RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
USF1-202ENST00000368020 NUCB2P80303 420 aa17.04■□□□□ 0.32
USF1-202ENST00000368020 RUFY2Q8WXA3 655 aa17.04■□□□□ 0.32
USF1-202ENST00000368020 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
USF1-202ENST00000368020 ATG3Q9NT62 314 aa17.04■□□□□ 0.32
USF1-202ENST00000368020 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
USF1-202ENST00000368020 G3BP1Q13283 466 aaKnown RBP eCLIP17.03■□□□□ 0.32
USF1-202ENST00000368020 GCKRQ14397 625 aa17.03■□□□□ 0.32
USF1-202ENST00000368020 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
USF1-202ENST00000368020 COPS6Q7L5N1 327 aa17.03■□□□□ 0.32
USF1-202ENST00000368020 NUTM1Q86Y26 1132 aa17.03■□□□□ 0.32
USF1-202ENST00000368020 ACSBG1Q96GR2 724 aa17.03■□□□□ 0.32
USF1-202ENST00000368020 ASAP1Q9ULH1 1129 aa17.03■□□□□ 0.32
USF1-202ENST00000368020 NHSQ6T4R5 1651 aa17.02■□□□□ 0.32
USF1-202ENST00000368020 GOLGA6L22H0YM25 854 aa17.02■□□□□ 0.32
USF1-202ENST00000368020 IGKV5-2P06315 115 aa17.02■□□□□ 0.32
USF1-202ENST00000368020 MYL6BP14649 208 aa17.02■□□□□ 0.32
USF1-202ENST00000368020 SKOR2Q2VWA4 1001 aaPredicted RBP17.02■□□□□ 0.32
USF1-202ENST00000368020 CLEC17AQ6ZS10 378 aa17.02■□□□□ 0.32
USF1-202ENST00000368020 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.32
USF1-202ENST00000368020 SMARCC1Q92922 1105 aaPredicted RBP17.02■□□□□ 0.32
USF1-202ENST00000368020 ANO2Q9NQ90 1003 aa17.02■□□□□ 0.32
USF1-202ENST00000368020 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.32
USF1-202ENST00000368020 KCPQ6ZWJ8 1503 aa17.02■□□□□ 0.31
USF1-202ENST00000368020 HIP1O00291 1037 aa17.01■□□□□ 0.31
USF1-202ENST00000368020 KCNQ2O43526 872 aa17.01■□□□□ 0.31
USF1-202ENST00000368020 LRP10Q7Z4F1 713 aa17.01■□□□□ 0.31
USF1-202ENST00000368020 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
USF1-202ENST00000368020 SUCLG2Q96I99 432 aa17.01■□□□□ 0.31
USF1-202ENST00000368020 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
USF1-202ENST00000368020 FAM182BQ5T319 152 aa17.01■□□□□ 0.31
USF1-202ENST00000368020 BCL11BQ9C0K0 894 aaPredicted RBP17.01■□□□□ 0.31
USF1-202ENST00000368020 NUP188Q5SRE5 1749 aa17■□□□□ 0.31
USF1-202ENST00000368020 TNPO1Q92973 898 aaKnown RBP17■□□□□ 0.31
USF1-202ENST00000368020 MYD88Q99836 296 aa17■□□□□ 0.31
USF1-202ENST00000368020 TEX13AQ9BXU3 409 aaPredicted RBP17■□□□□ 0.31
USF1-202ENST00000368020 USP16Q9Y5T5 823 aa17■□□□□ 0.31
USF1-202ENST00000368020 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
USF1-202ENST00000368020 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
USF1-202ENST00000368020 SGSM2O43147 1006 aa16.99■□□□□ 0.31
USF1-202ENST00000368020 EVI5LQ96CN4 794 aa16.99■□□□□ 0.31
USF1-202ENST00000368020 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
USF1-202ENST00000368020 RAD50Q92878 1312 aa16.98■□□□□ 0.31
USF1-202ENST00000368020 PTCD1O75127 700 aaKnown RBP16.98■□□□□ 0.31
USF1-202ENST00000368020 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
USF1-202ENST00000368020 DIAPH3Q9NSV4 1193 aa16.98■□□□□ 0.31
USF1-202ENST00000368020 BTAF1O14981 1849 aa16.97■□□□□ 0.31
USF1-202ENST00000368020 TRAK2O60296 914 aa16.97■□□□□ 0.31
USF1-202ENST00000368020 HSPA4P34932 840 aa16.97■□□□□ 0.31
USF1-202ENST00000368020 NEK4P51957 841 aa16.97■□□□□ 0.31
USF1-202ENST00000368020 AACSQ86V21 672 aa16.97■□□□□ 0.31
USF1-202ENST00000368020 COPRSQ9NQ92 184 aa16.97■□□□□ 0.31
USF1-202ENST00000368020 RABL6Q3YEC7 729 aaPredicted RBP16.96■□□□□ 0.31
USF1-202ENST00000368020 ZNF831Q5JPB2 1677 aa16.96■□□□□ 0.31
USF1-202ENST00000368020 PALLDQ8WX93 1383 aa16.96■□□□□ 0.31
USF1-202ENST00000368020 INTS4Q96HW7 963 aaKnown RBP16.96■□□□□ 0.3
USF1-202ENST00000368020 CICQ96RK0 1608 aaPredicted RBP16.95■□□□□ 0.3
USF1-202ENST00000368020 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
USF1-202ENST00000368020 PA2G4Q9UQ80 394 aaKnown RBP16.95■□□□□ 0.3
USF1-202ENST00000368020 LOC102724428A0A0B4J2F2 783 aa16.94■□□□□ 0.3
USF1-202ENST00000368020 SIK1P57059 783 aa16.94■□□□□ 0.3
USF1-202ENST00000368020 SOCS7O14512 581 aa16.93■□□□□ 0.3
USF1-202ENST00000368020 SASH1O94885 1247 aa16.93■□□□□ 0.3
USF1-202ENST00000368020 STARD3NLO95772 234 aa16.93■□□□□ 0.3
USF1-202ENST00000368020 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
USF1-202ENST00000368020 RFX7Q2KHR2 1363 aa16.93■□□□□ 0.3
USF1-202ENST00000368020 A0A087WZG4 1122 aa16.93■□□□□ 0.3
USF1-202ENST00000368020 CUL4AQ13619 759 aa16.93■□□□□ 0.3
USF1-202ENST00000368020 TICAM2Q86XR7 235 aa16.93■□□□□ 0.3
USF1-202ENST00000368020 EP400Q96L91 3159 aa16.92■□□□□ 0.3
USF1-202ENST00000368020 TRIM37O94972 964 aa16.92■□□□□ 0.3
USF1-202ENST00000368020 CYP2E1P05181 493 aaPredicted RBP16.92■□□□□ 0.3
USF1-202ENST00000368020 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
USF1-202ENST00000368020 UBE3BQ7Z3V4 1068 aa16.92■□□□□ 0.3
USF1-202ENST00000368020 LSG1Q9H089 658 aaKnown RBP16.92■□□□□ 0.3
USF1-202ENST00000368020 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
USF1-202ENST00000368020 CWC25Q9NXE8 425 aaPredicted RBP16.92■□□□□ 0.3
USF1-202ENST00000368020 TJP1Q07157 1748 aa16.91■□□□□ 0.3
USF1-202ENST00000368020 DNAJC10Q8IXB1 793 aa16.91■□□□□ 0.3
USF1-202ENST00000368020 CCDC191Q8NCU4 936 aa16.91■□□□□ 0.3
USF1-202ENST00000368020 TMX3Q96JJ7 454 aa16.91■□□□□ 0.3
USF1-202ENST00000368020 LY75O60449 1722 aa16.91■□□□□ 0.3
USF1-202ENST00000368020 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
USF1-202ENST00000368020 CWC27Q6UX04 472 aaKnown RBP16.9■□□□□ 0.3
USF1-202ENST00000368020 EAF2Q96CJ1 260 aaPredicted RBP16.9■□□□□ 0.3
USF1-202ENST00000368020 H7C1W4 665 aa16.9■□□□□ 0.3
USF1-202ENST00000368020 MAP4K4O95819 1239 aaPredicted RBP16.9■□□□□ 0.3
USF1-202ENST00000368020 CYP19A1P11511 503 aaPredicted RBP16.9■□□□□ 0.3
USF1-202ENST00000368020 SNRKQ9NRH2 765 aa16.9■□□□□ 0.3
USF1-202ENST00000368020 PALD1Q9ULE6 856 aa16.9■□□□□ 0.3
USF1-202ENST00000368020 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
USF1-202ENST00000368020 NBPF26B4DH59 902 aa16.89■□□□□ 0.29
USF1-202ENST00000368020 PLSCR1O15162 318 aa16.89■□□□□ 0.29
USF1-202ENST00000368020 SSFA2P28290 1259 aa16.89■□□□□ 0.29
USF1-202ENST00000368020 RFX5P48382 616 aaPredicted RBP16.89■□□□□ 0.29
USF1-202ENST00000368020 CASP7P55210 303 aa16.89■□□□□ 0.29
USF1-202ENST00000368020 NBPF14Q5TI25 921 aa16.89■□□□□ 0.29
USF1-202ENST00000368020 NBPF10Q6P3W6 841 aaKnown RBP16.89■□□□□ 0.29
USF1-202ENST00000368020 NBPF15Q8N660 670 aa16.89■□□□□ 0.29
USF1-202ENST00000368020 BAG4O95429 457 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms