RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 SHTN1A0MZ66 631 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 CHL1O00533 1208 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 RTN3O95197 1032 aaPredicted RBP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 GJA8P48165 433 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 IQCB1Q15051 598 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 SYNE3Q6ZMZ3 975 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 PPM1EQ8WY54 764 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 JARID2Q92833 1246 aaPredicted RBP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 ZBTB10Q96DT7 871 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 HOMER3Q9NSC5 361 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 RRP15Q9Y3B9 282 aaKnown RBP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 ARIH1Q9Y4X5 557 aaPredicted RBP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 ROCK2O75116 1388 aaKnown RBP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 PIK3R4Q99570 1358 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 VAMP4O75379 141 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 RPL13P26373 211 aaKnown RBP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 CCDC70Q6NSX1 233 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 TAX1BP1Q86VP1 789 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 FNBP4Q8N3X1 1017 aaPredicted RBP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 GOLGA5Q8TBA6 731 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 ANKRD24Q8TF21 1146 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 IQSEC3Q9UPP2 1182 aaPredicted RBP5.79□□□□□ -1.48
RC3H1-202ENST00000367694 PTPRCP08575 1304 aa5.79□□□□□ -1.48
RC3H1-202ENST00000367694 TPM1P09493 284 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 PYGBP11216 843 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 CORO7P57737 925 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 RBBP5Q15291 538 aaKnown RBP5.78□□□□□ -1.48
RC3H1-202ENST00000367694 NOM1Q5C9Z4 860 aaKnown RBP5.78□□□□□ -1.48
RC3H1-202ENST00000367694 SPDYCQ5MJ68 293 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 SPATA21Q7Z572 469 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 SASH1O94885 1247 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 CCNHP51946 323 aaPredicted RBP5.78□□□□□ -1.48
RC3H1-202ENST00000367694 PABPC4Q13310 644 aaKnown RBP eCLIP5.78□□□□□ -1.48
RC3H1-202ENST00000367694 LRRC49Q8IUZ0 686 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 ARMC2Q8NEN0 867 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 CPSF2Q9P2I0 782 aaKnown RBP5.78□□□□□ -1.48
RC3H1-202ENST00000367694 ACAD8Q9UKU7 415 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 N6AMT1Q9Y5N5 214 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 ZMYM4Q5VZL5 1548 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 ERCC6L2Q5T890 1561 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 U2AF1L5P0DN76 240 aaPredicted RBP5.78□□□□□ -1.48
RC3H1-202ENST00000367694 CYP11B2P19099 503 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 NUCB2P80303 420 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 U2AF1Q01081 240 aaKnown RBP eCLIP5.78□□□□□ -1.482e-7■■■□□ 15
RC3H1-202ENST00000367694 KRT72Q14CN4 511 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 WLSQ5T9L3 541 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 C1orf131Q8NDD1 294 aaKnown RBP5.78□□□□□ -1.48
RC3H1-202ENST00000367694 THUMPD2Q9BTF0 503 aaKnown RBP5.78□□□□□ -1.48
RC3H1-202ENST00000367694 TANGO6Q9C0B7 1094 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 MUC3BQ9H195 1237 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 RABL2BQ9UNT1 228 aa5.78□□□□□ -1.48
RC3H1-202ENST00000367694 ARHGAP35Q9NRY4 1499 aa5.77□□□□□ -1.48
RC3H1-202ENST00000367694 MAP3K1Q13233 1512 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 PARNO95453 639 aaKnown RBP5.77□□□□□ -1.49
RC3H1-202ENST00000367694 TCF3P15923 654 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 XBP1P17861 261 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 CLK1P49759 484 aaKnown RBP5.77□□□□□ -1.49
RC3H1-202ENST00000367694 SESN3P58005 492 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 PDE4BQ07343 736 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 VPS37AQ8NEZ2 397 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 PMFBP1Q8TBY8 1022 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 UTP14AQ9BVJ6 771 aaKnown RBP5.77□□□□□ -1.49
RC3H1-202ENST00000367694 SPATS2LQ9NUQ6 558 aaKnown RBP5.77□□□□□ -1.49
RC3H1-202ENST00000367694 CLIP2Q9UDT6 1046 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 GAPVD1Q14C86 1478 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 TDRD9Q8NDG6 1382 aaKnown RBP5.77□□□□□ -1.49
RC3H1-202ENST00000367694 EVC2Q86UK5 1308 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 TRIM64CA6NLI5 447 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 ELF1P32519 619 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 SMYD1Q8NB12 490 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 ERMNQ8TAM6 284 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 EXOC4Q96A65 974 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 GPATCH3Q96I76 525 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 V9GYY5 206 aaPredicted RBP5.77□□□□□ -1.49
RC3H1-202ENST00000367694 BOLA2-SMG1P6H3BVE0 249 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 E2F6O75461 281 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 KRT38O76015 456 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 MTA2O94776 668 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 CCDC175P0C221 793 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 SMARCA1P28370 1054 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 FXNQ16595 210 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 C10orf67Q8IYJ2 551 aa5.77□□□□□ -1.49
RC3H1-202ENST00000367694 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.77□□□□□ -1.49
RC3H1-202ENST00000367694 EME2A4GXA9 379 aaPredicted RBP5.76□□□□□ -1.49
RC3H1-202ENST00000367694 TMEM221A6NGB7 291 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 FAM25EA8MYX2 175 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 RNF20Q5VTR2 975 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 MYSM1Q5VVJ2 828 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 DPY19L2Q6NUT2 758 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 MTHFD1LQ6UB35 978 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 LRRC31Q6UY01 552 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 LMNTD2Q8IXW0 634 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 SMARCC1Q92922 1105 aaPredicted RBP5.76□□□□□ -1.49
RC3H1-202ENST00000367694 SPOCK3Q9BQ16 436 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 SLKQ9H2G2 1235 aaPredicted RBP5.76□□□□□ -1.49
RC3H1-202ENST00000367694 SENP2Q9HC62 589 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 TMEM63CQ9P1W3 806 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 SCINQ9Y6U3 715 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 KDM5BQ9UGL1 1544 aa5.76□□□□□ -1.49
RC3H1-202ENST00000367694 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms