397 1594 aa22.75■■□□□ 1.23
LMO4-202ENST00000370544 CCDC191Q8NCU4 936 aa22.75■■□□□ 1.23
LMO4-202ENST00000370544 ABCC10Q5T3U5 1492 aa22.75■■□□□ 1.23
LMO4-202ENST00000370544 RAB11FIP4Q86YS3 637 aa22.75■■□□□ 1.23
LMO4-202ENST00000370544 CENPHQ9H3R5 247 aa22.75■■□□□ 1.23
LMO4-202ENST00000370544 EHMT1Q9H9B1 1298 aa22.75■■□□□ 1.23
LMO4-202ENST00000370544 FGFR1OPO95684 399 aaKnown RBP22.75■■□□□ 1.23
LMO4-202ENST00000370544 PTPN14Q15678 1187 aa22.75■■□□□ 1.23
LMO4-202ENST00000370544 CACNA2D4Q7Z3S7 1137 aa22.74■■□□□ 1.23
LMO4-202ENST00000370544 WDR62O43379 1518 aa22.74■■□□□ 1.23
LMO4-202ENST00000370544 NPATQ14207 1427 aa22.74■■□□□ 1.23
LMO4-202ENST00000370544 POTEJP0CG39 1038 aa22.74■■□□□ 1.23
LMO4-202ENST00000370544 MCM5P33992 734 aa22.74■■□□□ 1.23
LMO4-202ENST00000370544 FAM193AP78312 1265 aa22.74■■□□□ 1.23
LMO4-202ENST00000370544 SLC26A6Q9BXS9 759 aa22.74■■□□□ 1.23
LMO4-202ENST00000370544 BAG4O95429 457 aaKnown RBP22.73■■□□□ 1.23
LMO4-202ENST00000370544 ZFYP08048 801 aaPredicted RBP22.73■■□□□ 1.23
LMO4-202ENST00000370544 UBXN4Q92575 508 aa22.73■■□□□ 1.23
LMO4-202ENST00000370544 CRNKL1Q9BZJ0 848 aaKnown RBP22.73■■□□□ 1.23
LMO4-202ENST00000370544 ST5P78524 1137 aa22.73■■□□□ 1.23
LMO4-202ENST00000370544 PPP4R3AQ6IN85 833 aa22.73■■□□□ 1.23
LMO4-202ENST00000370544 STX1AQ16623 288 aa22.73■■□□□ 1.23
LMO4-202ENST00000370544 USP25Q9UHP3 1055 aa22.73■■□□□ 1.23
LMO4-202ENST00000370544 KIF20AO95235 890 aa22.72■■□□□ 1.23
LMO4-202ENST00000370544 ATP6V1AP38606 617 aa22.72■■□□□ 1.23
LMO4-202ENST00000370544 SSR1P43307 286 aaKnown RBP22.72■■□□□ 1.23
LMO4-202ENST00000370544 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
LMO4-202ENST00000370544 TMX3Q96JJ7 454 aa22.72■■□□□ 1.23
LMO4-202ENST00000370544 ATP2B3Q16720 1220 aa22.72■■□□□ 1.23
LMO4-202ENST00000370544 GSTO1P78417 241 aa22.72■■□□□ 1.23
LMO4-202ENST00000370544 SLC4A8Q2Y0W8 1093 aa22.72■■□□□ 1.23
LMO4-202ENST00000370544 LMBR1LQ6UX01 489 aa22.72■■□□□ 1.23
LMO4-202ENST00000370544 ANKRD18AQ8IVF6 992 aa22.72■■□□□ 1.23
LMO4-202ENST00000370544 ESYT1Q9BSJ8 1104 aa22.72■■□□□ 1.23
LMO4-202ENST00000370544 ZFYVE9O95405 1425 aa22.71■■□□□ 1.23
LMO4-202ENST00000370544 SHANK2Q9UPX8 1470 aa22.71■■□□□ 1.23
LMO4-202ENST00000370544 PPFIA3O75145 1194 aa22.71■■□□□ 1.23
LMO4-202ENST00000370544 BRF1Q92994 677 aa22.71■■□□□ 1.23
LMO4-202ENST00000370544 HLA-DOAP06340 250 aa22.71■■□□□ 1.23
LMO4-202ENST00000370544 TCP11L1Q9NUJ3 509 aa22.71■■□□□ 1.23
LMO4-202ENST00000370544 KIF5CO60282 957 aa22.71■■□□□ 1.23
LMO4-202ENST00000370544 TESK2Q96S53 571 aa22.71■■□□□ 1.23
LMO4-202ENST00000370544 VAT1LQ9HCJ6 419 aa22.71■■□□□ 1.23
LMO4-202ENST00000370544 CALML4Q96GE6 196 aa22.71■■□□□ 1.23
LMO4-202ENST00000370544 ACSBG1Q96GR2 724 aa22.7■■□□□ 1.22
LMO4-202ENST00000370544 BIN1O00499 593 aa22.7■■□□□ 1.22
LMO4-202ENST00000370544 IL15P40933 162 aaPredicted RBP22.7■■□□□ 1.22
LMO4-202ENST00000370544 CFAP43Q8NDM7 1665 aa22.7■■□□□ 1.22
LMO4-202ENST00000370544 NUP88Q99567 741 aaPredicted RBP22.7■■□□□ 1.22
LMO4-202ENST00000370544 KLF18A0A0U1RQI7 1052 aa22.7■■□□□ 1.22
LMO4-202ENST00000370544 UBE2HP62256 183 aa22.7■■□□□ 1.22
LMO4-202ENST00000370544 KRT23Q9C075 422 aa22.7■■□□□ 1.22
LMO4-202ENST00000370544 ZSCAN16Q9H4T2 348 aaPredicted RBP22.69■■□□□ 1.22
LMO4-202ENST00000370544 MAP3K5Q99683 1374 aa22.69■■□□□ 1.22
LMO4-202ENST00000370544 VPS36Q86VN1 386 aa22.69■■□□□ 1.22
LMO4-202ENST00000370544 SCLT1Q96NL6 688 aa22.69■■□□□ 1.22
LMO4-202ENST00000370544 RBM8AQ9Y5S9 174 aaKnown RBP22.69■■□□□ 1.22
LMO4-202ENST00000370544 PIK3C2GO75747 1445 aa22.69■■□□□ 1.22
LMO4-202ENST00000370544 CASQ1P31415 396 aa22.69■■□□□ 1.22
LMO4-202ENST00000370544 WTAPQ15007 396 aa22.69■■□□□ 1.22
LMO4-202ENST00000370544 ZNF622Q969S3 477 aaKnown RBP eCLIP22.69■■□□□ 1.22
LMO4-202ENST00000370544 A0A1W2PP64 1363 aa22.69■■□□□ 1.22
LMO4-202ENST00000370544 AMPD3Q01432 767 aa22.68■■□□□ 1.22
LMO4-202ENST00000370544 MCMDC2Q4G0Z9 681 aa22.68■■□□□ 1.22
LMO4-202ENST00000370544 CABP5Q9NP86 173 aa22.68■■□□□ 1.22
LMO4-202ENST00000370544 NECAB1Q8N987 351 aa22.68■■□□□ 1.22
LMO4-202ENST00000370544 CCDC102AQ96A19 550 aa22.68■■□□□ 1.22
LMO4-202ENST00000370544 ZSCAN22P10073 491 aaPredicted RBP22.68■■□□□ 1.22
LMO4-202ENST00000370544 TRIM21P19474 475 aaKnown RBP22.68■■□□□ 1.22
LMO4-202ENST00000370544 ENOX2Q16206 610 aaKnown RBP22.68■■□□□ 1.22
LMO4-202ENST00000370544 TAX1BP1Q86VP1 789 aa22.68■■□□□ 1.22
LMO4-202ENST00000370544 PYM1Q9BRP8 204 aaKnown RBP22.68■■□□□ 1.22
LMO4-202ENST00000370544 CYP7A1P22680 504 aa22.68■■□□□ 1.22
LMO4-202ENST00000370544 ANKRD62A6NC57 917 aa22.67■■□□□ 1.22
LMO4-202ENST00000370544 KIF18AQ8NI77 898 aa22.67■■□□□ 1.22
LMO4-202ENST00000370544 SETDB2Q96T68 719 aa22.67■■□□□ 1.22
LMO4-202ENST00000370544 FEZ1Q99689 392 aa22.67■■□□□ 1.22
LMO4-202ENST00000370544 YEATS4O95619 227 aa22.67■■□□□ 1.22
LMO4-202ENST00000370544 SLC4A4Q9Y6R1 1079 aa22.67■■□□□ 1.22
LMO4-202ENST00000370544 ANAPC15P60006 121 aa22.67■■□□□ 1.22
LMO4-202ENST00000370544 CPLX3Q8WVH0 158 aa22.67■■□□□ 1.22
LMO4-202ENST00000370544 PANK2Q9BZ23 570 aa22.67■■□□□ 1.22
LMO4-202ENST00000370544 IL2RBP14784 551 aa22.67■■□□□ 1.22
LMO4-202ENST00000370544 ZRSR2Q15696 482 aaKnown RBP22.67■■□□□ 1.22
LMO4-202ENST00000370544 RBM27Q9P2N5 1060 aaKnown RBP22.66■■□□□ 1.22
LMO4-202ENST00000370544 VAMP4O75379 141 aa22.66■■□□□ 1.22
LMO4-202ENST00000370544 TSPYL6Q8N831 410 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms