RNA–Protein interactions for RNA: ENST00000368936.5

PRUNE1-204, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-204ENST00000368936 G3BP1Q13283 466 aaKnown RBP eCLIP11.54□□□□□ -0.56
PRUNE1-204ENST00000368936 LRSAM1Q6UWE0 723 aa11.54□□□□□ -0.56
PRUNE1-204ENST00000368936 INTS4Q96HW7 963 aaKnown RBP11.54□□□□□ -0.56
PRUNE1-204ENST00000368936 DDX21Q9NR30 783 aaKnown RBP eCLIP11.54□□□□□ -0.56
PRUNE1-204ENST00000368936 SLFNL1Q499Z3 407 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 UBE3BQ7Z3V4 1068 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 ZNF589Q86UQ0 364 aaPredicted RBP11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 FERMT3Q86UX7 667 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 HYPKQ9NX55 129 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 CHMP3Q9Y3E7 222 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 RBM8AQ9Y5S9 174 aaKnown RBP11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 TTC41PQ6P2S7 1318 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 EP400Q96L91 3159 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 ALDH1L1O75891 902 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 ST3GAL1Q11201 340 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 STK3Q13188 491 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 MTX1Q13505 466 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 FAM173BQ6P4H8 233 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 SMC3Q9UQE7 1217 aa11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 AFDNP55196 1824 aaKnown RBP11.53□□□□□ -0.56
PRUNE1-204ENST00000368936 DDX58O95786 925 aaKnown RBP11.52□□□□□ -0.56
PRUNE1-204ENST00000368936 PHKG2P15735 406 aa11.52□□□□□ -0.56
PRUNE1-204ENST00000368936 GJB2P29033 226 aa11.52□□□□□ -0.56
PRUNE1-204ENST00000368936 GPATCH3Q96I76 525 aa11.52□□□□□ -0.56
PRUNE1-204ENST00000368936 PPP1R9BQ96SB3 815 aa11.52□□□□□ -0.56
PRUNE1-204ENST00000368936 PDRG1Q9NUG6 133 aa11.52□□□□□ -0.56
PRUNE1-204ENST00000368936 LIMCH1Q9UPQ0 1083 aa11.52□□□□□ -0.56
PRUNE1-204ENST00000368936 NCAPD2Q15021 1401 aa11.52□□□□□ -0.56
PRUNE1-204ENST00000368936 CCDC171Q6TFL3 1326 aa11.52□□□□□ -0.57
PRUNE1-204ENST00000368936 WDR33Q9C0J8 1336 aaKnown RBP11.52□□□□□ -0.57
PRUNE1-204ENST00000368936 HEG1Q9ULI3 1381 aa11.52□□□□□ -0.57
PRUNE1-204ENST00000368936 STX6O43752 255 aa11.52□□□□□ -0.57
PRUNE1-204ENST00000368936 CCDC129Q6ZRS4 1044 aa11.52□□□□□ -0.57
PRUNE1-204ENST00000368936 DNAJC2Q99543 621 aaKnown RBP11.52□□□□□ -0.57
PRUNE1-204ENST00000368936 SCN11AQ9UI33 1791 aa11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 PPFIA3O75145 1194 aa11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 MSNP26038 577 aaKnown RBP11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 ME3Q16798 604 aa11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 SEC62Q99442 399 aaKnown RBP11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 SOS2Q07890 1332 aaPredicted RBP11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 CYP27B1O15528 508 aa11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 TATP17735 454 aaPredicted RBP11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 DNM1Q05193 864 aaKnown RBP11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 NEXNQ0ZGT2 675 aa11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 TTC5Q8N0Z6 440 aa11.51□□□□□ -0.57
PRUNE1-204ENST00000368936 MBD3O95983 291 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 GCKRQ14397 625 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 CREB3L3Q68CJ9 461 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 EVI5LQ96CN4 794 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 TPCN1Q9ULQ1 816 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 ZSCAN22P10073 491 aaPredicted RBP11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 RUFY2Q8WXA3 655 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 USP42Q9H9J4 1324 aaKnown RBP11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 KAT6BQ8WYB5 2073 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 TFCP2Q12800 502 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 ZSCAN30Q86W11 494 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 ERC1Q8IUD2 1116 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 DBNLQ9UJU6 430 aaKnown RBP11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 CYP46A1Q9Y6A2 500 aa11.5□□□□□ -0.57
PRUNE1-204ENST00000368936 CAMTA1Q9Y6Y1 1673 aa11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 COL18A1P39060 1754 aa11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 F13A1P00488 732 aa11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 FOSBP53539 338 aa11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 ANKRD13DQ6ZTN6 518 aa11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 DDX46Q7L014 1031 aaKnown RBP11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 LRRC2Q9BYS8 371 aa11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 SLC27A2O14975 620 aa11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 HCLS1P14317 486 aaPredicted RBP11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 PIP4K2BP78356 416 aa11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 NECTIN1Q15223 517 aa11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 LARP1Q6PKG0 1096 aaKnown RBP11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 TSPY26PQ9H489 355 aa11.49□□□□□ -0.57
PRUNE1-204ENST00000368936 A0A087WZG4 1122 aa11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 COL15A1P39059 1388 aa11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 CDC37L1Q7L3B6 337 aa11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 CCDC85AQ96PX6 553 aaPredicted RBP11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 DBNDD2Q9BQY9 259 aa11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 GIMAP6Q6P9H5 292 aa11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 IFNL2Q8IZJ0 200 aa11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 METTL22Q9BUU2 404 aaPredicted RBP11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 PRDM11Q9NQV5 511 aa11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 STRN4Q9NRL3 753 aa11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 USP25Q9UHP3 1055 aa11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.48□□□□□ -0.57
PRUNE1-204ENST00000368936 ZNF830Q96NB3 372 aaPredicted RBP11.47□□□□□ -0.57
PRUNE1-204ENST00000368936 ARFGEF2Q9Y6D5 1785 aa11.47□□□□□ -0.57
PRUNE1-204ENST00000368936 CABP4P57796 275 aa11.47□□□□□ -0.57
PRUNE1-204ENST00000368936 PTPN12Q05209 780 aaKnown RBP11.47□□□□□ -0.57
PRUNE1-204ENST00000368936 IL17RAQ96F46 866 aa11.47□□□□□ -0.57
PRUNE1-204ENST00000368936 CHMP4AQ9BY43 222 aa11.47□□□□□ -0.57
PRUNE1-204ENST00000368936 ZBTB3Q9H5J0 574 aa11.47□□□□□ -0.57
PRUNE1-204ENST00000368936 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
PRUNE1-204ENST00000368936 MTMR6Q9Y217 621 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms