RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 RGPD4Q7Z3J3 1758 aa32.46■■■□□ 2.79
EFNA1-202ENST00000368407 RIC3Q7Z5B4 369 aa32.46■■■□□ 2.79
EFNA1-202ENST00000368407 DNAAF4Q8WXU2 420 aa32.46■■■□□ 2.79
EFNA1-202ENST00000368407 AK7Q96M32 723 aa32.45■■■□□ 2.79
EFNA1-202ENST00000368407 ZBTB3Q9H5J0 574 aa32.45■■■□□ 2.79
EFNA1-202ENST00000368407 RPS6KA4O75676 772 aa32.45■■■□□ 2.78
EFNA1-202ENST00000368407 TBC1D2BQ9UPU7 963 aa32.45■■■□□ 2.78
EFNA1-202ENST00000368407 PLBD2Q8NHP8 589 aa32.44■■■□□ 2.78
EFNA1-202ENST00000368407 COL15A1P39059 1388 aa32.44■■■□□ 2.78
EFNA1-202ENST00000368407 DZIP3Q86Y13 1208 aaKnown RBP32.43■■■□□ 2.78
EFNA1-202ENST00000368407 CCDC125Q86Z20 511 aa32.43■■■□□ 2.78
EFNA1-202ENST00000368407 RTCBQ9Y3I0 505 aaKnown RBP32.42■■■□□ 2.78
EFNA1-202ENST00000368407 CDC45O75419 566 aa32.41■■■□□ 2.78
EFNA1-202ENST00000368407 KIF6Q6ZMV9 814 aa32.41■■■□□ 2.78
EFNA1-202ENST00000368407 TBC1D9Q6ZT07 1266 aa32.41■■■□□ 2.78
EFNA1-202ENST00000368407 ZNF827Q17R98 1081 aa32.41■■■□□ 2.78
EFNA1-202ENST00000368407 ANKRD45Q5TZF3 282 aa32.41■■■□□ 2.78
EFNA1-202ENST00000368407 INTS3Q68E01 1043 aaKnown RBP32.41■■■□□ 2.78
EFNA1-202ENST00000368407 ILDR2Q71H61 639 aa32.41■■■□□ 2.78
EFNA1-202ENST00000368407 ESPNB1AK53 854 aa32.4■■■□□ 2.78
EFNA1-202ENST00000368407 MAP3K15Q6ZN16 1313 aa32.4■■■□□ 2.78
EFNA1-202ENST00000368407 PHF14O94880 888 aa32.39■■■□□ 2.78
EFNA1-202ENST00000368407 GOLGA6L22H0YM25 854 aa32.39■■■□□ 2.78
EFNA1-202ENST00000368407 BEND3Q5T5X7 828 aa32.39■■■□□ 2.78
EFNA1-202ENST00000368407 UPF1Q92900 1129 aaKnown RBP eCLIP32.39■■■□□ 2.787e-36■■■■■ 108.3
EFNA1-202ENST00000368407 METTL22Q9BUU2 404 aaPredicted RBP32.38■■■□□ 2.77
EFNA1-202ENST00000368407 HLFQ16534 295 aa32.38■■■□□ 2.77
EFNA1-202ENST00000368407 AKT1S1Q96B36 256 aa32.38■■■□□ 2.77
EFNA1-202ENST00000368407 MYD88Q99836 296 aa32.38■■■□□ 2.77
EFNA1-202ENST00000368407 PXDNLA1KZ92 1463 aa32.37■■■□□ 2.77
EFNA1-202ENST00000368407 CCT4P50991 539 aaKnown RBP32.37■■■□□ 2.77
EFNA1-202ENST00000368407 RABEP1Q15276 862 aa32.36■■■□□ 2.77
EFNA1-202ENST00000368407 ARHGEF1Q92888 912 aaKnown RBP32.36■■■□□ 2.77
EFNA1-202ENST00000368407 ARFGEF2Q9Y6D5 1785 aa32.35■■■□□ 2.77
EFNA1-202ENST00000368407 CAMTA2O94983 1202 aa32.35■■■□□ 2.77
EFNA1-202ENST00000368407 CWF19L2Q2TBE0 894 aaKnown RBP32.35■■■□□ 2.77
EFNA1-202ENST00000368407 SRCIN1Q9C0H9 1055 aa32.35■■■□□ 2.77
EFNA1-202ENST00000368407 NUP188Q5SRE5 1749 aa32.34■■■□□ 2.77
EFNA1-202ENST00000368407 A0A087WZG4 1122 aa32.34■■■□□ 2.77
EFNA1-202ENST00000368407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.34■■■□□ 2.77
EFNA1-202ENST00000368407 IGKV5-2P06315 115 aa32.34■■■□□ 2.77
EFNA1-202ENST00000368407 HMGB2P26583 209 aaKnown RBP32.34■■■□□ 2.77
EFNA1-202ENST00000368407 ATP10DQ9P241 1426 aa32.34■■■□□ 2.77
EFNA1-202ENST00000368407 SIRT2Q8IXJ6 389 aa32.34■■■□□ 2.77
EFNA1-202ENST00000368407 ERVV-1B6SEH8 477 aa32.33■■■□□ 2.77
EFNA1-202ENST00000368407 ATP5J2-PTCD1G3V325 749 aa32.33■■■□□ 2.77
EFNA1-202ENST00000368407 KLHL40Q2TBA0 621 aa32.33■■■□□ 2.77
EFNA1-202ENST00000368407 TRAPPC3LQ5T215 181 aa32.33■■■□□ 2.77
EFNA1-202ENST00000368407 GIGYF2Q6Y7W6 1299 aaKnown RBP32.33■■■□□ 2.77
EFNA1-202ENST00000368407 UBR3Q6ZT12 1888 aa32.32■■■□□ 2.77
EFNA1-202ENST00000368407 HSP90AA1P07900 732 aaKnown RBP32.32■■■□□ 2.76
EFNA1-202ENST00000368407 CCDC173Q0VFZ6 552 aa32.32■■■□□ 2.76
EFNA1-202ENST00000368407 LINS1Q8NG48 757 aa32.32■■■□□ 2.76
EFNA1-202ENST00000368407 TFCP2L1Q9NZI6 479 aa32.32■■■□□ 2.76
EFNA1-202ENST00000368407 NEXNQ0ZGT2 675 aa32.32■■■□□ 2.76
EFNA1-202ENST00000368407 TRIM44Q96DX7 344 aaPredicted RBP32.32■■■□□ 2.76
EFNA1-202ENST00000368407 PPP1R9BQ96SB3 815 aa32.32■■■□□ 2.76
EFNA1-202ENST00000368407 SRP68Q9UHB9 627 aaKnown RBP32.32■■■□□ 2.76
EFNA1-202ENST00000368407 SSFA2P28290 1259 aa32.31■■■□□ 2.76
EFNA1-202ENST00000368407 TCIRG1Q13488 830 aa32.3■■■□□ 2.76
EFNA1-202ENST00000368407 NARFQ9UHQ1 456 aa32.3■■■□□ 2.76
EFNA1-202ENST00000368407 NEURL1BA8MQ27 555 aa32.29■■■□□ 2.76
EFNA1-202ENST00000368407 ADRA2BP18089 450 aa32.29■■■□□ 2.76
EFNA1-202ENST00000368407 NAP1L5Q96NT1 182 aaPredicted RBP32.29■■■□□ 2.76
EFNA1-202ENST00000368407 DCTPP1Q9H773 170 aa32.29■■■□□ 2.76
EFNA1-202ENST00000368407 RFC4P35249 363 aa32.28■■■□□ 2.76
EFNA1-202ENST00000368407 NUCB2P80303 420 aa32.28■■■□□ 2.76
EFNA1-202ENST00000368407 USPL1Q5W0Q7 1092 aa32.28■■■□□ 2.76
EFNA1-202ENST00000368407 GAS2L3Q86XJ1 694 aa32.28■■■□□ 2.76
EFNA1-202ENST00000368407 MEIS3Q99687 375 aa32.28■■■□□ 2.76
EFNA1-202ENST00000368407 CD2BP2O95400 341 aaKnown RBP32.28■■■□□ 2.76
EFNA1-202ENST00000368407 ALDH1L1O75891 902 aa32.27■■■□□ 2.76
EFNA1-202ENST00000368407 BCL2L12Q9HB09 334 aa32.27■■■□□ 2.76
EFNA1-202ENST00000368407 ISCA1Q9BUE6 129 aa32.26■■■□□ 2.76
EFNA1-202ENST00000368407 N4BP2Q86UW6 1770 aaPredicted RBP32.26■■■□□ 2.76
EFNA1-202ENST00000368407 USP42Q9H9J4 1324 aaKnown RBP32.26■■■□□ 2.75
EFNA1-202ENST00000368407 ZPR1O75312 459 aa32.26■■■□□ 2.75
EFNA1-202ENST00000368407 GPTP24298 496 aa32.26■■■□□ 2.75
EFNA1-202ENST00000368407 SLC15A2Q16348 729 aa32.26■■■□□ 2.75
EFNA1-202ENST00000368407 USP44Q9H0E7 712 aa32.26■■■□□ 2.75
EFNA1-202ENST00000368407 RRP9O43818 475 aaKnown RBP32.25■■■□□ 2.75
EFNA1-202ENST00000368407 C4AP0C0L4 1744 aa32.25■■■□□ 2.75
EFNA1-202ENST00000368407 TTC22Q5TAA0 569 aa32.24■■■□□ 2.75
EFNA1-202ENST00000368407 PLEKHM2Q8IWE5 1019 aa32.24■■■□□ 2.75
EFNA1-202ENST00000368407 STK32BQ9NY57 414 aa32.24■■■□□ 2.75
EFNA1-202ENST00000368407 ZNF445P59923 1031 aa32.24■■■□□ 2.75
EFNA1-202ENST00000368407 HSP90AB3PQ58FF7 597 aa32.24■■■□□ 2.75
EFNA1-202ENST00000368407 CWC22Q9HCG8 908 aaKnown RBP32.24■■■□□ 2.75
EFNA1-202ENST00000368407 BAG4O95429 457 aaKnown RBP32.23■■■□□ 2.75
EFNA1-202ENST00000368407 GCKRQ14397 625 aa32.23■■■□□ 2.75
EFNA1-202ENST00000368407 COL23A1Q86Y22 540 aaPredicted RBP32.23■■■□□ 2.75
EFNA1-202ENST00000368407 BCORQ6W2J9 1755 aa32.23■■■□□ 2.75
EFNA1-202ENST00000368407 PNPLA7Q6ZV29 1317 aa32.22■■■□□ 2.75
EFNA1-202ENST00000368407 CYP2E1P05181 493 aaPredicted RBP32.22■■■□□ 2.75
EFNA1-202ENST00000368407 NUP98P52948 1817 aa32.22■■■□□ 2.75
EFNA1-202ENST00000368407 SCN7AQ01118 1682 aa32.22■■■□□ 2.75
EFNA1-202ENST00000368407 GSPT1P15170 499 aaKnown RBP32.22■■■□□ 2.75
EFNA1-202ENST00000368407 CLEC4GQ6UXB4 293 aa32.22■■■□□ 2.75
EFNA1-202ENST00000368407 ZNF34Q8IZ26 560 aa32.22■■■□□ 2.75
EFNA1-202ENST00000368407 ZNF652Q9Y2D9 606 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms