RNA–Protein interactions for RNA: ENST00000369049.8

ECM1-203, Transcript of extracellular matrix protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECM1, Length 1,925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-203ENST00000369049 UTP14AQ9BVJ6 771 aaKnown RBP16.11■□□□□ 0.17
ECM1-203ENST00000369049 TIAM2Q8IVF5 1701 aa16.11■□□□□ 0.17
ECM1-203ENST00000369049 HOXA10P31260 410 aaPredicted RBP16.1■□□□□ 0.17
ECM1-203ENST00000369049 PRELPP51888 382 aa16.1■□□□□ 0.17
ECM1-203ENST00000369049 GNAI1P63096 354 aa16.1■□□□□ 0.17
ECM1-203ENST00000369049 FKBP4Q02790 459 aaKnown RBP eCLIP16.1■□□□□ 0.17
ECM1-203ENST00000369049 HDGFL1Q5TGJ6 251 aa16.1■□□□□ 0.17
ECM1-203ENST00000369049 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
ECM1-203ENST00000369049 SMC1BQ8NDV3 1235 aa16.1■□□□□ 0.17
ECM1-203ENST00000369049 TMX4Q9H1E5 349 aaPredicted RBP16.1■□□□□ 0.17
ECM1-203ENST00000369049 IFT57Q9NWB7 429 aa16.1■□□□□ 0.17
ECM1-203ENST00000369049 DBF4Q9UBU7 674 aaPredicted RBP16.1■□□□□ 0.17
ECM1-203ENST00000369049 UBN2Q6ZU65 1347 aa16.1■□□□□ 0.17
ECM1-203ENST00000369049 COPS6Q7L5N1 327 aa16.09■□□□□ 0.17
ECM1-203ENST00000369049 NUTM1Q86Y26 1132 aa16.09■□□□□ 0.17
ECM1-203ENST00000369049 DICER1Q9UPY3 1922 aaKnown RBP16.09■□□□□ 0.17
ECM1-203ENST00000369049 APAF1O14727 1248 aa16.09■□□□□ 0.17
ECM1-203ENST00000369049 NTSR2O95665 410 aa16.09■□□□□ 0.17
ECM1-203ENST00000369049 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
ECM1-203ENST00000369049 NLRP3Q96P20 1036 aa16.09■□□□□ 0.17
ECM1-203ENST00000369049 CRAMP1Q96RY5 1269 aa16.09■□□□□ 0.17
ECM1-203ENST00000369049 HYPKQ9NX55 129 aa16.09■□□□□ 0.17
ECM1-203ENST00000369049 ABCC12Q96J65 1359 aa16.09■□□□□ 0.17
ECM1-203ENST00000369049 SLC10A5Q5PT55 438 aa16.08■□□□□ 0.16
ECM1-203ENST00000369049 DAXXQ9UER7 740 aaPredicted RBP16.08■□□□□ 0.16
ECM1-203ENST00000369049 CCDC88AQ3V6T2 1871 aa16.08■□□□□ 0.16
ECM1-203ENST00000369049 AIMP1Q12904 312 aaKnown RBP16.07■□□□□ 0.16
ECM1-203ENST00000369049 PROSER3Q2NL68 480 aa16.07■□□□□ 0.16
ECM1-203ENST00000369049 CACNA1SQ13698 1873 aa16.07■□□□□ 0.16
ECM1-203ENST00000369049 ZNF853P0CG23 659 aa16.07■□□□□ 0.16
ECM1-203ENST00000369049 TCIRG1Q13488 830 aa16.07■□□□□ 0.16
ECM1-203ENST00000369049 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
ECM1-203ENST00000369049 NECTIN2Q92692 538 aa16.07■□□□□ 0.16
ECM1-203ENST00000369049 PSMD1Q99460 953 aa16.07■□□□□ 0.16
ECM1-203ENST00000369049 WDR90Q96KV7 1748 aa16.06■□□□□ 0.16
ECM1-203ENST00000369049 PLBD2Q8NHP8 589 aa16.06■□□□□ 0.16
ECM1-203ENST00000369049 MBIPQ9NS73 344 aa16.06■□□□□ 0.16
ECM1-203ENST00000369049 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
ECM1-203ENST00000369049 ANP32CO43423 234 aa16.06■□□□□ 0.16
ECM1-203ENST00000369049 ANXA1P04083 346 aa16.06■□□□□ 0.16
ECM1-203ENST00000369049 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
ECM1-203ENST00000369049 IQCA1LA6NCM1 817 aa16.05■□□□□ 0.16
ECM1-203ENST00000369049 ANKRD13DQ6ZTN6 518 aa16.05■□□□□ 0.16
ECM1-203ENST00000369049 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
ECM1-203ENST00000369049 ANKRD36CQ5JPF3 1778 aa16.04■□□□□ 0.16
ECM1-203ENST00000369049 KRT24Q2M2I5 525 aa16.04■□□□□ 0.16
ECM1-203ENST00000369049 SYNE4Q8N205 404 aa16.04■□□□□ 0.16
ECM1-203ENST00000369049 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
ECM1-203ENST00000369049 PPEF1O14829 653 aaPredicted RBP16.04■□□□□ 0.16
ECM1-203ENST00000369049 IARSP41252 1262 aaKnown RBP16.04■□□□□ 0.16
ECM1-203ENST00000369049 CCDC27Q2M243 656 aa16.04■□□□□ 0.16
ECM1-203ENST00000369049 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
ECM1-203ENST00000369049 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
ECM1-203ENST00000369049 JDP2Q8WYK2 163 aa16.03■□□□□ 0.16
ECM1-203ENST00000369049 VPS33BQ9H267 617 aa16.03■□□□□ 0.16
ECM1-203ENST00000369049 BBOX1O75936 387 aa16.02■□□□□ 0.16
ECM1-203ENST00000369049 GOLGA2Q08379 1002 aa16.02■□□□□ 0.16
ECM1-203ENST00000369049 ZNF277Q9NRM2 450 aaPredicted RBP16.02■□□□□ 0.16
ECM1-203ENST00000369049 TMC4Q7Z404 712 aa16.02■□□□□ 0.15
ECM1-203ENST00000369049 SUPT20HQ8NEM7 779 aa16.02■□□□□ 0.15
ECM1-203ENST00000369049 L3MBTL3Q96JM7 780 aaPredicted RBP16.02■□□□□ 0.15
ECM1-203ENST00000369049 TRIM28Q13263 835 aaKnown RBP16.01■□□□□ 0.15
ECM1-203ENST00000369049 CCDC30Q5VVM6 783 aa16.01■□□□□ 0.15
ECM1-203ENST00000369049 DDX46Q7L014 1031 aaKnown RBP16.01■□□□□ 0.15
ECM1-203ENST00000369049 DDX58O95786 925 aaKnown RBP16■□□□□ 0.15
ECM1-203ENST00000369049 ISCA1Q9BUE6 129 aa16■□□□□ 0.15
ECM1-203ENST00000369049 ATP6V0A2Q9Y487 856 aa16■□□□□ 0.15
ECM1-203ENST00000369049 RBM19Q9Y4C8 960 aaKnown RBP16■□□□□ 0.15
ECM1-203ENST00000369049 FZD9O00144 591 aa16■□□□□ 0.15
ECM1-203ENST00000369049 DDNO94850 711 aaPredicted RBP16■□□□□ 0.15
ECM1-203ENST00000369049 RIC3Q7Z5B4 369 aa16■□□□□ 0.15
ECM1-203ENST00000369049 MRS2Q9HD23 443 aa16■□□□□ 0.15
ECM1-203ENST00000369049 IL16Q14005 1332 aa15.99■□□□□ 0.15
ECM1-203ENST00000369049 POTECB2RU33 542 aa15.99■□□□□ 0.15
ECM1-203ENST00000369049 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
ECM1-203ENST00000369049 SNED1Q8TER0 1413 aa15.99■□□□□ 0.15
ECM1-203ENST00000369049 OLFM4Q6UX06 510 aa15.98■□□□□ 0.15
ECM1-203ENST00000369049 SP8Q8IXZ3 490 aa15.98■□□□□ 0.15
ECM1-203ENST00000369049 GPC2Q8N158 579 aa15.98■□□□□ 0.15
ECM1-203ENST00000369049 ABCC4O15439 1325 aa15.98■□□□□ 0.15
ECM1-203ENST00000369049 SCN4AP35499 1836 aa15.98■□□□□ 0.15
ECM1-203ENST00000369049 CHADLQ6NUI6 762 aa15.98■□□□□ 0.15
ECM1-203ENST00000369049 C3orf67Q6ZVT6 689 aa15.98■□□□□ 0.15
ECM1-203ENST00000369049 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
ECM1-203ENST00000369049 HCLS1P14317 486 aaPredicted RBP15.97■□□□□ 0.15
ECM1-203ENST00000369049 GRAPQ13588 217 aa15.97■□□□□ 0.15
ECM1-203ENST00000369049 GRAPLQ8TC17 118 aaPredicted RBP15.97■□□□□ 0.15
ECM1-203ENST00000369049 HACL1Q9UJ83 578 aa15.97■□□□□ 0.15
ECM1-203ENST00000369049 PNMA8AQ86V59 439 aaPredicted RBP15.96■□□□□ 0.15
ECM1-203ENST00000369049 LDHDQ86WU2 507 aa15.96■□□□□ 0.15
ECM1-203ENST00000369049 WWC1Q8IX03 1113 aa15.96■□□□□ 0.15
ECM1-203ENST00000369049 NIM1KQ8IY84 436 aa15.96■□□□□ 0.15
ECM1-203ENST00000369049 DNAJC5GQ8N7S2 189 aa15.96■□□□□ 0.15
ECM1-203ENST00000369049 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
ECM1-203ENST00000369049 ELL2O00472 640 aaPredicted RBP15.96■□□□□ 0.14
ECM1-203ENST00000369049 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.14
ECM1-203ENST00000369049 C8orf58Q8NAV2 365 aa15.96■□□□□ 0.14
ECM1-203ENST00000369049 RTFDC1Q9BY42 306 aaPredicted RBP15.96■□□□□ 0.14
ECM1-203ENST00000369049 ZNF541Q9H0D2 1346 aa15.95■□□□□ 0.14
ECM1-203ENST00000369049 DPP8Q6V1X1 898 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms